Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3243

Experiment: Def Carbenicillin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Def Carbenicillin 0.008 mg/ml
3,412,874	+		Psest_3241	0.71	+1.9
3,412,875	-		Psest_3241	0.71	+0.3
3,413,110	+				-1.2
3,413,110	+				-0.1
3,413,110	+				-0.7
3,413,111	-				+0.8
3,413,243	-				+0.5
3,413,243	-				-0.6
3,413,448	-				-0.3
3,413,448	-				-0.7
3,413,597	+				-2.5
3,413,608	+				-0.8
3,413,630	+				-1.8
3,413,631	-				-0.4
3,413,645	+				-2.1
3,413,645	+				-0.7
3,413,645	+				-1.8
3,413,645	+				-0.4
3,413,645	+				-2.4
3,413,645	+				-0.2
3,413,645	+				-0.2
3,413,645	+				+1.0
3,413,645	+				+0.7
3,413,645	+				+0.5
3,413,645	+				-0.9
3,413,645	+				+1.3
3,413,645	+				-0.7
3,413,645	+				+0.4
3,413,646	-				-0.7
3,413,646	-				-0.4
3,413,646	-				-0.7
3,413,646	-				-0.5
3,413,646	-				-2.1
3,413,646	-				-3.2
3,413,646	-				-0.9
3,413,646	-				-1.4
3,413,646	-				-1.8
3,413,646	-				+0.2
3,413,657	-				-0.4
3,413,703	-		Psest_3242	0.46	+0.3
3,413,730	+		Psest_3242	0.68	+1.2
3,413,730	+		Psest_3242	0.68	+0.4
3,413,730	+		Psest_3242	0.68	-1.2
3,413,730	+		Psest_3242	0.68	-1.6
3,413,731	-		Psest_3242	0.69	-0.8
3,413,731	-		Psest_3242	0.69	-0.2
3,413,731	-		Psest_3242	0.69	-0.3
3,413,731	-		Psest_3242	0.69	-0.1
3,413,731	-		Psest_3242	0.69	-2.7
3,413,731	-		Psest_3242	0.69	-1.2
3,413,836	-				-0.2
3,413,898	+				+1.5
3,413,898	+				+0.6
3,413,899	-				-1.0
3,413,899	-				-0.0
3,413,959	-		Psest_3243	0.20	-1.2
3,414,097	+		Psest_3243	0.44	-1.6
3,414,097	+		Psest_3243	0.44	-1.1
3,414,097	+		Psest_3243	0.44	-2.5
3,414,097	+		Psest_3243	0.44	-1.9
3,414,097	+		Psest_3243	0.44	-2.5
3,414,097	+		Psest_3243	0.44	-0.7
3,414,097	+		Psest_3243	0.44	-2.0
3,414,098	-		Psest_3243	0.44	-0.8
3,414,098	-		Psest_3243	0.44	-1.6
3,414,098	-		Psest_3243	0.44	-0.8
3,414,262	-		Psest_3243	0.72	-0.5
3,414,262	-		Psest_3243	0.72	-1.4
3,414,264	-		Psest_3243	0.72	-3.4
3,414,324	-		Psest_3243	0.82	-2.3
3,414,324	-		Psest_3243	0.82	-0.3
3,414,324	-		Psest_3243	0.82	-0.6
3,414,324	-		Psest_3243	0.82	-1.7
3,414,427	-				-0.2
3,414,474	+				-0.0
3,414,518	-				+1.0
3,414,645	-				+0.2
3,414,645	-				+0.8
3,414,659	+				+0.1
3,414,671	+				-1.5
3,414,779	+				+1.2
3,414,779	+				+0.9
3,414,780	-				-0.9
3,414,781	+				-0.5
3,414,781	+				-1.2
3,414,781	+				-2.0
3,414,781	+				+0.8
3,414,781	+				-0.9
3,414,781	+				-0.2
3,414,781	+				-1.2
3,414,781	+				-1.7
3,414,781	+				+0.3
3,414,782	-				-0.4
3,414,782	-				-2.2
3,414,782	-				-0.6
3,414,782	-				-1.8
3,414,782	-				-2.0
3,414,782	-				-1.1
3,414,782	-				-1.6
3,414,782	-				+0.2
3,414,782	-				-2.0
3,414,782	-				-2.2
3,414,782	-				-0.9
3,414,937	-		Psest_3244	0.21	+2.3
3,415,014	+		Psest_3244	0.37	-1.7
3,415,015	-		Psest_3244	0.37	-1.0
3,415,015	-		Psest_3244	0.37	-0.6
3,415,033	+		Psest_3244	0.41	+0.2
3,415,033	+		Psest_3244	0.41	-1.1
3,415,132	+		Psest_3244	0.62	-1.4
3,415,269	+				-1.0
3,415,269	+				+0.5
3,415,269	+				-0.0
3,415,270	-				-0.9
3,415,270	-				-1.1
3,415,270	-				-1.2
3,415,272	-				-1.6
3,415,377	+				-0.9