Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1886

Experiment: Def Carbenicillin 0.02 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Def Carbenicillin 0.02 mg/ml
1,994,682	+		Psest_1884	0.52	-1.5
1,994,683	-		Psest_1884	0.52	+0.8
1,994,714	+		Psest_1884	0.56	-0.5
1,994,715	-		Psest_1884	0.56	+4.2
1,994,998	+				+1.6
1,994,998	+				+3.0
1,994,998	+				-1.0
1,994,998	+				-0.8
1,994,998	+				-0.4
1,994,998	+				+0.1
1,994,999	-				-0.3
1,995,078	-		Psest_1885	0.14	-0.4
1,995,210	+		Psest_1885	0.49	-1.2
1,995,316	+		Psest_1885	0.77	+1.3
1,995,317	-		Psest_1885	0.78	+1.1
1,995,317	-		Psest_1885	0.78	+1.3
1,995,346	-		Psest_1885	0.85	-3.2
1,995,346	-		Psest_1885	0.85	+3.8
1,995,412	-				+1.1
1,995,420	-				-2.5
1,995,459	-				+0.3
1,995,510	+		Psest_1886	0.11	-2.2
1,995,511	-		Psest_1886	0.11	-1.3
1,995,534	+		Psest_1886	0.19	+0.4
1,995,535	-		Psest_1886	0.19	+1.0
1,995,536	+		Psest_1886	0.20	-0.2
1,995,537	-		Psest_1886	0.20	+0.0
1,995,537	-		Psest_1886	0.20	+0.4
1,995,537	-		Psest_1886	0.20	-0.3
1,995,537	-		Psest_1886	0.20	-1.9
1,995,538	+		Psest_1886	0.20	-1.9
1,995,538	+		Psest_1886	0.20	-0.9
1,995,538	+		Psest_1886	0.20	+1.6
1,995,539	-		Psest_1886	0.21	-2.1
1,995,539	-		Psest_1886	0.21	+0.2
1,995,539	-		Psest_1886	0.21	-1.2
1,995,769	+				-2.3
1,995,809	-				+1.7
1,995,824	-				+1.0
1,995,909	-				-0.9
1,996,108	+				-1.0
1,996,175	+				-2.4
1,996,178	+				+0.3
1,996,178	+				-0.4
1,996,178	+				-0.8
1,996,178	+				+2.4
1,996,178	+				+1.9
1,996,245	+				-1.2
1,996,381	-		Psest_1887	0.23	+2.8
1,996,404	+		Psest_1887	0.26	+1.2
1,996,404	+		Psest_1887	0.26	+1.8
1,996,404	+		Psest_1887	0.26	+1.9
1,996,404	+		Psest_1887	0.26	+1.0
1,996,404	+		Psest_1887	0.26	+0.7
1,996,404	+		Psest_1887	0.26	+2.4
1,996,404	+		Psest_1887	0.26	+0.3
1,996,405	-		Psest_1887	0.26	-0.6
1,996,405	-		Psest_1887	0.26	+0.1
1,996,405	-		Psest_1887	0.26	+2.5
1,996,405	-		Psest_1887	0.26	-0.3
1,996,405	-		Psest_1887	0.26	+0.6
1,996,405	-		Psest_1887	0.26	-2.0