Experiment: Def Benzethonium chloride 0.008 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_0618 and Psest_0619 are separated by 476 nucleotides Psest_0619 and Psest_0620 are separated by 214 nucleotides Psest_0620 and Psest_0621 are separated by 4 nucleotides
Psest_0618: Psest_0618 - hypothetical protein, at 670,581 to 670,811
_0618
Psest_0619: Psest_0619 - cation diffusion facilitator family transporter, at 671,288 to 672,208
_0619
Psest_0620: Psest_0620 - Putative protein-S-isoprenylcysteine methyltransferase, at 672,423 to 672,884
_0620
Psest_0621: Psest_0621 - Protein-disulfide isomerase, at 672,889 to 673,569
_0621
Position (kb) 671
672
673 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 670.390 kb on + strand at 670.421 kb on + strand at 670.421 kb on + strand at 670.435 kb on + strand at 670.436 kb on - strand at 670.436 kb on - strand at 670.437 kb on + strand at 670.437 kb on + strand at 670.437 kb on + strand at 670.794 kb on - strand at 670.811 kb on + strand at 670.937 kb on + strand at 671.080 kb on - strand at 671.226 kb on - strand at 671.308 kb on + strand at 671.419 kb on - strand, within Psest_0619 at 671.431 kb on - strand, within Psest_0619 at 671.435 kb on - strand, within Psest_0619 at 671.435 kb on - strand, within Psest_0619 at 671.480 kb on - strand, within Psest_0619 at 671.585 kb on + strand, within Psest_0619 at 671.594 kb on + strand, within Psest_0619 at 671.594 kb on + strand, within Psest_0619 at 671.602 kb on + strand, within Psest_0619 at 671.604 kb on + strand, within Psest_0619 at 671.604 kb on + strand, within Psest_0619 at 671.604 kb on + strand, within Psest_0619 at 671.604 kb on + strand, within Psest_0619 at 671.677 kb on - strand, within Psest_0619 at 671.677 kb on - strand, within Psest_0619 at 671.677 kb on - strand, within Psest_0619 at 671.714 kb on - strand, within Psest_0619 at 671.720 kb on - strand, within Psest_0619 at 671.728 kb on + strand, within Psest_0619 at 671.728 kb on + strand, within Psest_0619 at 671.786 kb on - strand, within Psest_0619 at 671.831 kb on - strand, within Psest_0619 at 671.831 kb on - strand, within Psest_0619 at 671.886 kb on + strand, within Psest_0619 at 671.945 kb on - strand, within Psest_0619 at 671.947 kb on - strand, within Psest_0619 at 671.994 kb on + strand, within Psest_0619 at 671.994 kb on + strand, within Psest_0619 at 671.994 kb on + strand, within Psest_0619 at 671.994 kb on + strand, within Psest_0619 at 671.994 kb on + strand, within Psest_0619 at 671.994 kb on + strand, within Psest_0619 at 671.994 kb on + strand, within Psest_0619 at 671.994 kb on + strand, within Psest_0619 at 671.995 kb on - strand, within Psest_0619 at 671.995 kb on - strand, within Psest_0619 at 671.995 kb on - strand, within Psest_0619 at 672.094 kb on - strand, within Psest_0619 at 672.094 kb on - strand, within Psest_0619 at 672.103 kb on - strand, within Psest_0619 at 672.150 kb on + strand at 672.151 kb on - strand at 672.206 kb on + strand at 672.206 kb on + strand at 672.206 kb on + strand at 672.206 kb on + strand at 672.206 kb on + strand at 672.206 kb on + strand at 672.206 kb on + strand at 672.207 kb on - strand at 672.207 kb on - strand at 672.207 kb on - strand at 672.207 kb on - strand at 672.207 kb on - strand at 672.236 kb on - strand at 672.236 kb on - strand at 672.243 kb on + strand at 672.243 kb on + strand at 672.243 kb on + strand at 672.243 kb on + strand at 672.243 kb on + strand at 672.244 kb on - strand at 672.244 kb on - strand at 672.355 kb on + strand at 672.356 kb on - strand at 672.356 kb on - strand at 672.523 kb on + strand, within Psest_0620 at 672.523 kb on + strand, within Psest_0620 at 672.523 kb on + strand, within Psest_0620 at 672.523 kb on + strand, within Psest_0620 at 672.523 kb on + strand, within Psest_0620 at 672.523 kb on + strand, within Psest_0620 at 672.523 kb on + strand, within Psest_0620 at 672.523 kb on + strand, within Psest_0620 at 672.523 kb on + strand, within Psest_0620 at 672.523 kb on + strand, within Psest_0620 at 672.523 kb on + strand, within Psest_0620 at 672.523 kb on + strand, within Psest_0620 at 672.523 kb on + strand, within Psest_0620 at 672.524 kb on - strand, within Psest_0620 at 672.524 kb on - strand, within Psest_0620 at 672.524 kb on - strand, within Psest_0620 at 672.524 kb on - strand, within Psest_0620 at 672.524 kb on - strand, within Psest_0620 at 672.524 kb on - strand, within Psest_0620 at 672.524 kb on - strand, within Psest_0620 at 672.524 kb on - strand, within Psest_0620 at 672.540 kb on + strand, within Psest_0620 at 672.541 kb on - strand, within Psest_0620 at 672.541 kb on - strand, within Psest_0620 at 672.541 kb on - strand, within Psest_0620 at 672.606 kb on + strand, within Psest_0620 at 672.606 kb on + strand, within Psest_0620 at 672.606 kb on + strand, within Psest_0620 at 672.607 kb on - strand, within Psest_0620 at 672.610 kb on + strand, within Psest_0620 at 672.610 kb on + strand, within Psest_0620 at 672.610 kb on + strand, within Psest_0620 at 672.610 kb on + strand, within Psest_0620 at 672.610 kb on + strand, within Psest_0620 at 672.610 kb on + strand, within Psest_0620 at 672.610 kb on + strand, within Psest_0620 at 672.611 kb on - strand, within Psest_0620 at 672.611 kb on - strand, within Psest_0620 at 672.611 kb on - strand, within Psest_0620 at 672.611 kb on - strand, within Psest_0620 at 672.611 kb on - strand, within Psest_0620 at 672.611 kb on - strand, within Psest_0620 at 672.611 kb on - strand, within Psest_0620 at 672.611 kb on - strand, within Psest_0620 at 672.611 kb on - strand, within Psest_0620 at 672.611 kb on - strand, within Psest_0620 at 672.611 kb on - strand, within Psest_0620 at 672.611 kb on - strand, within Psest_0620 at 672.611 kb on - strand, within Psest_0620 at 672.611 kb on - strand, within Psest_0620 at 672.611 kb on - strand, within Psest_0620 at 672.611 kb on - strand, within Psest_0620 at 672.611 kb on - strand, within Psest_0620 at 672.611 kb on - strand, within Psest_0620 at 672.611 kb on - strand, within Psest_0620 at 672.611 kb on - strand, within Psest_0620 at 672.611 kb on - strand, within Psest_0620 at 672.611 kb on - strand, within Psest_0620 at 672.611 kb on - strand, within Psest_0620 at 672.634 kb on + strand, within Psest_0620 at 672.634 kb on + strand, within Psest_0620 at 672.634 kb on + strand, within Psest_0620 at 672.635 kb on - strand, within Psest_0620 at 672.635 kb on - strand, within Psest_0620 at 672.651 kb on + strand, within Psest_0620 at 672.652 kb on - strand, within Psest_0620 at 672.689 kb on + strand, within Psest_0620 at 672.689 kb on + strand, within Psest_0620 at 672.689 kb on + strand, within Psest_0620 at 672.689 kb on + strand, within Psest_0620 at 672.689 kb on + strand, within Psest_0620 at 672.690 kb on - strand, within Psest_0620 at 672.690 kb on - strand, within Psest_0620 at 672.692 kb on + strand, within Psest_0620 at 672.693 kb on - strand, within Psest_0620 at 672.693 kb on - strand, within Psest_0620 at 672.750 kb on + strand, within Psest_0620 at 672.750 kb on + strand, within Psest_0620 at 672.884 kb on + strand at 672.885 kb on - strand at 672.885 kb on - strand at 672.885 kb on - strand at 672.885 kb on - strand at 673.009 kb on - strand, within Psest_0621 at 673.009 kb on - strand, within Psest_0621 at 673.053 kb on + strand, within Psest_0621 at 673.053 kb on + strand, within Psest_0621 at 673.053 kb on + strand, within Psest_0621 at 673.053 kb on + strand, within Psest_0621 at 673.053 kb on + strand, within Psest_0621 at 673.053 kb on + strand, within Psest_0621 at 673.054 kb on - strand, within Psest_0621 at 673.054 kb on - strand, within Psest_0621 at 673.121 kb on - strand, within Psest_0621
Per-strain Table
Position Strand Gene LocusTag Fraction Def Benzethonium chloride 0.008 mM remove 670,390 + +0.8 670,421 + -0.7 670,421 + -0.8 670,435 + -1.1 670,436 - -0.8 670,436 - -1.7 670,437 + -0.8 670,437 + +0.0 670,437 + -0.9 670,794 - +0.9 670,811 + -0.3 670,937 + -1.0 671,080 - -3.2 671,226 - +1.5 671,308 + -0.6 671,419 - Psest_0619 0.14 -0.3 671,431 - Psest_0619 0.16 -0.7 671,435 - Psest_0619 0.16 +0.1 671,435 - Psest_0619 0.16 +0.7 671,480 - Psest_0619 0.21 -1.2 671,585 + Psest_0619 0.32 -0.8 671,594 + Psest_0619 0.33 -0.5 671,594 + Psest_0619 0.33 -2.1 671,602 + Psest_0619 0.34 -0.7 671,604 + Psest_0619 0.34 +0.1 671,604 + Psest_0619 0.34 -0.5 671,604 + Psest_0619 0.34 -0.3 671,604 + Psest_0619 0.34 +0.2 671,677 - Psest_0619 0.42 -0.9 671,677 - Psest_0619 0.42 -0.4 671,677 - Psest_0619 0.42 -1.4 671,714 - Psest_0619 0.46 -1.6 671,720 - Psest_0619 0.47 -1.2 671,728 + Psest_0619 0.48 -0.9 671,728 + Psest_0619 0.48 -0.4 671,786 - Psest_0619 0.54 -0.4 671,831 - Psest_0619 0.59 -1.4 671,831 - Psest_0619 0.59 -1.3 671,886 + Psest_0619 0.65 +0.2 671,945 - Psest_0619 0.71 -0.0 671,947 - Psest_0619 0.72 +0.2 671,994 + Psest_0619 0.77 +0.1 671,994 + Psest_0619 0.77 +0.1 671,994 + Psest_0619 0.77 -0.4 671,994 + Psest_0619 0.77 +3.4 671,994 + Psest_0619 0.77 -2.0 671,994 + Psest_0619 0.77 -1.1 671,994 + Psest_0619 0.77 +0.0 671,994 + Psest_0619 0.77 -0.2 671,995 - Psest_0619 0.77 -1.8 671,995 - Psest_0619 0.77 -3.4 671,995 - Psest_0619 0.77 -2.2 672,094 - Psest_0619 0.88 -2.0 672,094 - Psest_0619 0.88 -0.8 672,103 - Psest_0619 0.88 -0.1 672,150 + +0.2 672,151 - -1.9 672,206 + +0.0 672,206 + -0.5 672,206 + +1.0 672,206 + +0.4 672,206 + +0.0 672,206 + -1.0 672,206 + +0.7 672,207 - -0.3 672,207 - +1.8 672,207 - +0.2 672,207 - -0.7 672,207 - +1.0 672,236 - -3.3 672,236 - -0.2 672,243 + +0.5 672,243 + +0.2 672,243 + +0.2 672,243 + +0.7 672,243 + -1.3 672,244 - -1.7 672,244 - +0.1 672,355 + -0.1 672,356 - -1.5 672,356 - -1.0 672,523 + Psest_0620 0.22 -1.7 672,523 + Psest_0620 0.22 -0.4 672,523 + Psest_0620 0.22 -0.4 672,523 + Psest_0620 0.22 -0.7 672,523 + Psest_0620 0.22 +0.4 672,523 + Psest_0620 0.22 -1.7 672,523 + Psest_0620 0.22 +0.8 672,523 + Psest_0620 0.22 -0.3 672,523 + Psest_0620 0.22 -0.8 672,523 + Psest_0620 0.22 +0.9 672,523 + Psest_0620 0.22 +0.4 672,523 + Psest_0620 0.22 -0.8 672,523 + Psest_0620 0.22 -0.6 672,524 - Psest_0620 0.22 -0.8 672,524 - Psest_0620 0.22 +0.3 672,524 - Psest_0620 0.22 -0.1 672,524 - Psest_0620 0.22 -1.2 672,524 - Psest_0620 0.22 -0.1 672,524 - Psest_0620 0.22 +1.1 672,524 - Psest_0620 0.22 +0.1 672,524 - Psest_0620 0.22 -0.6 672,540 + Psest_0620 0.25 -0.7 672,541 - Psest_0620 0.26 -0.5 672,541 - Psest_0620 0.26 +0.3 672,541 - Psest_0620 0.26 -0.3 672,606 + Psest_0620 0.40 -0.0 672,606 + Psest_0620 0.40 -0.8 672,606 + Psest_0620 0.40 -0.2 672,607 - Psest_0620 0.40 +2.2 672,610 + Psest_0620 0.40 +0.1 672,610 + Psest_0620 0.40 -0.7 672,610 + Psest_0620 0.40 -0.5 672,610 + Psest_0620 0.40 -0.3 672,610 + Psest_0620 0.40 -0.6 672,610 + Psest_0620 0.40 -0.5 672,610 + Psest_0620 0.40 +0.0 672,611 - Psest_0620 0.41 +1.1 672,611 - Psest_0620 0.41 +0.2 672,611 - Psest_0620 0.41 +0.2 672,611 - Psest_0620 0.41 +0.7 672,611 - Psest_0620 0.41 +0.3 672,611 - Psest_0620 0.41 +0.6 672,611 - Psest_0620 0.41 +1.1 672,611 - Psest_0620 0.41 +0.7 672,611 - Psest_0620 0.41 +0.2 672,611 - Psest_0620 0.41 -0.3 672,611 - Psest_0620 0.41 +0.3 672,611 - Psest_0620 0.41 +0.5 672,611 - Psest_0620 0.41 +0.7 672,611 - Psest_0620 0.41 +0.7 672,611 - Psest_0620 0.41 +0.4 672,611 - Psest_0620 0.41 +1.0 672,611 - Psest_0620 0.41 +1.2 672,611 - Psest_0620 0.41 +1.3 672,611 - Psest_0620 0.41 +0.6 672,611 - Psest_0620 0.41 +0.9 672,611 - Psest_0620 0.41 +0.9 672,611 - Psest_0620 0.41 +2.3 672,611 - Psest_0620 0.41 +1.3 672,634 + Psest_0620 0.46 -0.4 672,634 + Psest_0620 0.46 -0.9 672,634 + Psest_0620 0.46 -0.5 672,635 - Psest_0620 0.46 -0.0 672,635 - Psest_0620 0.46 +1.0 672,651 + Psest_0620 0.49 -0.7 672,652 - Psest_0620 0.50 +0.3 672,689 + Psest_0620 0.58 -0.5 672,689 + Psest_0620 0.58 +0.1 672,689 + Psest_0620 0.58 +0.1 672,689 + Psest_0620 0.58 +0.3 672,689 + Psest_0620 0.58 +0.3 672,690 - Psest_0620 0.58 +1.4 672,690 - Psest_0620 0.58 +0.8 672,692 + Psest_0620 0.58 -1.2 672,693 - Psest_0620 0.58 +0.1 672,693 - Psest_0620 0.58 +1.0 672,750 + Psest_0620 0.71 +0.1 672,750 + Psest_0620 0.71 +1.1 672,884 + +0.8 672,885 - +1.5 672,885 - +0.4 672,885 - -0.3 672,885 - -0.6 673,009 - Psest_0621 0.18 -1.0 673,009 - Psest_0621 0.18 -0.9 673,053 + Psest_0621 0.24 -1.3 673,053 + Psest_0621 0.24 -0.2 673,053 + Psest_0621 0.24 -0.6 673,053 + Psest_0621 0.24 -0.4 673,053 + Psest_0621 0.24 -0.9 673,053 + Psest_0621 0.24 -2.0 673,054 - Psest_0621 0.24 -0.5 673,054 - Psest_0621 0.24 +0.4 673,121 - Psest_0621 0.34 +0.6
Or see this region's nucleotide sequence