Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1025

Experiment: Def Carbenicillin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Def Carbenicillin 0.008 mg/ml
1,110,950	+		Psest_1024	0.38	-1.1
1,110,950	+		Psest_1024	0.38	-0.5
1,110,950	+		Psest_1024	0.38	-0.8
1,110,951	-		Psest_1024	0.38	+1.1
1,111,005	-		Psest_1024	0.43	-0.3
1,111,106	+		Psest_1024	0.53	+1.5
1,111,106	+		Psest_1024	0.53	+1.5
1,111,106	+		Psest_1024	0.53	+0.7
1,111,106	+		Psest_1024	0.53	+1.4
1,111,107	-		Psest_1024	0.53	+1.1
1,111,175	+		Psest_1024	0.59	+0.3
1,111,175	+		Psest_1024	0.59	+0.4
1,111,175	+		Psest_1024	0.59	+0.7
1,111,175	+		Psest_1024	0.59	+1.2
1,111,175	+		Psest_1024	0.59	+1.0
1,111,175	+		Psest_1024	0.59	+1.3
1,111,176	-		Psest_1024	0.59	-0.1
1,111,176	-		Psest_1024	0.59	+0.1
1,111,176	-		Psest_1024	0.59	+0.8
1,111,179	+		Psest_1024	0.60	+1.6
1,111,179	+		Psest_1024	0.60	+2.5
1,111,179	+		Psest_1024	0.60	+1.6
1,111,179	+		Psest_1024	0.60	+0.6
1,111,179	+		Psest_1024	0.60	+1.9
1,111,180	-		Psest_1024	0.60	+1.5
1,111,180	-		Psest_1024	0.60	-0.5
1,111,180	-		Psest_1024	0.60	+0.1
1,111,180	-		Psest_1024	0.60	-1.2
1,111,263	+		Psest_1024	0.68	+1.1
1,111,263	+		Psest_1024	0.68	+0.6
1,111,263	+		Psest_1024	0.68	+1.7
1,111,263	+		Psest_1024	0.68	+1.3
1,111,264	-		Psest_1024	0.68	-1.1
1,111,264	-		Psest_1024	0.68	-1.5
1,111,264	-		Psest_1024	0.68	-0.5
1,111,416	+		Psest_1024	0.82	+0.9
1,111,417	-		Psest_1024	0.83	-2.7
1,111,572	-				-0.3
1,111,572	-				-1.0
1,111,618	-				+0.3
1,111,808	+		Psest_1025	0.27	-0.9
1,111,808	+		Psest_1025	0.27	+0.3
1,111,808	+		Psest_1025	0.27	+0.2
1,111,809	-		Psest_1025	0.28	-0.1
1,111,983	+		Psest_1025	0.50	+0.4
1,111,983	+		Psest_1025	0.50	+1.9
1,111,983	+		Psest_1025	0.50	+1.4
1,111,983	+		Psest_1025	0.50	+1.4
1,111,983	+		Psest_1025	0.50	+1.3
1,111,984	-		Psest_1025	0.50	+0.5
1,111,984	-		Psest_1025	0.50	-0.1
1,111,984	-		Psest_1025	0.50	+0.1
1,111,984	-		Psest_1025	0.50	+1.0
1,111,987	+		Psest_1025	0.51	+1.8
1,112,072	+		Psest_1025	0.62	-2.1
1,112,072	+		Psest_1025	0.62	+1.2
1,112,072	+		Psest_1025	0.62	-0.7
1,112,073	-		Psest_1025	0.62	-0.9
1,112,073	-		Psest_1025	0.62	-1.1
1,112,073	-		Psest_1025	0.62	-0.1
1,112,075	+		Psest_1025	0.62	+3.0
1,112,389	+				+1.0
1,112,389	+				+0.5
1,112,390	-				-1.1
1,112,390	-				-0.3
1,112,390	-				+0.1
1,112,516	+		Psest_1026	0.16	+1.0
1,112,516	+		Psest_1026	0.16	+0.3
1,112,550	+		Psest_1026	0.20	+1.4
1,112,551	-		Psest_1026	0.20	-0.4
1,112,657	-		Psest_1026	0.32	-0.7
1,112,784	+		Psest_1026	0.46	-0.8
1,113,136	+		Psest_1026	0.86	+1.0
1,113,193	-				-0.9
1,113,202	-				-2.5
1,113,203	+				+2.3
1,113,203	+				+0.4
1,113,204	-				-0.5
1,113,204	-				-1.1
1,113,274	+				+1.0
1,113,274	+				-1.0
1,113,275	-				+0.0
1,113,275	-				+0.8