Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_4111

Experiment: Def Carbenicillin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Def Carbenicillin 0.008 mg/ml
4,294,173	+		Psest_4110	0.43	-2.6
4,294,174	-		Psest_4110	0.43	+1.0
4,294,174	-		Psest_4110	0.43	-1.6
4,294,188	-		Psest_4110	0.44	-1.6
4,294,188	-		Psest_4110	0.44	-1.0
4,294,238	+		Psest_4110	0.47	-1.1
4,294,239	-		Psest_4110	0.47	-2.0
4,294,239	-		Psest_4110	0.47	-1.6
4,294,248	+		Psest_4110	0.48	-2.5
4,294,248	+		Psest_4110	0.48	+1.0
4,294,267	+		Psest_4110	0.49	-1.2
4,294,267	+		Psest_4110	0.49	-0.3
4,294,268	-		Psest_4110	0.49	-1.0
4,294,268	-		Psest_4110	0.49	-0.9
4,294,304	+		Psest_4110	0.51	-1.9
4,294,304	+		Psest_4110	0.51	-2.3
4,294,397	-		Psest_4110	0.57	-1.5
4,294,398	+		Psest_4110	0.57	-0.9
4,294,398	+		Psest_4110	0.57	-2.1
4,294,398	+		Psest_4110	0.57	-1.6
4,294,399	-		Psest_4110	0.57	-2.3
4,294,399	-		Psest_4110	0.57	-2.8
4,294,399	-		Psest_4110	0.57	-2.2
4,294,511	+		Psest_4110	0.64	-1.7
4,294,674	+		Psest_4110	0.75	-2.2
4,294,674	+		Psest_4110	0.75	-0.7
4,294,674	+		Psest_4110	0.75	-1.5
4,294,674	+		Psest_4110	0.75	-1.4
4,294,674	+		Psest_4110	0.75	-2.5
4,294,675	-		Psest_4110	0.75	-1.6
4,294,741	+		Psest_4110	0.79	-1.2
4,294,742	-		Psest_4110	0.79	-0.1
4,294,767	-		Psest_4110	0.80	-2.7
4,294,922	+				-2.6
4,294,922	+				-0.7
4,294,923	-				-1.2
4,295,001	+				-0.7
4,295,001	+				-0.1
4,295,001	+				+0.2
4,295,092	-				-1.0
4,295,096	-				-1.4
4,295,117	+				-0.9
4,295,166	+				-1.7
4,295,167	-				-3.9
4,295,167	-				-0.8
4,295,215	+		Psest_4111	0.18	-1.6
4,295,312	+		Psest_4111	0.36	-1.3
4,295,312	+		Psest_4111	0.36	-1.9
4,295,312	+		Psest_4111	0.36	-0.2
4,295,312	+		Psest_4111	0.36	+0.6
4,295,312	+		Psest_4111	0.36	-1.7
4,295,312	+		Psest_4111	0.36	-1.3
4,295,312	+		Psest_4111	0.36	-1.4
4,295,312	+		Psest_4111	0.36	-2.1
4,295,312	+		Psest_4111	0.36	-1.9
4,295,312	+		Psest_4111	0.36	-0.4
4,295,313	-		Psest_4111	0.36	-0.6
4,295,313	-		Psest_4111	0.36	-1.7
4,295,313	-		Psest_4111	0.36	-0.8
4,295,313	-		Psest_4111	0.36	-1.5
4,295,313	-		Psest_4111	0.36	-1.0
4,295,313	-		Psest_4111	0.36	-0.7
4,295,313	-		Psest_4111	0.36	-1.7
4,295,313	-		Psest_4111	0.36	-2.0
4,295,313	-		Psest_4111	0.36	+0.7
4,295,359	-		Psest_4111	0.44	-0.4
4,295,359	-		Psest_4111	0.44	-1.4
4,295,419	+		Psest_4111	0.55	-1.1
4,295,419	+		Psest_4111	0.55	-1.6
4,295,419	+		Psest_4111	0.55	-0.8
4,295,419	+		Psest_4111	0.55	-1.2
4,295,419	+		Psest_4111	0.55	-2.1
4,295,419	+		Psest_4111	0.55	-2.0
4,295,419	+		Psest_4111	0.55	-1.2
4,295,419	+		Psest_4111	0.55	+0.1
4,295,420	-		Psest_4111	0.55	-1.8
4,295,420	-		Psest_4111	0.55	-0.7
4,295,420	-		Psest_4111	0.55	-0.5
4,295,420	-		Psest_4111	0.55	-0.0
4,295,422	+		Psest_4111	0.55	-0.7
4,295,423	-		Psest_4111	0.56	-1.9
4,295,554	+		Psest_4111	0.79	-0.0
4,295,606	-		Psest_4111	0.89	-0.2
4,295,606	-		Psest_4111	0.89	-2.2
4,295,636	+				-3.5
4,295,637	-				-0.5
4,295,637	-				-1.1
4,295,637	-				-2.9
4,295,667	+				-3.4
4,295,667	+				-1.1
4,295,667	+				-2.7
4,295,667	+				-3.5
4,295,667	+				-0.8
4,295,668	-				-0.7
4,295,668	-				-3.7
4,295,668	-				+0.3
4,296,003	-				-1.1
4,296,102	-				-0.1
4,296,104	-				-2.3
4,296,104	-				-1.7
4,296,104	-				-0.4
4,296,116	-				-1.5
4,296,116	-				-1.9
4,296,116	-				-1.8
4,296,116	-				-0.6
4,296,116	-				-2.1
4,296,116	-				-2.1
4,296,116	-				-1.5
4,296,116	-				-1.2
4,296,150	+				-2.8
4,296,264	-		Psest_4113	0.59	-0.1
4,296,264	-		Psest_4113	0.59	+0.4
4,296,290	+		Psest_4113	0.71	+1.4
4,296,290	+		Psest_4113	0.71	+2.0
4,296,290	+		Psest_4113	0.71	+1.2
4,296,290	+		Psest_4113	0.71	+2.1
4,296,290	+		Psest_4113	0.71	+2.0
4,296,290	+		Psest_4113	0.71	+1.5
4,296,290	+		Psest_4113	0.71	+1.5
4,296,290	+		Psest_4113	0.71	+1.4
4,296,290	+		Psest_4113	0.71	+2.1
4,296,290	+		Psest_4113	0.71	+2.5
4,296,290	+		Psest_4113	0.71	+2.4
4,296,290	+		Psest_4113	0.71	+2.5
4,296,290	+		Psest_4113	0.71	+2.1
4,296,290	+		Psest_4113	0.71	+2.2
4,296,291	-		Psest_4113	0.71	-2.1
4,296,291	-		Psest_4113	0.71	-0.9
4,296,291	-		Psest_4113	0.71	-3.9
4,296,291	-		Psest_4113	0.71	-2.9
4,296,291	-		Psest_4113	0.71	-1.8
4,296,291	-		Psest_4113	0.71	-0.8
4,296,291	-		Psest_4113	0.71	-2.4
4,296,291	-		Psest_4113	0.71	-1.0
4,296,320	-		Psest_4113	0.85	-0.8
4,296,391	+				-0.7
4,296,391	+				-0.1
4,296,391	+				-1.0
4,296,391	+				-1.2
4,296,391	+				-0.7
4,296,391	+				-1.5
4,296,391	+				-1.0
4,296,391	+				-0.2
4,296,391	+				-0.6
4,296,391	+				+1.6
4,296,391	+				+0.1
4,296,391	+				-0.1
4,296,391	+				-1.9
4,296,391	+				-1.7
4,296,391	+				-1.4
4,296,391	+				+0.5
4,296,392	-				-0.0
4,296,392	-				-2.8
4,296,392	-				-1.9
4,296,392	-				-1.5
4,296,392	-				-1.2
4,296,392	-				-2.4
4,296,392	-				-0.2
4,296,392	-				-1.0
4,296,392	-				-1.5
4,296,392	-				-1.8
4,296,392	-				-1.2
4,296,392	-				-2.3
4,296,411	-				-0.0
4,296,613	+		Psest_4114	0.65	-1.0
4,296,614	-		Psest_4114	0.65	+2.0