Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1912

Experiment: Def Carbenicillin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Def Carbenicillin 0.008 mg/ml
2,019,348	+		Psest_1911	0.60	+0.1
2,019,480	+		Psest_1911	0.75	+0.1
2,019,481	-		Psest_1911	0.75	-0.6
2,019,481	-		Psest_1911	0.75	-0.7
2,019,481	-		Psest_1911	0.75	-0.3
2,019,497	+		Psest_1911	0.77	+0.9
2,019,497	+		Psest_1911	0.77	+1.8
2,019,497	+		Psest_1911	0.77	+1.0
2,019,498	-		Psest_1911	0.77	-1.5
2,019,498	-		Psest_1911	0.77	-1.3
2,019,498	-		Psest_1911	0.77	+0.3
2,019,501	+		Psest_1911	0.77	+1.7
2,019,501	+		Psest_1911	0.77	+1.2
2,019,501	+		Psest_1911	0.77	+0.7
2,019,501	+		Psest_1911	0.77	+1.1
2,019,501	+		Psest_1911	0.77	+1.9
2,019,501	+		Psest_1911	0.77	+1.6
2,019,502	-		Psest_1911	0.77	-0.0
2,019,502	-		Psest_1911	0.77	-0.7
2,019,502	-		Psest_1911	0.77	+0.4
2,019,612	+				+2.9
2,019,613	-				+0.9
2,019,615	+				+3.3
2,019,615	+				+2.9
2,019,615	+				-0.6
2,019,615	+				+2.2
2,019,616	-				-0.3
2,019,616	-				+1.3
2,019,658	-				+0.4
2,019,658	-				-1.4
2,019,658	-				-1.1
2,019,658	-				-0.5
2,019,658	-				+1.2
2,019,883	+				+2.3
2,019,884	-				+2.0
2,019,884	-				+1.8
2,019,884	-				+2.0
2,019,924	+				+1.3
2,020,005	-				+2.1
2,020,005	-				+0.5
2,020,005	-				+0.4
2,020,119	+		Psest_1912	0.28	+0.7
2,020,120	-		Psest_1912	0.28	+0.5
2,020,187	+		Psest_1912	0.48	+1.5
2,020,231	+		Psest_1912	0.61	+4.7
2,020,245	+		Psest_1912	0.65	+0.1
2,020,245	+		Psest_1912	0.65	+0.8
2,020,245	+		Psest_1912	0.65	+1.0
2,020,245	+		Psest_1912	0.65	+0.7
2,020,246	-		Psest_1912	0.65	-1.4
2,020,246	-		Psest_1912	0.65	+0.2
2,020,246	-		Psest_1912	0.65	-1.1
2,020,246	-		Psest_1912	0.65	-0.0
2,020,246	-		Psest_1912	0.65	+1.7
2,020,246	-		Psest_1912	0.65	-1.6
2,020,246	-		Psest_1912	0.65	+0.3
2,020,496	-		Psest_1913	0.13	+1.5
2,020,798	+		Psest_1913	0.45	+0.3
2,020,893	+		Psest_1913	0.55	+0.9
2,020,893	+		Psest_1913	0.55	-0.3
2,020,893	+		Psest_1913	0.55	+0.8
2,020,894	-		Psest_1913	0.55	+1.1
2,021,210	+		Psest_1913	0.88	+2.2
2,021,280	+				-1.7
2,021,280	+				+1.0
2,021,280	+				-1.0