Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3195

Experiment: Def methylglyoxal 0.01 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Def methylglyoxal 0.01 vol%
3,366,844	+				+0.4
3,367,030	+		Psest_3194	0.67	+0.3
3,367,095	-				-0.3
3,367,191	+				+0.6
3,367,191	+				-0.1
3,367,191	+				-0.2
3,367,192	-				+0.3
3,367,199	-				+0.1
3,367,314	+		Psest_3195	0.21	-1.8
3,367,314	+		Psest_3195	0.21	-1.3
3,367,314	+		Psest_3195	0.21	-0.7
3,367,315	-		Psest_3195	0.21	+0.4
3,367,315	-		Psest_3195	0.21	-0.1
3,367,315	-		Psest_3195	0.21	-0.3
3,367,315	-		Psest_3195	0.21	+0.9
3,367,315	-		Psest_3195	0.21	-0.2
3,367,401	-		Psest_3195	0.36	-0.6
3,367,401	-		Psest_3195	0.36	-0.5
3,367,469	+		Psest_3195	0.48	-2.4
3,367,469	+		Psest_3195	0.48	+0.1
3,367,469	+		Psest_3195	0.48	-0.4
3,367,469	+		Psest_3195	0.48	-0.6
3,367,470	-		Psest_3195	0.48	+0.4
3,367,470	-		Psest_3195	0.48	-1.2
3,367,470	-		Psest_3195	0.48	-1.0
3,367,470	-		Psest_3195	0.48	-0.9
3,367,470	-		Psest_3195	0.48	-0.7
3,367,491	+		Psest_3195	0.52	-1.2
3,367,491	+		Psest_3195	0.52	-0.8
3,367,491	+		Psest_3195	0.52	+0.3
3,367,492	-		Psest_3195	0.52	-0.6
3,367,530	+		Psest_3195	0.58	-0.2
3,367,531	-		Psest_3195	0.59	+0.1
3,367,596	+		Psest_3195	0.70	-0.8
3,367,597	-		Psest_3195	0.70	+0.1
3,367,597	-		Psest_3195	0.70	-1.1
3,367,722	+				+0.5
3,367,723	-				-0.5
3,367,723	-				-0.6
3,367,723	-				-0.1
3,367,786	+				+0.1
3,367,885	+				-1.2
3,367,885	+				+0.3
3,367,886	-				+1.2
3,367,886	-				-0.9
3,368,113	+		Psest_3196	0.25	+0.6
3,368,152	+		Psest_3196	0.28	-0.9
3,368,170	+		Psest_3196	0.30	+0.3
3,368,281	+		Psest_3196	0.39	-1.2
3,368,281	+		Psest_3196	0.39	-1.5
3,368,282	-		Psest_3196	0.40	+1.9
3,368,413	-		Psest_3196	0.51	+0.2
3,368,602	+		Psest_3196	0.67	-1.3
3,368,602	+		Psest_3196	0.67	-0.9
3,368,603	-		Psest_3196	0.67	+0.1
3,368,619	+		Psest_3196	0.69	-0.2
3,368,619	+		Psest_3196	0.69	+0.6
3,368,620	-		Psest_3196	0.69	+0.8
3,368,620	-		Psest_3196	0.69	+0.4
3,368,620	-		Psest_3196	0.69	+0.6
3,368,620	-		Psest_3196	0.69	+0.2
3,368,620	-		Psest_3196	0.69	+1.0
3,368,620	-		Psest_3196	0.69	+1.1
3,368,686	+		Psest_3196	0.74	+0.3
3,368,686	+		Psest_3196	0.74	-1.0
3,368,687	-		Psest_3196	0.75	+0.6