Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3016

Experiment: Def Carbenicillin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Def Carbenicillin 0.008 mg/ml
3,202,660	+		Psest_3014	0.56	+0.2
3,203,001	+		Psest_3015	0.13	-1.5
3,203,002	-		Psest_3015	0.13	-0.1
3,203,034	+		Psest_3015	0.19	-0.8
3,203,034	+		Psest_3015	0.19	-1.1
3,203,034	+		Psest_3015	0.19	-3.6
3,203,035	-		Psest_3015	0.19	+0.9
3,203,035	-		Psest_3015	0.19	+0.0
3,203,035	-		Psest_3015	0.19	+0.4
3,203,035	-		Psest_3015	0.19	+0.1
3,203,038	+		Psest_3015	0.19	-2.4
3,203,038	+		Psest_3015	0.19	-1.2
3,203,039	-		Psest_3015	0.19	-0.3
3,203,095	-		Psest_3015	0.29	-1.0
3,203,121	+		Psest_3015	0.34	-1.7
3,203,171	-		Psest_3015	0.43	-1.6
3,203,199	+		Psest_3015	0.48	+0.3
3,203,199	+		Psest_3015	0.48	-0.3
3,203,199	+		Psest_3015	0.48	-1.3
3,203,199	+		Psest_3015	0.48	-0.9
3,203,199	+		Psest_3015	0.48	-0.1
3,203,229	+		Psest_3015	0.53	+0.1
3,203,475	+				+0.9
3,203,545	+				-0.2
3,203,545	+				-0.8
3,203,545	+				+0.9
3,203,546	-				+1.9
3,203,557	+				+0.7
3,203,572	+				+2.2
3,203,572	+				+1.2
3,203,596	+				+0.9
3,203,614	+				+0.6
3,203,887	+		Psest_3016	0.19	-1.9
3,203,887	+		Psest_3016	0.19	-1.9
3,203,888	-		Psest_3016	0.19	+0.8
3,203,888	-		Psest_3016	0.19	+1.0
3,203,992	+		Psest_3016	0.24	-0.5
3,204,127	+		Psest_3016	0.31	-1.1
3,204,127	+		Psest_3016	0.31	-0.2
3,204,128	-		Psest_3016	0.31	-1.1
3,204,128	-		Psest_3016	0.31	+0.5
3,204,166	+		Psest_3016	0.34	-0.3
3,204,167	-		Psest_3016	0.34	+1.8
3,204,301	+		Psest_3016	0.41	-1.6
3,204,301	+		Psest_3016	0.41	+1.0
3,204,302	-		Psest_3016	0.41	-0.6
3,204,314	-		Psest_3016	0.42	-0.6
3,204,343	+		Psest_3016	0.43	-2.6
3,204,343	+		Psest_3016	0.43	-1.4
3,204,343	+		Psest_3016	0.43	-0.9
3,204,343	+		Psest_3016	0.43	-0.7
3,204,344	-		Psest_3016	0.43	+0.1
3,204,344	-		Psest_3016	0.43	-0.8
3,204,344	-		Psest_3016	0.43	+0.3
3,204,344	-		Psest_3016	0.43	-0.4
3,204,344	-		Psest_3016	0.43	-1.4
3,204,344	-		Psest_3016	0.43	-0.3
3,204,398	+		Psest_3016	0.46	-1.3
3,204,398	+		Psest_3016	0.46	-0.6
3,204,399	-		Psest_3016	0.46	-2.8
3,204,399	-		Psest_3016	0.46	-0.1
3,204,399	-		Psest_3016	0.46	+0.2
3,204,466	+		Psest_3016	0.50	-0.4
3,204,466	+		Psest_3016	0.50	+0.2
3,204,466	+		Psest_3016	0.50	+0.1
3,204,466	+		Psest_3016	0.50	-1.0
3,204,466	+		Psest_3016	0.50	+0.0
3,204,467	-		Psest_3016	0.50	+0.5
3,204,467	-		Psest_3016	0.50	-0.0
3,204,467	-		Psest_3016	0.50	-1.9
3,204,484	+		Psest_3016	0.51	-0.2
3,204,485	-		Psest_3016	0.51	+1.2
3,204,624	+		Psest_3016	0.58	-0.4
3,204,625	-		Psest_3016	0.58	-0.9
3,204,625	-		Psest_3016	0.58	+1.1
3,204,635	-		Psest_3016	0.59	-0.0
3,204,635	-		Psest_3016	0.59	-0.3
3,204,817	+		Psest_3016	0.69	+0.2
3,204,818	-		Psest_3016	0.69	+0.2
3,204,862	+		Psest_3016	0.71	-1.5
3,204,862	+		Psest_3016	0.71	-0.3
3,204,862	+		Psest_3016	0.71	+0.0
3,204,862	+		Psest_3016	0.71	-0.0
3,204,863	-		Psest_3016	0.71	+0.3
3,204,863	-		Psest_3016	0.71	+0.9
3,204,863	-		Psest_3016	0.71	+0.1
3,204,863	-		Psest_3016	0.71	-1.9
3,204,967	+		Psest_3016	0.77	-0.8
3,205,230	+				-1.8
3,205,363	+				+1.3
3,205,363	+				+1.1
3,205,363	+				-1.3
3,205,363	+				-0.5
3,205,364	-				+0.3
3,205,364	-				-2.4
3,205,400	+				-1.9
3,205,400	+				+1.8
3,205,400	+				-0.9
3,205,400	+				+0.8
3,205,400	+				-1.4
3,205,400	+				-1.0
3,205,400	+				+0.5
3,205,401	-				-0.5
3,205,401	-				-1.2
3,205,401	-				-0.9
3,205,489	-				-0.3
3,205,489	-				-1.0
3,205,557	+				+0.1
3,205,557	+				+1.3
3,205,611	-				-0.7
3,205,614	-				-0.3
3,205,956	+				+0.6
3,205,956	+				+0.0
3,205,957	-				-0.4
3,205,957	-				-0.9
3,205,957	-				-1.9
3,206,114	+		Psest_3017	0.29	-1.5
3,206,114	+		Psest_3017	0.29	-1.3
3,206,115	-		Psest_3017	0.30	+0.8
3,206,115	-		Psest_3017	0.30	-0.2
3,206,115	-		Psest_3017	0.30	-1.3
3,206,115	-		Psest_3017	0.30	+0.2
3,206,115	-		Psest_3017	0.30	-1.4
3,206,154	-		Psest_3017	0.34	+0.2
3,206,225	-		Psest_3017	0.43	-0.6
3,206,225	-		Psest_3017	0.43	-1.9