Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1346

Experiment: Def Carbenicillin 0.02 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Def Carbenicillin 0.02 mg/ml
1,456,938	+		Psest_1345	0.64	+1.2
1,456,938	+		Psest_1345	0.64	+1.5
1,456,938	+		Psest_1345	0.64	-1.7
1,456,938	+		Psest_1345	0.64	-0.7
1,456,938	+		Psest_1345	0.64	-0.1
1,456,938	+		Psest_1345	0.64	+0.4
1,456,938	+		Psest_1345	0.64	+0.0
1,456,938	+		Psest_1345	0.64	-1.5
1,456,938	+		Psest_1345	0.64	-0.9
1,456,938	+		Psest_1345	0.64	-0.1
1,456,938	+		Psest_1345	0.64	-0.5
1,456,938	+		Psest_1345	0.64	+0.3
1,456,938	+		Psest_1345	0.64	+1.3
1,456,938	+		Psest_1345	0.64	+0.9
1,456,938	+		Psest_1345	0.64	+2.5
1,456,938	+		Psest_1345	0.64	+0.3
1,456,938	+		Psest_1345	0.64	+3.4
1,456,938	+		Psest_1345	0.64	-2.7
1,456,938	+		Psest_1345	0.64	-0.2
1,456,938	+		Psest_1345	0.64	+0.2
1,456,939	-		Psest_1345	0.64	-0.5
1,456,939	-		Psest_1345	0.64	-0.0
1,456,939	-		Psest_1345	0.64	-0.1
1,456,939	-		Psest_1345	0.64	-0.0
1,456,939	-		Psest_1345	0.64	-1.1
1,456,939	-		Psest_1345	0.64	+1.5
1,456,939	-		Psest_1345	0.64	+1.9
1,456,939	-		Psest_1345	0.64	-0.3
1,456,939	-		Psest_1345	0.64	+2.7
1,456,939	-		Psest_1345	0.64	+2.7
1,456,939	-		Psest_1345	0.64	-2.0
1,456,939	-		Psest_1345	0.64	+0.5
1,456,939	-		Psest_1345	0.64	-2.2
1,456,939	-		Psest_1345	0.64	+0.7
1,456,939	-		Psest_1345	0.64	+0.2
1,456,939	-		Psest_1345	0.64	-1.3
1,456,939	-		Psest_1345	0.64	-0.5
1,456,996	-		Psest_1345	0.67	+0.5
1,457,275	-		Psest_1345	0.84	+0.9
1,457,364	+		Psest_1345	0.90	+0.9
1,457,364	+		Psest_1345	0.90	-1.8
1,457,364	+		Psest_1345	0.90	+1.3
1,457,364	+		Psest_1345	0.90	-1.6
1,457,364	+		Psest_1345	0.90	+1.3
1,457,364	+		Psest_1345	0.90	-1.7
1,457,364	+		Psest_1345	0.90	+2.4
1,457,364	+		Psest_1345	0.90	-0.2
1,457,365	-		Psest_1345	0.90	+0.6
1,457,365	-		Psest_1345	0.90	+2.2
1,457,365	-		Psest_1345	0.90	+0.5
1,457,365	-		Psest_1345	0.90	-1.3
1,457,365	-		Psest_1345	0.90	-2.3
1,457,365	-		Psest_1345	0.90	-0.5
1,457,403	+				+0.4
1,457,403	+				-2.3
1,457,403	+				-0.7
1,457,404	-				+0.1
1,457,404	-				-2.5
1,457,404	-				+0.9
1,457,404	-				-0.1
1,457,404	-				-0.5
1,457,404	-				-0.9
1,457,689	+				+0.1
1,457,689	+				-0.4
1,457,689	+				-0.1
1,457,691	+				-0.3
1,458,440	-				+0.5
1,458,455	+				-1.4
1,458,513	+				-2.1
1,458,513	+				+0.2
1,458,514	-				-2.3
1,458,514	-				+1.5
1,458,514	-				+0.2
1,458,514	-				-2.2
1,458,514	-				-0.5
1,458,514	-				-1.0
1,458,514	-				-0.9
1,458,514	-				+2.2
1,458,588	+				+0.5
1,458,589	-				-1.5
1,458,591	+				+0.9
1,458,592	-				+1.0
1,458,592	-				+0.6
1,458,592	-				+0.0
1,458,867	+				+0.9
1,458,867	+				-1.8
1,458,867	+				-2.6
1,458,867	+				+1.3
1,458,867	+				+0.6
1,458,867	+				+0.4
1,458,867	+				-0.1
1,458,867	+				-0.5
1,458,867	+				-1.4
1,458,867	+				+0.4
1,458,867	+				+0.7
1,458,867	+				+2.8
1,458,867	+				+2.3
1,458,867	+				+0.8
1,458,867	+				+2.2
1,458,867	+				-3.0
1,458,868	-				-0.7
1,458,868	-				-0.0
1,458,868	-				+0.8
1,458,868	-				+1.0
1,458,868	-				+2.1
1,458,868	-				-0.9
1,458,868	-				+0.5
1,458,868	-				+0.0
1,458,868	-				+1.8
1,458,868	-				+0.2
1,458,868	-				+1.4
1,458,868	-				+1.5
1,458,868	-				+1.1
1,458,868	-				-0.7
1,458,868	-				-0.7
1,458,868	-				-0.5
1,458,868	-				-0.1
1,458,868	-				-0.5
1,458,870	+				-0.1
1,458,870	+				-0.3
1,458,870	+				+1.0
1,458,870	+				+1.8
1,458,870	+				+1.4
1,458,870	+				+0.8
1,458,871	-				-1.2
1,458,871	-				+2.1
1,458,871	-				-0.2
1,458,871	-				-1.7
1,458,871	-				+0.4
1,458,871	-				+1.2
1,458,871	-				-0.4
1,459,062	+		Psest_1348	0.25	+0.9
1,459,062	+		Psest_1348	0.25	-1.3
1,459,062	+		Psest_1348	0.25	+1.3
1,459,062	+		Psest_1348	0.25	-0.4
1,459,062	+		Psest_1348	0.25	+0.7
1,459,062	+		Psest_1348	0.25	-1.1
1,459,063	-		Psest_1348	0.25	-0.8
1,459,063	-		Psest_1348	0.25	-0.2
1,459,129	+		Psest_1348	0.33	+1.4
1,459,130	-		Psest_1348	0.33	+0.3
1,459,180	-		Psest_1348	0.39	+0.6
1,459,200	+		Psest_1348	0.41	+1.9
1,459,285	-		Psest_1348	0.52	+2.6
1,459,285	-		Psest_1348	0.52	-1.0