Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1162
Experiment: Def Carbenicillin 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Def Carbenicillin 0.008 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 1,261,899 | + | Psest_1161 | 0.16 | +0.2 | |
| 1,261,900 | - | Psest_1161 | 0.16 | -0.5 | |
| 1,261,900 | - | Psest_1161 | 0.16 | -0.7 | |
| 1,262,260 | - | Psest_1161 | 0.56 | +1.2 | |
| 1,262,636 | + | +0.1 | |||
| 1,262,636 | + | -0.1 | |||
| 1,263,078 | - | Psest_1162 | 0.60 | -1.5 | |
| 1,263,078 | - | Psest_1162 | 0.60 | -1.0 | |
| 1,263,156 | - | Psest_1162 | 0.72 | -0.4 | |
| 1,263,336 | - | -1.8 | |||
| 1,263,336 | - | +0.1 | |||
| 1,263,336 | - | +0.7 | |||
| 1,263,448 | - | +0.9 | |||
| 1,264,212 | - | Psest_1163 | 0.36 | -1.2 |
Or see this region's nucleotide sequence