Experiment: Def Carbenicillin 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_3862 and Psest_3863 are separated by 24 nucleotides Psest_3863 and Psest_3864 are separated by 181 nucleotides Psest_3864 and Psest_3865 are separated by 33 nucleotides Psest_3865 and Psest_3866 are separated by 20 nucleotides
Psest_3862: Psest_3862 - phosphoenolpyruvate-protein phosphotransferase, at 4,033,213 to 4,035,486
_3862
Psest_3863: Psest_3863 - NTP pyrophosphohydrolases including oxidative damage repair enzymes, at 4,035,511 to 4,035,990
_3863
Psest_3864: Psest_3864 - Histidinol-phosphatase (EC:3.1.3.15) (from data) , at 4,036,172 to 4,036,825
_3864
Psest_3865: Psest_3865 - Predicted integral membrane protein (DUF2269)., at 4,036,859 to 4,037,287
_3865
Psest_3866: Psest_3866 - threonine ammonia-lyase, biosynthetic, long form, at 4,037,308 to 4,038,822
_3866
Position (kb)
4036
4037 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 4035.194 kb on + strand, within Psest_3862 at 4035.194 kb on + strand, within Psest_3862 at 4035.194 kb on + strand, within Psest_3862 at 4035.194 kb on + strand, within Psest_3862 at 4035.365 kb on + strand at 4035.365 kb on + strand at 4035.365 kb on + strand at 4035.365 kb on + strand at 4035.366 kb on - strand at 4035.996 kb on - strand at 4035.996 kb on - strand at 4036.042 kb on + strand at 4036.132 kb on + strand at 4036.186 kb on - strand at 4036.241 kb on + strand, within Psest_3864 at 4036.241 kb on + strand, within Psest_3864 at 4036.242 kb on - strand, within Psest_3864 at 4036.277 kb on + strand, within Psest_3864 at 4036.277 kb on + strand, within Psest_3864 at 4036.277 kb on + strand, within Psest_3864 at 4036.278 kb on - strand, within Psest_3864 at 4036.301 kb on + strand, within Psest_3864 at 4036.301 kb on + strand, within Psest_3864 at 4036.301 kb on + strand, within Psest_3864 at 4036.301 kb on + strand, within Psest_3864 at 4036.301 kb on + strand, within Psest_3864 at 4036.302 kb on - strand, within Psest_3864 at 4036.302 kb on - strand, within Psest_3864 at 4036.302 kb on - strand, within Psest_3864 at 4036.302 kb on - strand, within Psest_3864 at 4036.302 kb on - strand, within Psest_3864 at 4036.310 kb on + strand, within Psest_3864 at 4036.310 kb on + strand, within Psest_3864 at 4036.310 kb on + strand, within Psest_3864 at 4036.310 kb on + strand, within Psest_3864 at 4036.311 kb on - strand, within Psest_3864 at 4036.596 kb on - strand, within Psest_3864 at 4036.694 kb on + strand, within Psest_3864 at 4036.694 kb on + strand, within Psest_3864 at 4036.694 kb on + strand, within Psest_3864 at 4036.694 kb on + strand, within Psest_3864 at 4036.694 kb on + strand, within Psest_3864 at 4036.694 kb on + strand, within Psest_3864 at 4036.694 kb on + strand, within Psest_3864 at 4036.694 kb on + strand, within Psest_3864 at 4036.694 kb on + strand, within Psest_3864 at 4036.694 kb on + strand, within Psest_3864 at 4036.694 kb on + strand, within Psest_3864 at 4036.694 kb on + strand, within Psest_3864 at 4036.694 kb on + strand, within Psest_3864 at 4036.695 kb on - strand, within Psest_3864 at 4036.695 kb on - strand, within Psest_3864 at 4036.695 kb on - strand, within Psest_3864 at 4036.695 kb on - strand, within Psest_3864 at 4036.695 kb on - strand, within Psest_3864 at 4036.695 kb on - strand, within Psest_3864 at 4036.695 kb on - strand, within Psest_3864 at 4036.695 kb on - strand, within Psest_3864 at 4036.695 kb on - strand, within Psest_3864 at 4036.695 kb on - strand, within Psest_3864 at 4036.695 kb on - strand, within Psest_3864 at 4036.695 kb on - strand, within Psest_3864 at 4036.700 kb on + strand, within Psest_3864 at 4036.700 kb on + strand, within Psest_3864 at 4036.700 kb on + strand, within Psest_3864 at 4036.700 kb on + strand, within Psest_3864 at 4036.700 kb on + strand, within Psest_3864 at 4036.700 kb on + strand, within Psest_3864 at 4036.700 kb on + strand, within Psest_3864 at 4036.700 kb on + strand, within Psest_3864 at 4036.700 kb on + strand, within Psest_3864 at 4036.700 kb on + strand, within Psest_3864 at 4036.701 kb on - strand, within Psest_3864 at 4036.701 kb on - strand, within Psest_3864 at 4036.701 kb on - strand, within Psest_3864 at 4036.701 kb on - strand, within Psest_3864 at 4036.923 kb on + strand, within Psest_3865 at 4036.923 kb on + strand, within Psest_3865 at 4036.924 kb on - strand, within Psest_3865 at 4036.924 kb on - strand, within Psest_3865 at 4036.924 kb on - strand, within Psest_3865 at 4036.924 kb on - strand, within Psest_3865 at 4036.928 kb on - strand, within Psest_3865 at 4036.937 kb on - strand, within Psest_3865 at 4036.937 kb on - strand, within Psest_3865 at 4037.268 kb on - strand at 4037.268 kb on - strand at 4037.278 kb on - strand at 4037.278 kb on - strand at 4037.278 kb on - strand at 4037.278 kb on - strand at 4037.278 kb on - strand at 4037.299 kb on + strand at 4037.299 kb on + strand at 4037.299 kb on + strand at 4037.300 kb on - strand at 4037.300 kb on - strand at 4037.300 kb on - strand at 4037.327 kb on + strand at 4037.327 kb on + strand at 4037.327 kb on + strand at 4037.328 kb on - strand at 4037.328 kb on - strand at 4037.328 kb on - strand at 4037.428 kb on + strand at 4037.742 kb on - strand, within Psest_3866
Per-strain Table
Position Strand Gene LocusTag Fraction Def Carbenicillin 0.008 mg/ml remove 4,035,194 + Psest_3862 0.87 +0.8 4,035,194 + Psest_3862 0.87 +0.1 4,035,194 + Psest_3862 0.87 +0.9 4,035,194 + Psest_3862 0.87 +1.0 4,035,365 + +1.1 4,035,365 + +0.5 4,035,365 + +0.9 4,035,365 + -0.1 4,035,366 - +0.8 4,035,996 - -1.1 4,035,996 - -2.9 4,036,042 + +1.2 4,036,132 + -0.4 4,036,186 - -2.8 4,036,241 + Psest_3864 0.11 -3.3 4,036,241 + Psest_3864 0.11 -2.7 4,036,242 - Psest_3864 0.11 -3.8 4,036,277 + Psest_3864 0.16 -4.1 4,036,277 + Psest_3864 0.16 -4.4 4,036,277 + Psest_3864 0.16 -2.3 4,036,278 - Psest_3864 0.16 -2.8 4,036,301 + Psest_3864 0.20 -4.2 4,036,301 + Psest_3864 0.20 -1.5 4,036,301 + Psest_3864 0.20 -1.6 4,036,301 + Psest_3864 0.20 -3.3 4,036,301 + Psest_3864 0.20 -3.1 4,036,302 - Psest_3864 0.20 -3.3 4,036,302 - Psest_3864 0.20 -1.6 4,036,302 - Psest_3864 0.20 -2.3 4,036,302 - Psest_3864 0.20 -3.6 4,036,302 - Psest_3864 0.20 -2.9 4,036,310 + Psest_3864 0.21 -2.3 4,036,310 + Psest_3864 0.21 -2.3 4,036,310 + Psest_3864 0.21 -1.8 4,036,310 + Psest_3864 0.21 -0.9 4,036,311 - Psest_3864 0.21 -1.4 4,036,596 - Psest_3864 0.65 -2.5 4,036,694 + Psest_3864 0.80 -3.0 4,036,694 + Psest_3864 0.80 -1.2 4,036,694 + Psest_3864 0.80 -3.5 4,036,694 + Psest_3864 0.80 -2.1 4,036,694 + Psest_3864 0.80 -2.9 4,036,694 + Psest_3864 0.80 -4.3 4,036,694 + Psest_3864 0.80 -1.6 4,036,694 + Psest_3864 0.80 -2.4 4,036,694 + Psest_3864 0.80 -3.1 4,036,694 + Psest_3864 0.80 -1.7 4,036,694 + Psest_3864 0.80 -0.9 4,036,694 + Psest_3864 0.80 -3.2 4,036,694 + Psest_3864 0.80 -2.9 4,036,695 - Psest_3864 0.80 -2.1 4,036,695 - Psest_3864 0.80 -3.1 4,036,695 - Psest_3864 0.80 -2.2 4,036,695 - Psest_3864 0.80 -3.2 4,036,695 - Psest_3864 0.80 -1.3 4,036,695 - Psest_3864 0.80 -4.2 4,036,695 - Psest_3864 0.80 -2.0 4,036,695 - Psest_3864 0.80 -4.4 4,036,695 - Psest_3864 0.80 -3.2 4,036,695 - Psest_3864 0.80 -2.1 4,036,695 - Psest_3864 0.80 -0.9 4,036,695 - Psest_3864 0.80 -4.1 4,036,700 + Psest_3864 0.81 -3.4 4,036,700 + Psest_3864 0.81 -3.1 4,036,700 + Psest_3864 0.81 -2.2 4,036,700 + Psest_3864 0.81 -3.2 4,036,700 + Psest_3864 0.81 -3.3 4,036,700 + Psest_3864 0.81 -1.6 4,036,700 + Psest_3864 0.81 -3.6 4,036,700 + Psest_3864 0.81 -3.2 4,036,700 + Psest_3864 0.81 -2.4 4,036,700 + Psest_3864 0.81 -3.4 4,036,701 - Psest_3864 0.81 -2.1 4,036,701 - Psest_3864 0.81 -3.6 4,036,701 - Psest_3864 0.81 -0.9 4,036,701 - Psest_3864 0.81 -3.1 4,036,923 + Psest_3865 0.15 -0.8 4,036,923 + Psest_3865 0.15 +0.0 4,036,924 - Psest_3865 0.15 +1.3 4,036,924 - Psest_3865 0.15 +0.9 4,036,924 - Psest_3865 0.15 +1.1 4,036,924 - Psest_3865 0.15 -0.9 4,036,928 - Psest_3865 0.16 -0.2 4,036,937 - Psest_3865 0.18 +0.2 4,036,937 - Psest_3865 0.18 -0.3 4,037,268 - +0.7 4,037,268 - +1.7 4,037,278 - -1.0 4,037,278 - +0.9 4,037,278 - +0.6 4,037,278 - +1.0 4,037,278 - +0.5 4,037,299 + -0.8 4,037,299 + +0.2 4,037,299 + +0.6 4,037,300 - +0.5 4,037,300 - -1.2 4,037,300 - +0.6 4,037,327 + -1.4 4,037,327 + -1.8 4,037,327 + -1.0 4,037,328 - -3.3 4,037,328 - -2.7 4,037,328 - -3.4 4,037,428 + -2.8 4,037,742 - Psest_3866 0.29 -4.2
Or see this region's nucleotide sequence