Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2578

Experiment: Def Carbenicillin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Def Carbenicillin 0.008 mg/ml
2,756,969	+		Psest_2577	0.53	+1.2
2,756,970	-		Psest_2577	0.53	-1.0
2,757,067	-		Psest_2577	0.58	-0.3
2,757,334	+		Psest_2577	0.72	+0.3
2,757,335	-		Psest_2577	0.72	-1.0
2,757,335	-		Psest_2577	0.72	-0.5
2,757,420	+		Psest_2577	0.76	-0.8
2,757,420	+		Psest_2577	0.76	+0.4
2,757,420	+		Psest_2577	0.76	+1.3
2,757,420	+		Psest_2577	0.76	-1.9
2,757,420	+		Psest_2577	0.76	-1.0
2,757,420	+		Psest_2577	0.76	-0.6
2,757,421	+		Psest_2577	0.76	-2.6
2,757,421	-		Psest_2577	0.76	-0.9
2,757,421	-		Psest_2577	0.76	+0.3
2,757,544	-		Psest_2577	0.82	+0.1
2,757,763	+				+1.4
2,757,763	+				+0.1
2,757,763	+				+0.5
2,757,764	-				+0.7
2,757,773	+				+0.4
2,757,774	-				-1.2
2,757,774	-				-0.4
2,757,872	+				+0.7
2,757,872	+				+1.5
2,757,873	-				+0.0
2,757,873	-				+0.1
2,758,094	-		Psest_2578	0.12	-3.8
2,758,266	+		Psest_2578	0.27	-3.8
2,758,267	-		Psest_2578	0.27	-2.5
2,758,267	-		Psest_2578	0.27	-2.5
2,758,269	+		Psest_2578	0.27	-3.9
2,758,343	-		Psest_2578	0.33	-2.0
2,758,497	+		Psest_2578	0.46	-1.9
2,758,497	+		Psest_2578	0.46	-2.7
2,758,497	+		Psest_2578	0.46	-3.4
2,758,498	-		Psest_2578	0.46	-2.4
2,758,498	-		Psest_2578	0.46	-2.0
2,758,498	-		Psest_2578	0.46	-1.0
2,758,498	-		Psest_2578	0.46	+1.0
2,758,574	-		Psest_2578	0.52	-1.0
2,758,681	+		Psest_2578	0.61	+0.0
2,758,682	-		Psest_2578	0.61	-2.0
2,758,682	-		Psest_2578	0.61	-2.1
2,758,762	-		Psest_2578	0.67	-2.7
2,758,762	-		Psest_2578	0.67	-1.8
2,758,762	-		Psest_2578	0.67	-1.0
2,758,812	-		Psest_2578	0.72	-0.4
2,758,911	-		Psest_2578	0.80	-2.1
2,758,911	-		Psest_2578	0.80	-1.4
2,758,912	+		Psest_2578	0.80	-2.2
2,758,912	+		Psest_2578	0.80	-1.6
2,758,913	-		Psest_2578	0.80	-2.6
2,758,913	-		Psest_2578	0.80	-2.9
2,758,913	-		Psest_2578	0.80	-2.6
2,758,913	-		Psest_2578	0.80	-2.0
2,758,931	+		Psest_2578	0.81	-1.5
2,758,931	+		Psest_2578	0.81	-3.3
2,758,931	+		Psest_2578	0.81	-2.0
2,758,931	+		Psest_2578	0.81	-2.7
2,758,932	-		Psest_2578	0.82	-2.4
2,758,932	-		Psest_2578	0.82	+2.5
2,759,019	+		Psest_2578	0.89	-2.7
2,759,019	+		Psest_2578	0.89	-1.3
2,759,019	+		Psest_2578	0.89	-1.3
2,759,019	+		Psest_2578	0.89	-3.4
2,759,019	+		Psest_2578	0.89	-4.7
2,759,019	+		Psest_2578	0.89	-3.8
2,759,019	+		Psest_2578	0.89	-2.0
2,759,019	+		Psest_2578	0.89	-2.4
2,759,019	+		Psest_2578	0.89	-3.7
2,759,020	-		Psest_2578	0.89	-1.8
2,759,020	-		Psest_2578	0.89	-2.5
2,759,020	-		Psest_2578	0.89	-1.8
2,759,020	-		Psest_2578	0.89	-1.5
2,759,020	-		Psest_2578	0.89	-3.1
2,759,020	-		Psest_2578	0.89	-4.2
2,759,084	+				-1.4
2,759,085	-				-0.5
2,759,156	-				+1.2
2,759,156	-				+0.8
2,759,156	-				-0.3
2,759,156	-				-1.5
2,759,156	-				-0.4
2,759,156	-				+1.5
2,759,156	-				+1.5
2,759,156	-				+0.7
2,759,159	+				-0.3
2,759,159	+				-2.4
2,759,160	-				-0.2
2,759,160	-				-1.0
2,759,160	-				+0.4
2,759,160	-				-1.0
2,759,160	-				+0.7
2,759,162	+				-1.9
2,759,163	-				+0.4
2,759,163	-				-1.2
2,759,213	+				-3.8
2,759,214	-				+0.7
2,759,214	-				-0.0
2,759,214	-				+0.7
2,759,291	+				+0.2
2,759,291	+				-2.0
2,759,292	-				-1.7
2,759,318	+				-1.5
2,759,318	+				-1.2
2,759,318	+				-1.9
2,759,318	+				+0.0
2,759,318	+				+0.9
2,759,319	-				-1.2
2,759,319	-				-0.2
2,759,319	-				-0.9
2,759,516	-		Psest_2579	0.21	+0.6
2,759,540	+		Psest_2579	0.22	-0.7
2,759,541	-		Psest_2579	0.22	+0.0
2,759,541	-		Psest_2579	0.22	-0.6
2,759,724	+		Psest_2579	0.35	-0.7
2,759,726	+		Psest_2579	0.35	-1.2
2,759,727	-		Psest_2579	0.35	-1.7
2,759,829	+		Psest_2579	0.42	-0.4
2,759,898	-		Psest_2579	0.46	-0.5
2,759,898	-		Psest_2579	0.46	-1.1
2,759,939	+		Psest_2579	0.49	+0.0
2,759,940	-		Psest_2579	0.49	-0.2
2,759,945	+		Psest_2579	0.49	+0.1
2,760,020	+		Psest_2579	0.54	+0.9
2,760,020	+		Psest_2579	0.54	-1.0
2,760,020	+		Psest_2579	0.54	-0.6
2,760,020	+		Psest_2579	0.54	-1.0
2,760,020	+		Psest_2579	0.54	+0.3
2,760,020	+		Psest_2579	0.54	-0.1
2,760,021	-		Psest_2579	0.54	-0.5
2,760,021	-		Psest_2579	0.54	+0.2
2,760,021	-		Psest_2579	0.54	-0.2
2,760,021	-		Psest_2579	0.54	+0.6
2,760,021	-		Psest_2579	0.54	-0.6
2,760,101	+		Psest_2579	0.60	-0.4
2,760,101	+		Psest_2579	0.60	-1.3
2,760,101	+		Psest_2579	0.60	-1.6
2,760,101	+		Psest_2579	0.60	-0.9
2,760,102	-		Psest_2579	0.60	-0.7
2,760,102	-		Psest_2579	0.60	-0.5
2,760,102	-		Psest_2579	0.60	-0.3