Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1171

Experiment: Def Carbenicillin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Def Carbenicillin 0.008 mg/ml
1,272,595	+		Psest_1170	0.28	-1.9
1,272,620	+		Psest_1170	0.30	-1.3
1,272,620	+		Psest_1170	0.30	-0.3
1,272,621	-		Psest_1170	0.30	-0.9
1,272,627	+		Psest_1170	0.30	-1.4
1,272,627	+		Psest_1170	0.30	+0.0
1,272,627	+		Psest_1170	0.30	+0.2
1,272,627	+		Psest_1170	0.30	+0.5
1,272,627	+		Psest_1170	0.30	-0.4
1,272,627	+		Psest_1170	0.30	+0.9
1,272,627	+		Psest_1170	0.30	-0.6
1,272,627	+		Psest_1170	0.30	+1.3
1,272,627	+		Psest_1170	0.30	-0.4
1,272,627	+		Psest_1170	0.30	-0.5
1,272,628	-		Psest_1170	0.30	-1.7
1,272,628	-		Psest_1170	0.30	-0.1
1,272,628	-		Psest_1170	0.30	-0.9
1,272,628	-		Psest_1170	0.30	-1.4
1,272,628	-		Psest_1170	0.30	-1.4
1,272,628	-		Psest_1170	0.30	-0.9
1,272,628	-		Psest_1170	0.30	-0.9
1,272,629	+		Psest_1170	0.31	+0.3
1,272,629	+		Psest_1170	0.31	-0.2
1,272,807	+		Psest_1170	0.45	-0.6
1,272,808	-		Psest_1170	0.46	-1.4
1,272,938	+		Psest_1170	0.56	+0.2
1,272,939	-		Psest_1170	0.57	-0.5
1,273,295	+		Psest_1170	0.86	+1.2
1,273,372	-				-1.3
1,273,530	+				+0.2
1,273,530	+				-2.1
1,273,530	+				+0.8
1,273,530	+				+0.8
1,273,530	+				-0.4
1,273,530	+				+0.0
1,273,531	-				-1.6
1,273,531	-				-0.4
1,273,534	+				-1.4
1,273,534	+				-1.0
1,273,534	+				+0.6
1,273,535	-				-0.5
1,273,535	-				-0.1
1,273,535	-				-1.7
1,273,660	+		Psest_1171	0.14	-0.4
1,273,660	+		Psest_1171	0.14	-0.9
1,273,715	+		Psest_1171	0.18	+0.1
1,273,715	+		Psest_1171	0.18	+0.7
1,273,715	+		Psest_1171	0.18	+0.2
1,273,716	-		Psest_1171	0.18	+1.4
1,273,716	-		Psest_1171	0.18	-0.4
1,273,716	-		Psest_1171	0.18	-0.9
1,273,872	+		Psest_1171	0.31	+0.1
1,273,873	-		Psest_1171	0.31	-0.3
1,274,270	+		Psest_1171	0.64	+0.1
1,274,297	+		Psest_1171	0.67	-1.0
1,274,297	+		Psest_1171	0.67	-2.2
1,274,457	+		Psest_1171	0.80	+0.8
1,274,458	-		Psest_1171	0.80	+0.7
1,274,475	+		Psest_1171	0.81	-1.4
1,274,733	-				-2.1
1,274,914	-				-0.7
1,275,011	-				+1.8
1,275,348	-				+0.3
1,275,367	+				-1.9
1,275,370	+				+0.5
1,275,370	+				+1.2
1,275,370	+				-0.9
1,275,370	+				+0.9
1,275,370	+				+0.4
1,275,370	+				-0.4
1,275,371	-				-0.6
1,275,371	-				-0.5
1,275,372	+				-0.0
1,275,372	+				-1.4
1,275,372	+				+1.3
1,275,372	+				-0.0
1,275,372	+				-0.1
1,275,372	+				+1.4
1,275,372	+				+0.2
1,275,372	+				-0.7
1,275,373	-				+0.4
1,275,373	-				-0.7
1,275,373	-				-1.0
1,275,373	-				-0.7
1,275,373	-				-1.1
1,275,373	-				-1.6
1,275,373	-				-1.1
1,275,373	-				-0.6
1,275,375	+				-0.5
1,275,376	-				-3.1
1,275,391	+				+0.6
1,275,549	+		Psest_1173	0.57	+0.4
1,275,549	+		Psest_1173	0.57	+0.2
1,275,549	+		Psest_1173	0.57	+0.6
1,275,550	-		Psest_1173	0.57	+2.4
1,275,550	-		Psest_1173	0.57	-0.6
1,275,573	-		Psest_1173	0.67	-0.4
1,275,573	-		Psest_1173	0.67	+2.0
1,275,573	-		Psest_1173	0.67	-2.6
1,275,582	-		Psest_1173	0.71	+1.0