Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2279

Experiment: Def Carbenicillin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Def Carbenicillin 0.008 mg/ml
2,426,567	-		Psest_2276	0.89	-0.6
2,426,635	-				-2.5
2,426,673	+				-0.6
2,426,673	+				-1.4
2,426,673	+				-1.0
2,426,673	+				-0.0
2,426,673	+				-0.0
2,426,730	+				-1.3
2,426,730	+				-0.2
2,426,730	+				-0.8
2,426,731	-				-1.1
2,426,804	+				-1.1
2,426,805	-				-1.3
2,426,805	-				-0.4
2,426,805	-				+0.2
2,426,805	-				-0.2
2,426,863	+				+0.3
2,426,864	-				-0.9
2,426,866	+				-0.3
2,426,866	+				+0.7
2,426,867	-				+0.8
2,426,867	-				-0.7
2,426,867	-				-1.6
2,426,950	+				+0.5
2,427,142	+		Psest_2277	0.10	+0.1
2,427,205	+		Psest_2277	0.80	+0.7
2,427,206	-		Psest_2277	0.81	-1.7
2,427,211	+		Psest_2277	0.87	-0.0
2,427,212	-		Psest_2277	0.88	+0.3
2,427,212	-		Psest_2277	0.88	+0.4
2,427,215	+				+0.5
2,427,479	+		Psest_2278	0.67	+0.5
2,427,479	+		Psest_2278	0.67	-1.7
2,427,480	-		Psest_2278	0.68	+0.6
2,427,483	+		Psest_2278	0.69	-1.0
2,427,484	-		Psest_2278	0.69	-0.3
2,427,484	-		Psest_2278	0.69	+0.0
2,427,484	-		Psest_2278	0.69	-0.3
2,427,566	+				+1.3
2,427,566	+				-1.0
2,427,616	+				+0.5
2,427,617	-				+1.4
2,427,617	-				-2.6
2,427,710	+		Psest_2279	0.14	+1.1
2,427,710	+		Psest_2279	0.14	+0.2
2,427,710	+		Psest_2279	0.14	-0.7
2,427,710	+		Psest_2279	0.14	-1.2
2,427,711	-		Psest_2279	0.15	-2.1
2,427,711	-		Psest_2279	0.15	+1.4
2,427,820	+		Psest_2279	0.24	-0.2
2,427,821	-		Psest_2279	0.24	-0.4
2,427,823	+		Psest_2279	0.24	-0.4
2,427,823	+		Psest_2279	0.24	-1.2
2,427,823	+		Psest_2279	0.24	-0.7
2,427,823	+		Psest_2279	0.24	-0.4
2,427,824	-		Psest_2279	0.24	-0.0
2,427,824	-		Psest_2279	0.24	-0.2
2,427,824	-		Psest_2279	0.24	+0.9
2,427,824	-		Psest_2279	0.24	+0.6
2,427,824	-		Psest_2279	0.24	-1.7
2,428,100	-		Psest_2279	0.49	-2.0
2,428,123	+		Psest_2279	0.51	-1.1
2,428,123	+		Psest_2279	0.51	-1.4
2,428,123	+		Psest_2279	0.51	-0.9
2,428,124	-		Psest_2279	0.51	-0.9
2,428,126	+		Psest_2279	0.51	+0.1
2,428,126	+		Psest_2279	0.51	-0.9
2,428,126	+		Psest_2279	0.51	-0.2
2,428,126	+		Psest_2279	0.51	+0.5
2,428,126	+		Psest_2279	0.51	-1.9
2,428,127	-		Psest_2279	0.51	+0.3
2,428,127	-		Psest_2279	0.51	-0.5
2,428,127	-		Psest_2279	0.51	-1.0
2,428,199	+		Psest_2279	0.57	+0.0
2,428,199	+		Psest_2279	0.57	+0.2
2,428,199	+		Psest_2279	0.57	-0.5
2,428,200	-		Psest_2279	0.57	+0.2
2,428,200	-		Psest_2279	0.57	+1.7
2,428,200	-		Psest_2279	0.57	+0.4
2,428,200	-		Psest_2279	0.57	-0.3
2,428,200	-		Psest_2279	0.57	-0.4
2,428,200	-		Psest_2279	0.57	-0.6
2,428,200	-		Psest_2279	0.57	-0.4
2,428,203	+		Psest_2279	0.58	-0.7
2,428,203	+		Psest_2279	0.58	-2.4
2,428,204	-		Psest_2279	0.58	+0.1
2,428,204	-		Psest_2279	0.58	+1.0
2,428,239	-		Psest_2279	0.61	-0.8
2,428,239	-		Psest_2279	0.61	+0.7
2,428,239	-		Psest_2279	0.61	-0.9
2,428,258	+		Psest_2279	0.62	-0.6
2,428,258	+		Psest_2279	0.62	-0.0
2,428,259	-		Psest_2279	0.62	+0.3
2,428,261	+		Psest_2279	0.63	+0.7
2,428,261	+		Psest_2279	0.63	-1.4
2,428,262	-		Psest_2279	0.63	+0.0
2,428,262	-		Psest_2279	0.63	-0.1
2,428,262	-		Psest_2279	0.63	-1.0
2,428,620	+				+1.6
2,428,621	-				+0.5
2,428,747	-				+1.5
2,428,846	+		Psest_2280	0.14	+0.0
2,428,846	+		Psest_2280	0.14	-1.3
2,428,846	+		Psest_2280	0.14	-1.3
2,428,846	+		Psest_2280	0.14	+0.5
2,428,847	-		Psest_2280	0.14	-0.5
2,428,847	-		Psest_2280	0.14	-1.4
2,428,847	-		Psest_2280	0.14	+0.6
2,429,040	+		Psest_2280	0.53	+0.1
2,429,040	+		Psest_2280	0.53	-1.4
2,429,041	-		Psest_2280	0.53	+0.1
2,429,041	-		Psest_2280	0.53	+0.2
2,429,189	-		Psest_2280	0.82	-1.0
2,429,292	+				-0.4
2,429,292	+				-2.1
2,429,293	-				+0.0
2,429,293	-				+0.1
2,429,458	+		Psest_2281	0.18	-3.6
2,429,478	+		Psest_2281	0.20	-2.2
2,429,479	-		Psest_2281	0.20	-0.1
2,429,479	-		Psest_2281	0.20	+0.5