Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2089

Experiment: Def methylglyoxal 0.01 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Def methylglyoxal 0.01 vol%
2,215,916	+		Psest_2086	0.79	-0.2
2,215,916	+		Psest_2086	0.79	+0.0
2,216,113	+				+0.1
2,216,113	+				-0.5
2,216,114	-				+0.8
2,216,138	+				+0.2
2,216,139	-				-0.1
2,216,139	-				-0.9
2,216,317	-		Psest_2087	0.79	-0.2
2,216,330	-				-0.4
2,216,330	-				+0.3
2,216,449	+		Psest_2088	0.10	-1.0
2,216,449	+		Psest_2088	0.10	-3.4
2,216,449	+		Psest_2088	0.10	-3.9
2,218,403	+				+2.3
2,218,540	-				-2.3
2,218,540	-				-0.3
2,218,540	-				-0.3
2,218,540	-				-0.9
2,218,540	-				-2.3
2,218,540	-				-1.0
2,218,540	-				-0.0
2,218,540	-				-1.7
2,218,540	-				-1.3
2,218,564	-				+1.2
2,218,564	-				+0.1
2,218,653	-				-0.1
2,218,653	-				+0.5
2,218,683	+				-3.1
2,218,683	+				-1.8
2,218,684	-				+0.3
2,218,722	+				-1.2
2,218,723	-				+0.3
2,218,723	-				+0.9
2,218,730	+				-0.4
2,218,730	+				-1.9
2,218,731	-				+1.3
2,218,750	-				-0.2
2,218,750	-				-0.6
2,218,801	+				-3.6
2,218,801	+				-1.1
2,218,801	+				-2.2
2,218,801	+				-2.2
2,218,801	+				-2.0
2,218,801	+				-3.3
2,218,801	+				-2.6
2,218,802	-				+1.0
2,218,802	-				-1.7
2,218,802	-				-0.0
2,218,855	+				+0.2
2,218,893	+				-1.7
2,218,894	-				+0.9
2,218,894	-				+0.5
2,218,897	+				+0.3
2,218,897	+				-1.4
2,218,897	+				-1.0
2,218,897	+				-0.3
2,218,897	+				-1.4
2,218,898	-				+0.1
2,219,043	+		Psest_2090	0.75	-2.1
2,219,064	+		Psest_2090	0.85	-1.3
2,219,064	+		Psest_2090	0.85	-0.7
2,219,129	-				+0.5
2,219,347	+		Psest_2091	0.21	-1.5
2,219,480	-		Psest_2091	0.46	+0.3