Experiment: Def Carbenicillin 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_1245 and Psest_1246 are separated by 77 nucleotides Psest_1246 and Psest_1247 are separated by 59 nucleotides
Psest_1245: Psest_1245 - protein-export membrane protein, SecD/SecF family, at 1,353,534 to 1,354,445
_1245
Psest_1246: Psest_1246 - Predicted outer membrane lipoprotein, at 1,354,523 to 1,355,056
_1246
Psest_1247: Psest_1247 - Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family, at 1,355,116 to 1,355,931
_1247
Position (kb)
1354
1355
1356 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1354.417 kb on + strand at 1354.417 kb on + strand at 1354.417 kb on + strand at 1354.417 kb on + strand at 1354.591 kb on + strand, within Psest_1246 at 1354.595 kb on + strand, within Psest_1246 at 1354.595 kb on + strand, within Psest_1246 at 1354.595 kb on + strand, within Psest_1246 at 1354.595 kb on + strand, within Psest_1246 at 1354.595 kb on + strand, within Psest_1246 at 1354.595 kb on + strand, within Psest_1246 at 1354.595 kb on + strand, within Psest_1246 at 1354.595 kb on + strand, within Psest_1246 at 1354.595 kb on + strand, within Psest_1246 at 1354.595 kb on + strand, within Psest_1246 at 1354.595 kb on + strand, within Psest_1246 at 1354.595 kb on + strand, within Psest_1246 at 1354.595 kb on + strand, within Psest_1246 at 1354.595 kb on + strand, within Psest_1246 at 1354.595 kb on + strand, within Psest_1246 at 1354.595 kb on + strand, within Psest_1246 at 1354.595 kb on + strand, within Psest_1246 at 1354.595 kb on + strand, within Psest_1246 at 1354.596 kb on - strand, within Psest_1246 at 1354.596 kb on - strand, within Psest_1246 at 1354.596 kb on - strand, within Psest_1246 at 1354.596 kb on - strand, within Psest_1246 at 1354.596 kb on - strand, within Psest_1246 at 1354.596 kb on - strand, within Psest_1246 at 1354.596 kb on - strand, within Psest_1246 at 1354.596 kb on - strand, within Psest_1246 at 1354.596 kb on - strand, within Psest_1246 at 1354.596 kb on - strand, within Psest_1246 at 1354.596 kb on - strand, within Psest_1246 at 1354.596 kb on - strand, within Psest_1246 at 1354.597 kb on + strand, within Psest_1246 at 1354.597 kb on + strand, within Psest_1246 at 1354.598 kb on - strand, within Psest_1246 at 1354.750 kb on - strand, within Psest_1246 at 1354.882 kb on + strand, within Psest_1246 at 1354.882 kb on + strand, within Psest_1246 at 1354.882 kb on + strand, within Psest_1246 at 1354.882 kb on + strand, within Psest_1246 at 1354.882 kb on + strand, within Psest_1246 at 1354.882 kb on + strand, within Psest_1246 at 1354.882 kb on + strand, within Psest_1246 at 1354.883 kb on - strand, within Psest_1246 at 1354.886 kb on + strand, within Psest_1246 at 1354.886 kb on + strand, within Psest_1246 at 1354.886 kb on + strand, within Psest_1246 at 1354.886 kb on + strand, within Psest_1246 at 1354.886 kb on + strand, within Psest_1246 at 1354.886 kb on + strand, within Psest_1246 at 1354.886 kb on + strand, within Psest_1246 at 1354.886 kb on + strand, within Psest_1246 at 1354.886 kb on + strand, within Psest_1246 at 1354.886 kb on + strand, within Psest_1246 at 1354.886 kb on + strand, within Psest_1246 at 1354.886 kb on + strand, within Psest_1246 at 1354.886 kb on + strand, within Psest_1246 at 1354.886 kb on + strand, within Psest_1246 at 1354.886 kb on + strand, within Psest_1246 at 1354.886 kb on + strand, within Psest_1246 at 1354.886 kb on + strand, within Psest_1246 at 1354.886 kb on + strand, within Psest_1246 at 1354.886 kb on + strand, within Psest_1246 at 1354.886 kb on + strand, within Psest_1246 at 1354.886 kb on + strand, within Psest_1246 at 1354.886 kb on + strand, within Psest_1246 at 1354.886 kb on + strand, within Psest_1246 at 1354.886 kb on + strand, within Psest_1246 at 1354.886 kb on + strand, within Psest_1246 at 1354.886 kb on + strand, within Psest_1246 at 1354.886 kb on + strand, within Psest_1246 at 1354.886 kb on + strand, within Psest_1246 at 1354.886 kb on + strand, within Psest_1246 at 1354.887 kb on - strand, within Psest_1246 at 1354.887 kb on - strand, within Psest_1246 at 1354.887 kb on - strand, within Psest_1246 at 1354.887 kb on - strand, within Psest_1246 at 1354.887 kb on - strand, within Psest_1246 at 1354.887 kb on - strand, within Psest_1246 at 1354.887 kb on - strand, within Psest_1246 at 1354.887 kb on - strand, within Psest_1246 at 1354.888 kb on + strand, within Psest_1246 at 1354.889 kb on - strand, within Psest_1246 at 1354.958 kb on + strand, within Psest_1246 at 1354.958 kb on + strand, within Psest_1246 at 1354.958 kb on + strand, within Psest_1246 at 1354.959 kb on - strand, within Psest_1246 at 1354.959 kb on - strand, within Psest_1246 at 1354.959 kb on - strand, within Psest_1246 at 1354.986 kb on + strand, within Psest_1246 at 1354.987 kb on - strand, within Psest_1246 at 1354.987 kb on - strand, within Psest_1246 at 1355.038 kb on - strand at 1355.038 kb on - strand at 1355.993 kb on + strand at 1355.993 kb on + strand at 1355.994 kb on - strand at 1355.994 kb on - strand at 1356.051 kb on + strand at 1356.052 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Def Carbenicillin 0.008 mg/ml remove 1,354,417 + +1.2 1,354,417 + +0.3 1,354,417 + -0.3 1,354,417 + +1.3 1,354,591 + Psest_1246 0.13 +0.3 1,354,595 + Psest_1246 0.13 +1.0 1,354,595 + Psest_1246 0.13 +0.8 1,354,595 + Psest_1246 0.13 -0.1 1,354,595 + Psest_1246 0.13 +0.7 1,354,595 + Psest_1246 0.13 +0.0 1,354,595 + Psest_1246 0.13 +1.4 1,354,595 + Psest_1246 0.13 +0.9 1,354,595 + Psest_1246 0.13 +0.5 1,354,595 + Psest_1246 0.13 +1.0 1,354,595 + Psest_1246 0.13 +0.8 1,354,595 + Psest_1246 0.13 -1.0 1,354,595 + Psest_1246 0.13 +0.4 1,354,595 + Psest_1246 0.13 +0.6 1,354,595 + Psest_1246 0.13 +0.0 1,354,595 + Psest_1246 0.13 +1.4 1,354,595 + Psest_1246 0.13 -0.7 1,354,595 + Psest_1246 0.13 -0.9 1,354,595 + Psest_1246 0.13 +0.7 1,354,596 - Psest_1246 0.14 -0.0 1,354,596 - Psest_1246 0.14 -0.3 1,354,596 - Psest_1246 0.14 -0.9 1,354,596 - Psest_1246 0.14 -1.4 1,354,596 - Psest_1246 0.14 -1.8 1,354,596 - Psest_1246 0.14 -1.8 1,354,596 - Psest_1246 0.14 -2.9 1,354,596 - Psest_1246 0.14 -1.0 1,354,596 - Psest_1246 0.14 +0.6 1,354,596 - Psest_1246 0.14 +0.0 1,354,596 - Psest_1246 0.14 -1.4 1,354,596 - Psest_1246 0.14 -1.3 1,354,597 + Psest_1246 0.14 +0.9 1,354,597 + Psest_1246 0.14 +0.1 1,354,598 - Psest_1246 0.14 -2.1 1,354,750 - Psest_1246 0.43 -1.6 1,354,882 + Psest_1246 0.67 +0.9 1,354,882 + Psest_1246 0.67 +1.2 1,354,882 + Psest_1246 0.67 -2.4 1,354,882 + Psest_1246 0.67 -0.4 1,354,882 + Psest_1246 0.67 +0.2 1,354,882 + Psest_1246 0.67 -1.7 1,354,882 + Psest_1246 0.67 -0.2 1,354,883 - Psest_1246 0.67 -1.2 1,354,886 + Psest_1246 0.68 +2.0 1,354,886 + Psest_1246 0.68 -0.1 1,354,886 + Psest_1246 0.68 +1.4 1,354,886 + Psest_1246 0.68 +0.9 1,354,886 + Psest_1246 0.68 +2.0 1,354,886 + Psest_1246 0.68 +1.3 1,354,886 + Psest_1246 0.68 -0.0 1,354,886 + Psest_1246 0.68 +0.5 1,354,886 + Psest_1246 0.68 +0.5 1,354,886 + Psest_1246 0.68 +0.2 1,354,886 + Psest_1246 0.68 +0.9 1,354,886 + Psest_1246 0.68 +0.8 1,354,886 + Psest_1246 0.68 +1.1 1,354,886 + Psest_1246 0.68 -1.4 1,354,886 + Psest_1246 0.68 -0.4 1,354,886 + Psest_1246 0.68 +0.8 1,354,886 + Psest_1246 0.68 +0.1 1,354,886 + Psest_1246 0.68 -0.5 1,354,886 + Psest_1246 0.68 +1.9 1,354,886 + Psest_1246 0.68 +2.3 1,354,886 + Psest_1246 0.68 +0.9 1,354,886 + Psest_1246 0.68 +0.6 1,354,886 + Psest_1246 0.68 +2.6 1,354,886 + Psest_1246 0.68 +1.1 1,354,886 + Psest_1246 0.68 -0.6 1,354,886 + Psest_1246 0.68 +0.4 1,354,886 + Psest_1246 0.68 +0.3 1,354,886 + Psest_1246 0.68 +1.2 1,354,886 + Psest_1246 0.68 -0.1 1,354,887 - Psest_1246 0.68 -2.0 1,354,887 - Psest_1246 0.68 -1.0 1,354,887 - Psest_1246 0.68 +0.3 1,354,887 - Psest_1246 0.68 -1.6 1,354,887 - Psest_1246 0.68 -2.4 1,354,887 - Psest_1246 0.68 -2.3 1,354,887 - Psest_1246 0.68 -2.3 1,354,887 - Psest_1246 0.68 -1.6 1,354,888 + Psest_1246 0.68 -0.9 1,354,889 - Psest_1246 0.69 -0.6 1,354,958 + Psest_1246 0.81 +1.5 1,354,958 + Psest_1246 0.81 +1.0 1,354,958 + Psest_1246 0.81 +1.2 1,354,959 - Psest_1246 0.82 -2.0 1,354,959 - Psest_1246 0.82 -1.7 1,354,959 - Psest_1246 0.82 -2.4 1,354,986 + Psest_1246 0.87 +1.6 1,354,987 - Psest_1246 0.87 -1.5 1,354,987 - Psest_1246 0.87 -0.4 1,355,038 - -0.9 1,355,038 - -1.6 1,355,993 + +0.8 1,355,993 + +0.8 1,355,994 - -1.1 1,355,994 - -2.3 1,356,051 + -1.6 1,356,052 - -1.2
Or see this region's nucleotide sequence