Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1613

Experiment: Def Carbenicillin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Def Carbenicillin 0.008 mg/ml
1,716,133	-				+2.6
1,716,133	-				+1.6
1,716,133	-				+2.6
1,716,133	-				+2.5
1,716,133	-				-0.4
1,716,223	+				-1.3
1,716,223	+				-0.8
1,716,223	+				-0.9
1,716,224	-				+1.4
1,716,224	-				+2.3
1,716,571	+		Psest_1612	0.39	-1.8
1,716,572	-		Psest_1612	0.39	+2.2
1,716,882	+		Psest_1612	0.72	-3.1
1,716,883	-		Psest_1612	0.73	-2.3
1,716,883	-		Psest_1612	0.73	-0.7
1,717,175	+				-1.5
1,717,175	+				-0.1
1,717,175	+				-0.2
1,717,176	-				-1.6
1,717,176	-				-0.9
1,717,196	+				+0.0
1,717,197	-				-1.6
1,717,197	-				+0.5
1,717,197	-				-2.6
1,717,197	-				+0.0
1,717,197	-				-0.5
1,717,200	+				-1.3
1,717,200	+				+0.0
1,717,200	+				-1.5
1,717,200	+				+0.0
1,717,200	+				-0.7
1,717,200	+				-1.3
1,717,200	+				-0.5
1,717,200	+				-2.9
1,717,200	+				-0.3
1,717,201	-				-2.3
1,717,201	-				-0.5
1,717,201	-				-0.3
1,717,201	-				-0.7
1,717,201	-				-0.2
1,717,201	-				-2.0
1,717,201	-				-0.4
1,717,201	-				-1.5
1,717,201	-				-1.0
1,717,201	-				-1.0
1,717,201	-				+0.2
1,717,244	+		Psest_1613	0.15	-2.8
1,717,244	+		Psest_1613	0.15	-2.2
1,717,244	+		Psest_1613	0.15	-0.8
1,717,244	+		Psest_1613	0.15	-0.3
1,717,244	+		Psest_1613	0.15	-0.9
1,717,245	-		Psest_1613	0.15	-1.9
1,717,245	-		Psest_1613	0.15	-0.6
1,717,259	+		Psest_1613	0.17	-2.4
1,717,304	-		Psest_1613	0.23	-0.6
1,717,304	-		Psest_1613	0.23	-2.1
1,717,313	+		Psest_1613	0.25	+0.1
1,717,499	+		Psest_1613	0.50	-0.5
1,717,500	-		Psest_1613	0.50	-2.6
1,717,793	+				+0.5
1,717,794	-				-0.5
1,717,794	-				-1.4
1,717,874	+				-0.4
1,717,874	+				-0.8
1,717,874	+				-3.0
1,717,875	-				-1.3
1,717,875	-				-0.9
1,717,890	+				-1.4
1,717,890	+				-1.4
1,717,999	-				-2.0
1,718,067	+		Psest_1614	0.10	-0.5
1,718,105	+		Psest_1614	0.13	-1.8
1,718,105	+		Psest_1614	0.13	-2.0
1,718,109	+		Psest_1614	0.13	-0.1
1,718,109	+		Psest_1614	0.13	-0.1
1,718,142	+		Psest_1614	0.15	-3.0
1,718,271	+		Psest_1614	0.22	-0.8
1,718,271	+		Psest_1614	0.22	+0.6
1,718,271	+		Psest_1614	0.22	-1.3
1,718,271	+		Psest_1614	0.22	-0.1
1,718,272	-		Psest_1614	0.22	-1.4
1,718,272	-		Psest_1614	0.22	-1.8
1,718,272	-		Psest_1614	0.22	-0.9
1,718,272	-		Psest_1614	0.22	-0.3
1,718,555	-		Psest_1614	0.37	-0.5
1,718,602	+		Psest_1614	0.40	-0.7
1,718,603	-		Psest_1614	0.40	+1.7
1,718,604	+		Psest_1614	0.40	+1.0
1,718,605	-		Psest_1614	0.40	-0.8
1,718,605	-		Psest_1614	0.40	-2.5
1,718,605	-		Psest_1614	0.40	-0.3
1,718,793	+		Psest_1614	0.50	-0.6