Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1458

Experiment: Def Carbenicillin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Def Carbenicillin 0.008 mg/ml
1,566,341	+				-1.9
1,566,341	+				+0.7
1,566,341	+				+0.3
1,566,341	+				-0.3
1,566,341	+				-0.6
1,566,341	+				+0.2
1,566,341	+				+0.2
1,566,342	-				-0.2
1,566,342	-				-1.6
1,566,342	-				-0.4
1,566,342	-				-1.1
1,566,498	-		Psest_1457	0.23	-1.3
1,566,722	+		Psest_1457	0.66	+0.9
1,566,723	-		Psest_1457	0.66	-1.9
1,566,922	-				-0.2
1,566,947	-				-2.3
1,566,947	-				+0.1
1,566,993	+				+1.0
1,566,994	-				-0.4
1,566,994	-				-0.5
1,566,994	-				-0.8
1,566,994	-				+1.4
1,567,015	+				+0.1
1,567,015	+				+0.1
1,567,015	+				+0.3
1,567,015	+				-2.3
1,567,015	+				-0.6
1,567,015	+				-0.4
1,567,015	+				-1.0
1,567,015	+				-0.9
1,567,015	+				+0.3
1,567,015	+				-0.9
1,567,015	+				-2.2
1,567,015	+				-2.0
1,567,015	+				-0.4
1,567,016	-				-0.4
1,567,016	-				+0.1
1,567,016	-				-0.8
1,567,016	-				-0.5
1,567,016	-				-0.9
1,567,016	-				-0.7
1,567,016	-				-0.7
1,567,016	-				+0.2
1,567,016	-				-0.7
1,567,016	-				-0.2
1,567,016	-				-0.6
1,567,016	-				-0.5
1,567,016	-				-1.0
1,567,016	-				-0.1
1,567,016	-				+0.0
1,567,016	-				+1.5
1,567,016	-				-0.4
1,567,016	-				+0.4
1,567,016	-				-1.8
1,567,258	+		Psest_1458	0.25	-2.1
1,567,258	+		Psest_1458	0.25	-1.6
1,567,259	-		Psest_1458	0.25	-2.6
1,567,259	-		Psest_1458	0.25	-1.2
1,567,259	-		Psest_1458	0.25	-1.1
1,567,259	-		Psest_1458	0.25	-1.5
1,567,259	-		Psest_1458	0.25	-1.9
1,567,259	-		Psest_1458	0.25	-1.3
1,567,295	-		Psest_1458	0.42	-0.4
1,567,420	+				-1.0
1,567,421	-				-0.1
1,567,449	+				-3.0
1,567,450	-				-0.8
1,567,494	+				-0.5
1,567,494	+				-1.1
1,567,494	+				-1.8
1,567,494	+				-1.5
1,567,494	+				-2.2
1,567,494	+				-1.3
1,567,494	+				-1.0
1,567,495	-				+0.1
1,567,495	-				+0.3
1,567,495	-				+0.5
1,567,495	-				-1.2
1,567,495	-				-1.9
1,567,495	-				-2.1
1,567,495	-				-1.2
1,567,495	-				-1.5
1,567,543	+		Psest_1459	0.18	-2.1
1,567,543	+		Psest_1459	0.18	-1.4
1,567,544	-		Psest_1459	0.18	-0.8
1,567,544	-		Psest_1459	0.18	-1.4
1,567,545	+		Psest_1459	0.18	+0.5
1,567,545	+		Psest_1459	0.18	-1.0
1,567,603	-		Psest_1459	0.29	-0.5
1,567,797	-		Psest_1459	0.66	-2.9
1,567,797	-		Psest_1459	0.66	-1.3
1,567,836	+		Psest_1459	0.73	-0.4
1,567,836	+		Psest_1459	0.73	+0.6
1,568,069	+				+0.3
1,568,070	-				-1.4
1,568,085	-				-1.5
1,568,158	+				+0.2
1,568,158	+				+0.6
1,568,158	+				-0.2
1,568,158	+				+0.1
1,568,158	+				-1.0
1,568,159	-				-0.0
1,568,159	-				-0.7
1,568,159	-				-1.2
1,568,159	-				-2.3
1,568,199	+				-0.9
1,568,199	+				-1.9
1,568,199	+				-1.2
1,568,199	+				+0.6
1,568,199	+				-0.3
1,568,199	+				-1.2
1,568,199	+				-0.2
1,568,199	+				-1.5
1,568,199	+				-1.4
1,568,199	+				+0.4
1,568,200	-				+0.3
1,568,200	-				-0.5
1,568,203	+				-0.7
1,568,203	+				-0.4
1,568,203	+				+0.2
1,568,203	+				-0.9
1,568,203	+				-0.1
1,568,203	+				-0.2
1,568,203	+				-1.2
1,568,204	-				-1.4
1,568,204	-				-0.9
1,568,204	-				-0.5
1,568,204	-				-1.9
1,568,204	-				-1.5
1,568,204	-				-1.5
1,568,204	-				+0.3
1,568,204	-				-1.7
1,568,204	-				-1.2
1,568,204	-				-1.1
1,568,204	-				-0.7
1,568,310	+		Psest_1460	0.13	+0.7
1,568,310	+		Psest_1460	0.13	-0.5
1,568,310	+		Psest_1460	0.13	+0.3
1,568,310	+		Psest_1460	0.13	+0.6
1,568,310	+		Psest_1460	0.13	+1.4
1,568,311	-		Psest_1460	0.13	+0.9
1,568,311	-		Psest_1460	0.13	-1.0