Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3071

Experiment: Def Carbenicillin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Def Carbenicillin 0.008 mg/ml
3,246,561	+		Psest_3070	0.32	-0.3
3,246,931	+		Psest_3070	0.63	-0.9
3,246,932	-		Psest_3070	0.63	-2.3
3,247,006	-		Psest_3070	0.69	+0.3
3,247,363	+				-1.2
3,247,363	+				-0.4
3,247,364	-				+0.5
3,247,364	-				+1.4
3,247,364	-				+2.1
3,247,367	+				-0.7
3,247,367	+				-1.4
3,247,367	+				+0.2
3,247,368	-				-1.0
3,247,368	-				+0.5
3,247,368	-				+0.4
3,247,368	-				+0.4
3,247,368	-				-0.1
3,247,368	-				+0.5
3,247,368	-				-0.7
3,247,841	+		Psest_3071	0.58	-1.4
3,247,841	+		Psest_3071	0.58	+0.6
3,247,842	-		Psest_3071	0.58	+0.7
3,247,842	-		Psest_3071	0.58	-0.1
3,247,842	-		Psest_3071	0.58	-0.4
3,247,842	-		Psest_3071	0.58	-0.1
3,248,012	+		Psest_3071	0.79	-0.9
3,248,012	+		Psest_3071	0.79	-0.7
3,248,013	-		Psest_3071	0.80	+0.0
3,248,013	-		Psest_3071	0.80	-0.3
3,248,150	+				+0.6
3,248,150	+				-1.9
3,248,151	-				-1.6
3,248,151	-				-0.4
3,248,151	-				-0.2
3,248,242	+				-2.0
3,248,242	+				-0.8
3,248,242	+				-0.6
3,248,242	+				-0.2
3,248,242	+				+0.0
3,248,242	+				-0.9
3,248,242	+				-0.5
3,248,242	+				+1.1
3,248,242	+				+0.3
3,248,242	+				-0.8
3,248,242	+				-0.4
3,248,242	+				+0.5
3,248,242	+				-1.6
3,248,242	+				-0.4
3,248,242	+				-0.9
3,248,242	+				+0.6
3,248,242	+				-0.5
3,248,242	+				-0.5
3,248,242	+				-0.1
3,248,242	+				+1.2
3,248,242	+				+0.5
3,248,243	-				-0.7
3,248,243	-				+0.3
3,248,243	-				-1.5
3,248,243	-				-1.8
3,248,243	-				-0.9
3,248,243	-				-0.2
3,248,243	-				-0.4
3,248,243	-				-0.4
3,248,243	-				-0.5
3,248,243	-				-1.6
3,248,243	-				-0.0
3,248,243	-				+0.1
3,248,243	-				-0.2
3,248,243	-				-0.6
3,248,243	-				-0.9
3,248,243	-				-1.0
3,248,243	-				-0.1
3,248,243	-				-0.4
3,248,243	-				-0.7
3,248,243	-				-1.1
3,248,243	-				-1.2
3,248,243	-				-1.1
3,248,246	+				-1.2
3,248,247	-				+0.0
3,248,324	-		Psest_3072	0.17	-0.9
3,248,327	-		Psest_3072	0.18	-0.6
3,248,327	-		Psest_3072	0.18	-1.5
3,248,338	+		Psest_3072	0.19	+0.8
3,248,339	-		Psest_3072	0.19	-1.0
3,248,701	+		Psest_3072	0.61	-0.2
3,248,701	+		Psest_3072	0.61	-0.1
3,248,701	+		Psest_3072	0.61	-1.6
3,248,853	-		Psest_3072	0.79	+0.1
3,248,863	+		Psest_3072	0.80	-0.5
3,248,864	-		Psest_3072	0.80	-0.4
3,248,954	+				-1.1
3,249,059	-				+0.5
3,249,166	+				-0.6
3,249,174	+				+0.6
3,249,174	+				-0.6
3,249,175	-				-0.8