Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3384

Experiment: Def Carbenicillin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Def Carbenicillin 0.008 mg/ml
3,553,571	+				+1.3
3,553,572	-				-1.5
3,553,572	-				-2.0
3,554,000	+				-1.5
3,554,164	-		Psest_3383	0.17	-0.4
3,554,164	-		Psest_3383	0.17	-0.5
3,554,183	-		Psest_3383	0.21	-0.3
3,554,228	+		Psest_3383	0.31	-1.7
3,554,229	-		Psest_3383	0.31	-2.6
3,554,385	+		Psest_3383	0.65	-1.5
3,554,385	+		Psest_3383	0.65	-0.4
3,554,386	-		Psest_3383	0.65	+0.2
3,554,467	+		Psest_3383	0.82	-1.0
3,554,533	+				-1.6
3,554,585	+				-2.9
3,554,585	+				-3.9
3,554,586	-				-0.9
3,554,586	-				-1.8
3,554,586	-				-1.4
3,554,586	-				-3.2
3,554,586	-				-1.0
3,554,586	-				-0.4
3,554,586	-				-2.1
3,554,586	-				-3.0
3,554,606	-				-3.0
3,554,606	-				-2.3
3,554,606	-				+0.4
3,554,671	+		Psest_3384	0.10	-2.4
3,554,671	+		Psest_3384	0.10	-2.7
3,554,671	+		Psest_3384	0.10	-2.4
3,554,672	-		Psest_3384	0.10	-1.4
3,554,672	-		Psest_3384	0.10	-1.5
3,554,672	-		Psest_3384	0.10	-1.1
3,554,672	-		Psest_3384	0.10	-2.0
3,554,672	-		Psest_3384	0.10	-2.1
3,554,672	-		Psest_3384	0.10	-1.7
3,554,672	-		Psest_3384	0.10	-0.5
3,554,672	-		Psest_3384	0.10	-3.2
3,554,672	-		Psest_3384	0.10	-1.0
3,554,672	-		Psest_3384	0.10	-2.0
3,554,672	-		Psest_3384	0.10	-0.9
3,554,672	-		Psest_3384	0.10	-2.6
3,554,672	-		Psest_3384	0.10	-1.1
3,554,672	-		Psest_3384	0.10	-1.8
3,554,672	-		Psest_3384	0.10	-3.9
3,554,672	-		Psest_3384	0.10	-1.4
3,554,672	-		Psest_3384	0.10	-2.6
3,554,692	-		Psest_3384	0.12	-1.9
3,554,972	+		Psest_3384	0.37	-3.3
3,554,973	-		Psest_3384	0.37	-2.7
3,554,973	-		Psest_3384	0.37	-2.1
3,554,973	-		Psest_3384	0.37	-1.1
3,554,973	-		Psest_3384	0.37	-1.2
3,554,973	-		Psest_3384	0.37	-3.7
3,554,973	-		Psest_3384	0.37	-0.9
3,554,973	-		Psest_3384	0.37	-2.0
3,554,973	-		Psest_3384	0.37	-2.3
3,555,296	+		Psest_3384	0.66	-1.1
3,555,297	-		Psest_3384	0.66	-3.3
3,555,306	-		Psest_3384	0.67	-1.0
3,555,323	-		Psest_3384	0.69	-1.9
3,555,687	+				-1.5
3,555,687	+				-2.7
3,555,687	+				-2.3
3,555,688	-				+0.6
3,555,688	-				-0.1
3,555,690	-				-0.8
3,555,788	+				-1.7
3,555,788	+				-2.3
3,555,788	+				-1.5
3,555,788	+				-3.1
3,555,789	-				+1.2
3,555,789	-				+0.5
3,555,789	-				+1.6
3,555,789	-				+0.6
3,555,789	-				+1.2
3,555,789	-				+0.6