Experiment: Def Benzethonium chloride 0.008 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_4178 and Psest_4179 overlap by 7 nucleotides Psest_4179 and Psest_4180 are separated by 21 nucleotides Psest_4180 and Psest_4181 overlap by 8 nucleotides
Psest_4178: Psest_4178 - hypothetical protein, at 4,356,290 to 4,357,162
_4178
Psest_4179: Psest_4179 - Flagellar biosynthesis pathway, component FliQ, at 4,357,156 to 4,357,428
_4179
Psest_4180: Psest_4180 - Flagellar biosynthesis pathway, component FliR, at 4,357,450 to 4,358,136
_4180
Psest_4181: Psest_4181 - Flagellar biosynthesis pathway, component FlhB, at 4,358,129 to 4,359,271
_4181
Position (kb)
4357
4358
4359 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4356.680 kb on - strand, within Psest_4178 at 4356.680 kb on - strand, within Psest_4178 at 4356.729 kb on - strand, within Psest_4178 at 4356.729 kb on - strand, within Psest_4178 at 4356.926 kb on + strand, within Psest_4178 at 4356.926 kb on + strand, within Psest_4178 at 4357.086 kb on - strand at 4357.125 kb on - strand at 4357.125 kb on - strand at 4357.125 kb on - strand at 4357.125 kb on - strand at 4357.125 kb on - strand at 4357.125 kb on - strand at 4357.125 kb on - strand at 4357.125 kb on - strand at 4357.125 kb on - strand at 4357.125 kb on - strand at 4357.125 kb on - strand at 4357.126 kb on + strand at 4357.126 kb on + strand at 4357.135 kb on + strand at 4357.135 kb on + strand at 4357.160 kb on + strand at 4357.160 kb on + strand at 4357.161 kb on - strand at 4357.161 kb on - strand at 4357.161 kb on - strand at 4357.161 kb on - strand at 4357.466 kb on - strand at 4357.486 kb on + strand at 4357.560 kb on - strand, within Psest_4180 at 4357.560 kb on - strand, within Psest_4180 at 4357.729 kb on + strand, within Psest_4180 at 4357.729 kb on + strand, within Psest_4180 at 4357.730 kb on - strand, within Psest_4180 at 4357.730 kb on - strand, within Psest_4180 at 4357.730 kb on - strand, within Psest_4180 at 4357.730 kb on - strand, within Psest_4180 at 4357.738 kb on + strand, within Psest_4180 at 4357.738 kb on + strand, within Psest_4180 at 4357.738 kb on + strand, within Psest_4180 at 4357.738 kb on + strand, within Psest_4180 at 4357.738 kb on + strand, within Psest_4180 at 4357.738 kb on + strand, within Psest_4180 at 4357.739 kb on - strand, within Psest_4180 at 4357.739 kb on - strand, within Psest_4180 at 4357.739 kb on - strand, within Psest_4180 at 4357.739 kb on - strand, within Psest_4180 at 4357.739 kb on - strand, within Psest_4180 at 4357.739 kb on - strand, within Psest_4180 at 4357.739 kb on - strand, within Psest_4180 at 4357.739 kb on - strand, within Psest_4180 at 4357.794 kb on - strand, within Psest_4180 at 4357.804 kb on + strand, within Psest_4180 at 4357.804 kb on + strand, within Psest_4180 at 4357.804 kb on + strand, within Psest_4180 at 4357.804 kb on + strand, within Psest_4180 at 4357.804 kb on + strand, within Psest_4180 at 4357.804 kb on + strand, within Psest_4180 at 4357.805 kb on - strand, within Psest_4180 at 4357.805 kb on - strand, within Psest_4180 at 4357.805 kb on - strand, within Psest_4180 at 4357.819 kb on + strand, within Psest_4180 at 4357.820 kb on - strand, within Psest_4180 at 4357.846 kb on + strand, within Psest_4180 at 4357.847 kb on - strand, within Psest_4180 at 4357.864 kb on - strand, within Psest_4180 at 4358.038 kb on + strand, within Psest_4180 at 4358.038 kb on + strand, within Psest_4180 at 4358.039 kb on - strand, within Psest_4180 at 4358.039 kb on - strand, within Psest_4180 at 4358.069 kb on - strand at 4358.069 kb on - strand at 4358.109 kb on - strand at 4358.319 kb on - strand, within Psest_4181 at 4358.324 kb on + strand, within Psest_4181 at 4358.324 kb on + strand, within Psest_4181 at 4358.324 kb on + strand, within Psest_4181 at 4358.324 kb on + strand, within Psest_4181 at 4358.324 kb on + strand, within Psest_4181 at 4358.324 kb on + strand, within Psest_4181 at 4358.324 kb on + strand, within Psest_4181 at 4358.324 kb on + strand, within Psest_4181 at 4358.324 kb on + strand, within Psest_4181 at 4358.324 kb on + strand, within Psest_4181 at 4358.324 kb on + strand, within Psest_4181 at 4358.324 kb on + strand, within Psest_4181 at 4358.324 kb on + strand, within Psest_4181 at 4358.324 kb on + strand, within Psest_4181 at 4358.324 kb on + strand, within Psest_4181 at 4358.325 kb on - strand, within Psest_4181 at 4358.325 kb on - strand, within Psest_4181 at 4358.325 kb on - strand, within Psest_4181 at 4358.325 kb on - strand, within Psest_4181 at 4358.325 kb on - strand, within Psest_4181 at 4358.325 kb on - strand, within Psest_4181 at 4358.325 kb on - strand, within Psest_4181 at 4358.325 kb on - strand, within Psest_4181 at 4358.325 kb on - strand, within Psest_4181 at 4358.325 kb on - strand, within Psest_4181 at 4358.325 kb on - strand, within Psest_4181 at 4358.325 kb on - strand, within Psest_4181 at 4358.325 kb on - strand, within Psest_4181 at 4358.326 kb on + strand, within Psest_4181 at 4358.327 kb on - strand, within Psest_4181 at 4358.621 kb on + strand, within Psest_4181 at 4358.621 kb on + strand, within Psest_4181 at 4358.621 kb on + strand, within Psest_4181 at 4358.621 kb on + strand, within Psest_4181 at 4358.621 kb on + strand, within Psest_4181 at 4358.621 kb on + strand at 4358.621 kb on + strand, within Psest_4181 at 4358.622 kb on - strand, within Psest_4181 at 4358.622 kb on - strand, within Psest_4181 at 4358.622 kb on - strand, within Psest_4181 at 4358.622 kb on - strand, within Psest_4181 at 4358.622 kb on - strand, within Psest_4181 at 4358.622 kb on - strand, within Psest_4181 at 4358.627 kb on - strand, within Psest_4181 at 4358.945 kb on + strand, within Psest_4181 at 4358.963 kb on + strand, within Psest_4181 at 4358.963 kb on + strand, within Psest_4181 at 4358.964 kb on - strand, within Psest_4181 at 4358.964 kb on - strand, within Psest_4181 at 4359.026 kb on + strand, within Psest_4181 at 4359.026 kb on + strand, within Psest_4181 at 4359.026 kb on + strand, within Psest_4181 at 4359.026 kb on + strand, within Psest_4181 at 4359.026 kb on + strand, within Psest_4181 at 4359.026 kb on + strand, within Psest_4181 at 4359.026 kb on + strand, within Psest_4181 at 4359.027 kb on - strand, within Psest_4181 at 4359.027 kb on - strand, within Psest_4181 at 4359.027 kb on - strand, within Psest_4181 at 4359.027 kb on - strand, within Psest_4181 at 4359.027 kb on - strand, within Psest_4181 at 4359.027 kb on - strand, within Psest_4181 at 4359.027 kb on - strand, within Psest_4181 at 4359.027 kb on - strand, within Psest_4181 at 4359.027 kb on - strand, within Psest_4181 at 4359.027 kb on - strand, within Psest_4181 at 4359.095 kb on + strand, within Psest_4181 at 4359.095 kb on + strand, within Psest_4181 at 4359.095 kb on + strand, within Psest_4181 at 4359.096 kb on - strand, within Psest_4181 at 4359.096 kb on - strand, within Psest_4181 at 4359.098 kb on + strand, within Psest_4181 at 4359.098 kb on + strand, within Psest_4181 at 4359.099 kb on - strand, within Psest_4181 at 4359.099 kb on - strand, within Psest_4181 at 4359.099 kb on - strand, within Psest_4181 at 4359.099 kb on - strand, within Psest_4181 at 4359.099 kb on - strand, within Psest_4181 at 4359.099 kb on - strand, within Psest_4181 at 4359.099 kb on - strand, within Psest_4181
Per-strain Table
Position Strand Gene LocusTag Fraction Def Benzethonium chloride 0.008 mM remove 4,356,680 - Psest_4178 0.45 +1.2 4,356,680 - Psest_4178 0.45 +2.0 4,356,729 - Psest_4178 0.50 +0.7 4,356,729 - Psest_4178 0.50 +0.4 4,356,926 + Psest_4178 0.73 +0.3 4,356,926 + Psest_4178 0.73 -0.9 4,357,086 - +0.3 4,357,125 - +0.9 4,357,125 - +1.4 4,357,125 - +1.1 4,357,125 - -0.1 4,357,125 - +1.6 4,357,125 - +1.5 4,357,125 - +0.2 4,357,125 - +1.0 4,357,125 - +0.4 4,357,125 - +0.8 4,357,125 - +0.7 4,357,126 + -0.5 4,357,126 + -2.1 4,357,135 + -1.8 4,357,135 + -1.0 4,357,160 + +0.6 4,357,160 + -1.0 4,357,161 - +0.7 4,357,161 - +0.6 4,357,161 - +0.2 4,357,161 - +0.0 4,357,466 - +1.1 4,357,486 + -0.2 4,357,560 - Psest_4180 0.16 +0.1 4,357,560 - Psest_4180 0.16 +1.0 4,357,729 + Psest_4180 0.41 -0.1 4,357,729 + Psest_4180 0.41 -0.7 4,357,730 - Psest_4180 0.41 +0.9 4,357,730 - Psest_4180 0.41 +0.7 4,357,730 - Psest_4180 0.41 -0.3 4,357,730 - Psest_4180 0.41 +0.7 4,357,738 + Psest_4180 0.42 +0.3 4,357,738 + Psest_4180 0.42 -0.5 4,357,738 + Psest_4180 0.42 -0.0 4,357,738 + Psest_4180 0.42 -0.1 4,357,738 + Psest_4180 0.42 +0.2 4,357,738 + Psest_4180 0.42 +0.1 4,357,739 - Psest_4180 0.42 +1.5 4,357,739 - Psest_4180 0.42 +0.6 4,357,739 - Psest_4180 0.42 +0.9 4,357,739 - Psest_4180 0.42 +1.2 4,357,739 - Psest_4180 0.42 +1.2 4,357,739 - Psest_4180 0.42 +1.7 4,357,739 - Psest_4180 0.42 +1.4 4,357,739 - Psest_4180 0.42 +0.7 4,357,794 - Psest_4180 0.50 +0.6 4,357,804 + Psest_4180 0.52 +1.0 4,357,804 + Psest_4180 0.52 +1.2 4,357,804 + Psest_4180 0.52 +1.1 4,357,804 + Psest_4180 0.52 +0.5 4,357,804 + Psest_4180 0.52 +0.5 4,357,804 + Psest_4180 0.52 +0.1 4,357,805 - Psest_4180 0.52 +0.7 4,357,805 - Psest_4180 0.52 -0.4 4,357,805 - Psest_4180 0.52 +0.2 4,357,819 + Psest_4180 0.54 -0.7 4,357,820 - Psest_4180 0.54 +1.4 4,357,846 + Psest_4180 0.58 +0.4 4,357,847 - Psest_4180 0.58 +0.2 4,357,864 - Psest_4180 0.60 -0.1 4,358,038 + Psest_4180 0.86 -1.8 4,358,038 + Psest_4180 0.86 -0.6 4,358,039 - Psest_4180 0.86 -0.1 4,358,039 - Psest_4180 0.86 +0.2 4,358,069 - +0.9 4,358,069 - -0.3 4,358,109 - +0.3 4,358,319 - Psest_4181 0.17 -0.7 4,358,324 + Psest_4181 0.17 +0.2 4,358,324 + Psest_4181 0.17 -1.4 4,358,324 + Psest_4181 0.17 -0.2 4,358,324 + Psest_4181 0.17 -0.8 4,358,324 + Psest_4181 0.17 -0.1 4,358,324 + Psest_4181 0.17 -0.1 4,358,324 + Psest_4181 0.17 -0.3 4,358,324 + Psest_4181 0.17 -0.9 4,358,324 + Psest_4181 0.17 -1.0 4,358,324 + Psest_4181 0.17 -0.9 4,358,324 + Psest_4181 0.17 +0.0 4,358,324 + Psest_4181 0.17 -0.7 4,358,324 + Psest_4181 0.17 -0.1 4,358,324 + Psest_4181 0.17 +0.2 4,358,324 + Psest_4181 0.17 -0.6 4,358,325 - Psest_4181 0.17 +0.1 4,358,325 - Psest_4181 0.17 +0.8 4,358,325 - Psest_4181 0.17 +0.0 4,358,325 - Psest_4181 0.17 +0.9 4,358,325 - Psest_4181 0.17 +0.7 4,358,325 - Psest_4181 0.17 +1.5 4,358,325 - Psest_4181 0.17 +0.9 4,358,325 - Psest_4181 0.17 +1.1 4,358,325 - Psest_4181 0.17 +1.0 4,358,325 - Psest_4181 0.17 +1.5 4,358,325 - Psest_4181 0.17 +1.0 4,358,325 - Psest_4181 0.17 -0.3 4,358,325 - Psest_4181 0.17 -0.0 4,358,326 + Psest_4181 0.17 -1.9 4,358,327 - Psest_4181 0.17 +0.6 4,358,621 + Psest_4181 0.43 +0.3 4,358,621 + Psest_4181 0.43 +0.8 4,358,621 + Psest_4181 0.43 +0.1 4,358,621 + Psest_4181 0.43 +1.6 4,358,621 + Psest_4181 0.43 +0.0 4,358,621 + +0.6 4,358,621 + Psest_4181 0.43 +0.7 4,358,622 - Psest_4181 0.43 +0.2 4,358,622 - Psest_4181 0.43 +1.1 4,358,622 - Psest_4181 0.43 -0.6 4,358,622 - Psest_4181 0.43 +0.2 4,358,622 - Psest_4181 0.43 -1.0 4,358,622 - Psest_4181 0.43 -1.5 4,358,627 - Psest_4181 0.44 +0.0 4,358,945 + Psest_4181 0.71 -1.0 4,358,963 + Psest_4181 0.73 -0.3 4,358,963 + Psest_4181 0.73 -1.2 4,358,964 - Psest_4181 0.73 -0.8 4,358,964 - Psest_4181 0.73 +0.2 4,359,026 + Psest_4181 0.78 -0.6 4,359,026 + Psest_4181 0.78 -1.5 4,359,026 + Psest_4181 0.78 +0.7 4,359,026 + Psest_4181 0.78 -0.1 4,359,026 + Psest_4181 0.78 -2.8 4,359,026 + Psest_4181 0.78 -0.1 4,359,026 + Psest_4181 0.78 -0.3 4,359,027 - Psest_4181 0.79 -3.4 4,359,027 - Psest_4181 0.79 +0.1 4,359,027 - Psest_4181 0.79 +0.3 4,359,027 - Psest_4181 0.79 -0.3 4,359,027 - Psest_4181 0.79 -0.8 4,359,027 - Psest_4181 0.79 +0.5 4,359,027 - Psest_4181 0.79 +0.6 4,359,027 - Psest_4181 0.79 -0.8 4,359,027 - Psest_4181 0.79 +0.7 4,359,027 - Psest_4181 0.79 -0.7 4,359,095 + Psest_4181 0.85 -1.1 4,359,095 + Psest_4181 0.85 +0.3 4,359,095 + Psest_4181 0.85 +0.4 4,359,096 - Psest_4181 0.85 -0.1 4,359,096 - Psest_4181 0.85 -1.8 4,359,098 + Psest_4181 0.85 -1.4 4,359,098 + Psest_4181 0.85 -0.1 4,359,099 - Psest_4181 0.85 -0.3 4,359,099 - Psest_4181 0.85 +0.7 4,359,099 - Psest_4181 0.85 +0.9 4,359,099 - Psest_4181 0.85 +0.6 4,359,099 - Psest_4181 0.85 -0.2 4,359,099 - Psest_4181 0.85 -0.3 4,359,099 - Psest_4181 0.85 +0.3
Or see this region's nucleotide sequence