Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3990

Experiment: Def Carbenicillin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Def Carbenicillin 0.008 mg/ml
4,159,185	-		Psest_3989	0.12	-0.2
4,159,330	+		Psest_3989	0.28	+1.3
4,159,330	+		Psest_3989	0.28	-0.5
4,159,330	+		Psest_3989	0.28	-1.4
4,159,359	+		Psest_3989	0.31	-0.3
4,159,359	+		Psest_3989	0.31	-0.7
4,159,359	+		Psest_3989	0.31	-0.8
4,159,359	+		Psest_3989	0.31	-0.5
4,159,360	-		Psest_3989	0.32	+0.5
4,159,360	-		Psest_3989	0.32	-0.6
4,159,389	-		Psest_3989	0.35	+0.2
4,159,543	+		Psest_3989	0.52	-0.7
4,159,543	+		Psest_3989	0.52	-1.7
4,159,543	+		Psest_3989	0.52	-1.3
4,159,543	+		Psest_3989	0.52	-3.2
4,159,543	+		Psest_3989	0.52	-2.3
4,159,543	+		Psest_3989	0.52	-0.5
4,159,543	+		Psest_3989	0.52	-0.4
4,159,543	+		Psest_3989	0.52	-0.1
4,159,544	-		Psest_3989	0.52	-0.5
4,159,544	-		Psest_3989	0.52	+1.1
4,159,544	-		Psest_3989	0.52	-0.8
4,159,544	-		Psest_3989	0.52	+0.2
4,159,693	+		Psest_3989	0.69	+0.2
4,159,903	-				-0.8
4,160,124	+				-1.1
4,160,125	-				-1.2
4,160,125	-				-0.9
4,160,159	+				-0.7
4,160,160	-				-1.5
4,160,160	-				-3.3
4,160,160	-				-1.9
4,160,222	+				-1.1
4,160,222	+				-0.8
4,160,222	+				-1.5
4,160,222	+				-2.4
4,160,223	-				-0.7
4,160,223	-				-2.3
4,160,223	-				-2.0
4,160,223	-				-0.3
4,160,223	-				-1.7
4,160,223	-				-1.4
4,160,223	-				-0.8
4,160,223	-				-1.7
4,160,364	+		Psest_3990	0.25	-0.1
4,160,364	+		Psest_3990	0.25	-0.5
4,160,364	+		Psest_3990	0.25	-3.3
4,160,364	+		Psest_3990	0.25	-1.2
4,160,486	+		Psest_3990	0.41	-2.5
4,160,486	+		Psest_3990	0.41	-2.1
4,160,487	-		Psest_3990	0.41	-1.8
4,160,575	+		Psest_3990	0.52	-2.6
4,160,726	+		Psest_3990	0.71	-2.0
4,160,727	-		Psest_3990	0.71	-1.6
4,160,727	-		Psest_3990	0.71	+2.1
4,160,729	+		Psest_3990	0.71	-1.7
4,160,729	+		Psest_3990	0.71	-1.6
4,160,730	-		Psest_3990	0.71	-2.0
4,160,730	-		Psest_3990	0.71	-1.4
4,160,730	-		Psest_3990	0.71	-0.5
4,160,730	-		Psest_3990	0.71	-2.3
4,160,730	-		Psest_3990	0.71	-4.6
4,160,730	-		Psest_3990	0.71	-1.5
4,160,730	-		Psest_3990	0.71	-1.3
4,160,840	-		Psest_3990	0.85	-1.5
4,160,918	+				-0.9
4,160,918	+				+0.9
4,160,918	+				-0.7
4,160,953	+				+0.6
4,161,097	+		Psest_3991	0.36	-0.9
4,161,097	+		Psest_3991	0.36	-0.6
4,161,097	+		Psest_3991	0.36	-1.3
4,161,098	-		Psest_3991	0.37	+0.7
4,161,361	+				-1.1
4,161,361	+				+1.0
4,161,361	+				-2.9
4,161,362	-				-0.2
4,161,362	-				-1.0
4,161,362	-				-0.6
4,161,368	+				+1.4
4,161,368	+				+0.3
4,161,368	+				-0.1
4,161,368	+				-2.3
4,161,369	-				-0.8
4,161,369	-				+1.6
4,161,380	+				-2.1
4,161,381	-				+0.2
4,161,381	-				+0.2
4,161,381	-				+0.9
4,161,388	+				-0.2
4,161,389	-				-0.4
4,161,389	-				+0.2
4,161,389	-				-2.0
4,161,389	-				-0.7
4,161,389	-				-2.7
4,161,389	-				-0.1
4,161,420	+				-1.6
4,161,421	-				-0.3
4,161,421	-				-1.7
4,161,421	-				-0.2
4,161,421	-				-2.2
4,161,556	+		Psest_3992	0.22	-0.9
4,161,556	+		Psest_3992	0.22	-2.0
4,161,725	+		Psest_3992	0.58	+0.3
4,161,726	-		Psest_3992	0.59	-0.9
4,161,726	-		Psest_3992	0.59	-0.6
4,161,726	-		Psest_3992	0.59	-1.7
4,161,726	-		Psest_3992	0.59	-0.4
4,161,726	-		Psest_3992	0.59	-0.8
4,161,872	+		Psest_3992	0.90	-0.3
4,161,872	+		Psest_3992	0.90	-0.7
4,161,872	+		Psest_3992	0.90	+0.7
4,161,872	+		Psest_3992	0.90	-1.5
4,161,872	+		Psest_3992	0.90	+0.1
4,161,872	+		Psest_3992	0.90	-0.9
4,161,872	+		Psest_3992	0.90	-0.2
4,161,872	+		Psest_3992	0.90	-1.6
4,161,872	+		Psest_3992	0.90	-0.4
4,161,872	+		Psest_3992	0.90	-0.1
4,161,872	+		Psest_3992	0.90	-1.5
4,161,872	+		Psest_3992	0.90	+1.7
4,161,872	+		Psest_3992	0.90	-1.0
4,161,872	+		Psest_3992	0.90	-0.3
4,161,872	+		Psest_3992	0.90	+2.3
4,161,872	+		Psest_3992	0.90	+0.5
4,161,873	-				+0.2
4,161,873	-				+0.1
4,161,873	-				-0.4
4,161,873	-				-0.4
4,161,873	-				-0.4
4,161,873	-				+0.6
4,161,873	-				-1.1
4,161,873	-				-2.0
4,161,873	-				+0.6
4,161,873	-				-3.0
4,161,873	-				-0.4
4,161,873	-				+0.1
4,161,873	-				-0.9
4,161,873	-				+0.9
4,161,873	-				+2.2
4,161,873	-				-0.2
4,161,873	-				+0.8
4,161,873	-				-0.5
4,161,873	-				-1.4
4,161,873	-				-0.1
4,161,873	-				-1.0
4,161,873	-				-0.2
4,161,873	-				-1.5
4,161,873	-				+0.3
4,161,873	-				-0.1
4,161,873	-				+0.1
4,161,873	-				+0.3
4,161,873	-				-1.1
4,161,873	-				+1.9
4,161,873	-				+0.6
4,161,873	-				-1.8
4,161,873	-				-0.4
4,161,873	-				-0.7
4,161,873	-				+0.1
4,161,874	+				-2.4
4,161,952	+				-1.3
4,161,952	+				+1.7
4,161,953	-				-2.3
4,161,953	-				-1.3