Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_0932

Experiment: Def Carbenicillin 0.02 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Def Carbenicillin 0.02 mg/ml
1,009,119	+				-1.9
1,009,119	+				+0.4
1,009,119	+				+0.6
1,009,120	-				-2.1
1,009,120	-				-2.5
1,009,120	-				+0.9
1,009,120	-				+1.0
1,009,120	-				+1.0
1,009,120	-				-2.0
1,009,123	+				-0.3
1,009,123	+				+0.5
1,009,124	-				+1.2
1,009,124	-				+1.2
1,009,183	+		Psest_0931	0.11	+1.0
1,009,238	+		Psest_0931	0.17	+0.7
1,009,238	+		Psest_0931	0.17	-0.7
1,009,238	+		Psest_0931	0.17	-0.8
1,009,238	+		Psest_0931	0.17	-2.5
1,009,239	-		Psest_0931	0.17	+1.2
1,009,239	-		Psest_0931	0.17	-1.5
1,009,239	-		Psest_0931	0.17	+1.5
1,009,239	-		Psest_0931	0.17	+1.1
1,009,273	+		Psest_0931	0.20	-0.9
1,009,273	+		Psest_0931	0.20	-0.7
1,009,273	+		Psest_0931	0.20	-2.1
1,009,273	+		Psest_0931	0.20	-3.0
1,009,273	+		Psest_0931	0.20	-2.8
1,009,273	+		Psest_0931	0.20	+0.2
1,009,274	-		Psest_0931	0.20	+1.2
1,009,274	-		Psest_0931	0.20	+0.9
1,009,274	-		Psest_0931	0.20	-1.2
1,009,274	-		Psest_0931	0.20	+1.4
1,009,274	-		Psest_0931	0.20	+0.6
1,009,274	-		Psest_0931	0.20	-0.4
1,009,274	-		Psest_0931	0.20	-3.7
1,009,327	+		Psest_0931	0.26	+2.5
1,009,327	+		Psest_0931	0.26	-0.8
1,009,372	+		Psest_0931	0.30	-0.6
1,009,372	+		Psest_0931	0.30	-0.3
1,009,372	+		Psest_0931	0.30	-1.1
1,009,372	+		Psest_0931	0.30	-2.3
1,009,372	+		Psest_0931	0.30	-0.4
1,009,373	-		Psest_0931	0.30	+0.4
1,009,373	-		Psest_0931	0.30	+0.2
1,009,378	-		Psest_0931	0.31	+0.7
1,009,387	-		Psest_0931	0.32	-1.9
1,009,387	-		Psest_0931	0.32	+2.4
1,009,387	-		Psest_0931	0.32	-1.8
1,009,476	+		Psest_0931	0.41	-1.0
1,009,499	+		Psest_0931	0.43	-0.8
1,009,500	-		Psest_0931	0.43	+2.0
1,009,606	+		Psest_0931	0.54	+0.1
1,009,669	-		Psest_0931	0.60	-0.3
1,009,669	-		Psest_0931	0.60	-0.5
1,009,669	-		Psest_0931	0.60	-1.9
1,009,685	-		Psest_0931	0.62	-0.3
1,009,787	-		Psest_0931	0.72	-0.5
1,009,802	-		Psest_0931	0.74	+0.2
1,009,826	+		Psest_0931	0.76	-0.4
1,009,827	-		Psest_0931	0.76	-0.7
1,009,918	-		Psest_0931	0.86	-0.0
1,009,934	+		Psest_0931	0.87	-2.8
1,009,935	-		Psest_0931	0.87	-0.7
1,009,935	-		Psest_0931	0.87	-0.5
1,009,935	-		Psest_0931	0.87	-2.9
1,009,935	-		Psest_0931	0.87	-0.5
1,009,935	-		Psest_0931	0.87	-0.8
1,009,935	-		Psest_0931	0.87	+0.6
1,009,949	+		Psest_0931	0.89	+0.4
1,009,949	+		Psest_0931	0.89	-0.7
1,009,950	-		Psest_0931	0.89	+0.4
1,009,950	-		Psest_0931	0.89	+0.5
1,009,950	-		Psest_0931	0.89	-0.8
1,010,006	-				-0.5
1,010,029	-				+0.9
1,010,029	-				-0.1
1,010,029	-				+0.6
1,010,040	+				-0.2
1,010,245	+		Psest_0932	0.22	-3.8
1,010,246	-		Psest_0932	0.22	+1.4
1,010,246	-		Psest_0932	0.22	-2.2
1,010,246	-		Psest_0932	0.22	-0.4
1,010,246	-		Psest_0932	0.22	-0.7
1,010,310	+		Psest_0932	0.33	-1.8
1,010,310	+		Psest_0932	0.33	-1.4
1,010,310	+		Psest_0932	0.33	-0.6
1,010,310	+		Psest_0932	0.33	-1.5
1,010,311	-		Psest_0932	0.33	+0.3
1,010,311	-		Psest_0932	0.33	+0.1
1,010,396	+		Psest_0932	0.46	-1.2
1,010,397	-		Psest_0932	0.46	+0.8
1,010,397	-		Psest_0932	0.46	+0.8
1,010,401	-		Psest_0932	0.47	-0.9
1,010,401	-		Psest_0932	0.47	-1.8
1,010,401	-		Psest_0932	0.47	-1.3
1,010,401	-		Psest_0932	0.47	-0.4
1,010,407	-		Psest_0932	0.48	-1.3
1,010,541	+		Psest_0932	0.69	-0.5
1,010,541	+		Psest_0932	0.69	-1.0
1,010,542	-		Psest_0932	0.69	-0.3
1,010,545	-		Psest_0932	0.70	+0.6
1,010,553	-		Psest_0932	0.71	-1.7
1,010,559	-		Psest_0932	0.72	+1.8
1,010,559	-		Psest_0932	0.72	+0.7
1,010,730	+				+0.8
1,010,731	-				-3.2
1,010,747	+				+0.7
1,010,818	-				+1.8
1,010,818	-				+0.7
1,010,818	-				-1.7
1,010,853	+				-1.1
1,010,861	+				+0.5
1,010,862	-				-2.6
1,010,881	-				+0.3
1,010,894	-				-3.9
1,010,986	+				-1.7
1,010,986	+				+0.4
1,010,986	+				+0.5
1,010,986	+				-0.3
1,010,987	-				-2.4
1,010,987	-				-0.1
1,010,999	-				-0.7
1,011,055	+				+0.2
1,011,055	+				-1.0
1,011,185	+				-0.8
1,011,185	+				-2.9
1,011,185	+				+0.9
1,011,185	+				+1.3
1,011,185	+				-3.2
1,011,186	-				-0.3
1,011,266	+				-0.8
1,011,266	+				-0.0
1,011,266	+				+0.8
1,011,266	+				+0.6
1,011,266	+				+1.5
1,011,267	-				-1.2
1,011,491	+				-0.6
1,011,492	-				-0.5
1,011,528	+				-0.5
1,011,584	+				-3.0
1,011,584	+				+0.5
1,011,584	+				+1.0
1,011,584	+				+0.6
1,011,584	+				+1.6
1,011,584	+				+1.1
1,011,584	+				-0.0
1,011,584	+				+0.8
1,011,584	+				-0.4
1,011,585	-				-0.3
1,011,585	-				-0.1
1,011,585	-				-0.8
1,011,585	-				+1.0
1,011,585	-				-0.1
1,011,585	-				+0.0
1,011,585	-				-0.0
1,011,585	-				+0.6
1,011,585	-				+1.2
1,011,585	-				+0.3
1,011,585	-				-0.7
1,011,585	-				-0.6
1,011,585	-				+1.3
1,011,585	-				+0.0
1,011,596	+				-1.9
1,011,597	-				+0.7
1,011,597	-				-0.8
1,011,597	-				-2.1
1,011,597	-				-0.6
1,011,597	-				-1.7
1,011,597	-				+0.6
1,011,597	-				-1.4
1,011,597	-				+0.9
1,011,597	-				-1.8
1,011,597	-				-1.2
1,011,597	-				+0.5
1,011,611	+				-2.7
1,011,611	+				+0.4
1,011,611	+				-1.9