Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1859

Experiment: Def Carbenicillin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Def Carbenicillin 0.008 mg/ml
1,962,564	+		Psest_1857	0.63	-1.5
1,962,564	+		Psest_1857	0.63	-0.2
1,962,565	-		Psest_1857	0.63	-2.6
1,962,565	-		Psest_1857	0.63	-1.4
1,962,644	+		Psest_1857	0.67	-0.3
1,962,644	+		Psest_1857	0.67	+1.6
1,962,718	+		Psest_1857	0.71	-0.2
1,962,718	+		Psest_1857	0.71	+0.5
1,962,719	-		Psest_1857	0.72	-1.1
1,962,768	+		Psest_1857	0.74	-0.4
1,962,816	+		Psest_1857	0.77	-1.1
1,962,817	-		Psest_1857	0.77	-2.0
1,962,852	-		Psest_1857	0.79	-0.8
1,962,915	+		Psest_1857	0.83	+0.6
1,962,915	+		Psest_1857	0.83	-0.8
1,962,915	+		Psest_1857	0.83	+0.8
1,962,936	+		Psest_1857	0.84	-0.1
1,962,936	+		Psest_1857	0.84	-0.9
1,962,936	+		Psest_1857	0.84	+2.8
1,962,936	+		Psest_1857	0.84	+0.6
1,962,937	-		Psest_1857	0.84	-0.7
1,963,087	+				+0.4
1,963,113	+				+1.5
1,963,113	+				+1.4
1,963,114	-				+1.5
1,963,114	-				+0.6
1,963,203	-				-0.8
1,963,284	+				+0.9
1,963,284	+				+1.5
1,963,285	-				-0.6
1,963,285	-				+0.1
1,963,285	-				-0.3
1,963,309	-				+0.1
1,963,362	+				-0.5
1,963,362	+				-1.3
1,963,363	-				-1.5
1,963,363	-				-1.9
1,963,363	-				-1.4
1,963,395	+				-0.0
1,963,396	-				-0.2
1,963,403	+				+1.3
1,963,608	+				-0.1
1,963,610	+				+0.1
1,963,610	+				-0.9
1,963,611	-				-0.3
1,963,627	+				-1.3
1,963,627	+				-0.1
1,963,628	-				+0.8
1,963,628	-				-1.0
1,963,628	-				-0.4
1,963,629	+				-1.7
1,963,714	+		Psest_1859	0.22	+2.9
1,963,714	+		Psest_1859	0.22	-0.9
1,963,714	+		Psest_1859	0.22	-0.6
1,963,714	+		Psest_1859	0.22	-1.0
1,963,715	-		Psest_1859	0.22	-0.2
1,963,715	-		Psest_1859	0.22	-0.7
1,963,734	+		Psest_1859	0.25	-0.3
1,963,734	+		Psest_1859	0.25	-0.7
1,963,778	+		Psest_1859	0.32	-0.9
1,963,779	-		Psest_1859	0.32	-2.1
1,963,779	-		Psest_1859	0.32	-0.5
1,963,779	-		Psest_1859	0.32	-0.2
1,963,795	+		Psest_1859	0.34	+0.8
1,963,795	+		Psest_1859	0.34	-0.5
1,963,937	+		Psest_1859	0.56	-0.3
1,964,159	+		Psest_1859	0.89	-2.7
1,964,159	+		Psest_1859	0.89	+0.5
1,964,160	-		Psest_1859	0.89	+1.8
1,964,160	-		Psest_1859	0.89	-0.0
1,964,160	-		Psest_1859	0.89	-1.0
1,964,250	-				-0.8
1,964,268	+				+0.6
1,964,545	+		Psest_1860	0.38	-0.5
1,964,545	+		Psest_1860	0.38	+2.0
1,964,546	-		Psest_1860	0.38	-1.6
1,964,664	+		Psest_1860	0.58	+1.8
1,964,881	+				-0.1
1,964,946	+				+0.2
1,964,947	-				+0.8
1,964,997	+				-0.8
1,964,997	+				-0.4
1,964,997	+				-2.4
1,964,997	+				+0.3
1,964,998	-				-0.9
1,964,998	-				+1.1
1,964,998	-				+0.2
1,964,998	-				-0.6
1,965,118	-		Psest_1861	0.13	-0.1
1,965,124	+		Psest_1861	0.13	+0.8
1,965,124	+		Psest_1861	0.13	+0.9
1,965,124	+		Psest_1861	0.13	+1.3
1,965,125	-		Psest_1861	0.13	+0.2
1,965,198	+		Psest_1861	0.19	+0.7
1,965,198	+		Psest_1861	0.19	-0.9
1,965,198	+		Psest_1861	0.19	+0.1
1,965,199	-		Psest_1861	0.19	-1.8