Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1135

Experiment: Def Carbenicillin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Def Carbenicillin 0.008 mg/ml
1,231,954	+		Psest_1134	0.82	+2.4
1,231,979	+		Psest_1134	0.83	+1.1
1,231,979	+		Psest_1134	0.83	+3.1
1,231,979	+		Psest_1134	0.83	+2.1
1,231,979	+		Psest_1134	0.83	+0.2
1,231,979	+		Psest_1134	0.83	+1.0
1,231,980	-		Psest_1134	0.83	-1.1
1,231,980	-		Psest_1134	0.83	-0.0
1,231,980	-		Psest_1134	0.83	+1.1
1,232,293	+				+0.8
1,232,293	+				-0.3
1,232,434	+				-2.0
1,232,434	+				-0.1
1,232,434	+				+1.8
1,232,434	+				+0.9
1,232,435	-				+2.2
1,232,435	-				+2.0
1,232,435	-				+1.7
1,232,435	-				+0.1
1,232,435	-				-0.6
1,232,435	-				+1.6
1,232,435	-				+1.6
1,232,435	-				+1.7
1,232,435	-				+2.5
1,232,435	-				+2.1
1,232,435	-				+1.5
1,232,435	-				+2.0
1,232,435	-				+1.8
1,232,435	-				+1.9
1,232,435	-				+0.5
1,232,435	-				+2.1
1,232,649	+		Psest_1135	0.17	+0.1
1,232,671	+		Psest_1135	0.19	-1.2
1,232,671	+		Psest_1135	0.19	+2.0
1,232,671	+		Psest_1135	0.19	-2.0
1,232,671	+		Psest_1135	0.19	+0.2
1,232,672	-		Psest_1135	0.19	+1.7
1,232,672	-		Psest_1135	0.19	+1.1
1,233,040	+		Psest_1135	0.51	+0.6
1,233,040	+		Psest_1135	0.51	+0.9
1,233,040	+		Psest_1135	0.51	+0.4
1,233,041	-		Psest_1135	0.51	-0.2
1,233,117	+		Psest_1135	0.58	+1.2
1,233,117	+		Psest_1135	0.58	+0.6
1,233,117	+		Psest_1135	0.58	+2.1
1,233,117	+		Psest_1135	0.58	+1.0
1,233,117	+		Psest_1135	0.58	-2.3
1,233,117	+		Psest_1135	0.58	+0.3
1,233,117	+		Psest_1135	0.58	+0.1
1,233,117	+		Psest_1135	0.58	-0.8
1,233,118	-		Psest_1135	0.58	+1.1
1,233,118	-		Psest_1135	0.58	-0.3
1,233,118	-		Psest_1135	0.58	-1.3
1,233,146	+		Psest_1135	0.61	+1.3
1,233,165	+		Psest_1135	0.62	+0.9
1,233,268	-		Psest_1135	0.71	+2.5
1,233,291	+		Psest_1135	0.73	+0.8
1,233,321	+		Psest_1135	0.76	-0.0
1,233,520	+				-1.7
1,233,583	-				+1.1
1,233,630	+				+0.6
1,233,847	+		Psest_1136	0.33	+0.9
1,233,848	-		Psest_1136	0.33	-0.4
1,233,848	-		Psest_1136	0.33	-0.8
1,233,848	-		Psest_1136	0.33	-0.0
1,233,911	-		Psest_1136	0.41	-1.3
1,233,911	-		Psest_1136	0.41	-1.7
1,233,986	-		Psest_1136	0.51	-1.2
1,233,986	-		Psest_1136	0.51	-0.6
1,234,116	-		Psest_1136	0.67	-0.0
1,234,116	-		Psest_1136	0.67	-0.7
1,234,192	-		Psest_1136	0.77	-0.8
1,234,265	-		Psest_1136	0.86	+0.1
1,234,376	+				+1.9
1,234,376	+				+0.9
1,234,377	-				-0.8
1,234,377	-				+0.2