Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3813

Experiment: Def Carbenicillin 0.02 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Def Carbenicillin 0.02 mg/ml
3,983,229	+				-2.5
3,983,229	+				-0.5
3,983,230	-				-0.3
3,983,230	-				-2.2
3,983,230	-				+0.4
3,983,530	-		Psest_3812	0.82	+0.3
3,983,530	-		Psest_3812	0.82	+0.2
3,983,605	-				+0.5
3,983,638	+				+1.8
3,983,638	+				+2.1
3,983,638	+				+0.8
3,983,740	-		Psest_3813	0.17	+0.7
3,983,831	+		Psest_3813	0.30	+3.1
3,983,831	+		Psest_3813	0.30	+0.6
3,983,831	+		Psest_3813	0.30	+2.8
3,983,832	-		Psest_3813	0.30	+0.4
3,983,832	-		Psest_3813	0.30	+2.3
3,983,832	-		Psest_3813	0.30	-0.0
3,983,832	-		Psest_3813	0.30	+1.0
3,983,832	-		Psest_3813	0.30	+1.0
3,983,835	+		Psest_3813	0.31	+2.2
3,983,835	+		Psest_3813	0.31	+0.9
3,983,835	+		Psest_3813	0.31	-0.1
3,983,835	+		Psest_3813	0.31	+1.7
3,983,836	-		Psest_3813	0.31	-0.0
3,983,836	-		Psest_3813	0.31	-0.2
3,983,836	-		Psest_3813	0.31	+2.5
3,983,836	-		Psest_3813	0.31	+0.2
3,984,024	+		Psest_3813	0.57	+3.8
3,984,146	+		Psest_3813	0.74	+2.4
3,984,146	+		Psest_3813	0.74	+1.6
3,984,147	-		Psest_3813	0.74	-1.0
3,984,275	+				+1.2
3,984,275	+				+2.2
3,984,275	+				+3.3
3,984,275	+				+2.1
3,984,275	+				+1.2
3,984,275	+				+1.9
3,984,275	+				+1.2
3,984,275	+				-0.8
3,984,275	+				+1.7
3,984,276	-				-1.9
3,984,276	-				+0.5
3,984,276	-				+0.9
3,984,276	-				+1.7
3,984,276	-				-1.5
3,984,276	-				+0.4
3,984,276	-				+1.6
3,984,276	-				+0.3
3,984,276	-				+1.8
3,984,340	+				-2.8
3,984,340	+				+1.1
3,984,341	-				+0.8
3,984,341	-				-2.3
3,984,351	-				+0.1
3,984,372	+				-2.0
3,984,373	-				+0.6
3,984,373	-				-0.3
3,984,373	-				+0.9
3,984,374	+				+0.0
3,984,374	+				+0.3
3,984,374	+				+0.8
3,984,374	+				-1.5
3,984,374	+				-0.0
3,984,374	+				-1.5
3,984,375	-				-0.9
3,984,375	-				-2.3
3,984,385	-				+1.5
3,984,438	+				-0.2
3,984,817	+		Psest_3814	0.38	-2.3