Experiment: Def Benzethonium chloride 0.008 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_4079 and Psest_4080 are separated by 16 nucleotides Psest_4080 and Psest_4081 are separated by 39 nucleotides Psest_4081 and Psest_4082 are separated by 64 nucleotides Psest_4082 and Psest_4083 are separated by 1 nucleotides
Psest_4079: Psest_4079 - ABC-type amino acid transport/signal transduction systems, periplasmic component/domain, at 4,255,208 to 4,256,017
_4079
Psest_4080: Psest_4080 - Carbonic anhydrase, at 4,256,034 to 4,256,732
_4080
Psest_4081: Psest_4081 - Glutaminase (EC 3.5.1.2) <small>(from data)</small>, at 4,256,772 to 4,257,680
_4081
Psest_4082: Psest_4082 - hypothetical protein, at 4,257,745 to 4,258,047
_4082
Psest_4083: Psest_4083 - Predicted permease, at 4,258,049 to 4,258,990
_4083
Position (kb) 4256
4257
4258 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 4255.859 kb on + strand, within Psest_4079 at 4255.879 kb on + strand, within Psest_4079 at 4255.879 kb on + strand, within Psest_4079 at 4255.880 kb on - strand, within Psest_4079 at 4255.880 kb on - strand, within Psest_4079 at 4255.973 kb on + strand at 4255.973 kb on + strand at 4255.973 kb on + strand at 4256.047 kb on + strand at 4256.119 kb on + strand, within Psest_4080 at 4256.119 kb on + strand, within Psest_4080 at 4256.119 kb on + strand, within Psest_4080 at 4256.120 kb on - strand, within Psest_4080 at 4256.149 kb on + strand, within Psest_4080 at 4256.149 kb on + strand, within Psest_4080 at 4256.149 kb on + strand, within Psest_4080 at 4256.150 kb on - strand, within Psest_4080 at 4256.150 kb on - strand, within Psest_4080 at 4256.582 kb on + strand, within Psest_4080 at 4256.582 kb on + strand, within Psest_4080 at 4256.648 kb on - strand, within Psest_4080 at 4256.648 kb on - strand, within Psest_4080 at 4256.750 kb on - strand at 4256.968 kb on + strand, within Psest_4081 at 4256.969 kb on - strand, within Psest_4081 at 4257.124 kb on + strand, within Psest_4081 at 4257.124 kb on + strand, within Psest_4081 at 4257.124 kb on + strand, within Psest_4081 at 4257.124 kb on + strand, within Psest_4081 at 4257.125 kb on - strand, within Psest_4081 at 4257.125 kb on - strand, within Psest_4081 at 4257.125 kb on - strand, within Psest_4081 at 4257.125 kb on - strand, within Psest_4081 at 4257.181 kb on + strand, within Psest_4081 at 4257.181 kb on + strand, within Psest_4081 at 4257.181 kb on + strand, within Psest_4081 at 4257.182 kb on - strand, within Psest_4081 at 4257.215 kb on - strand, within Psest_4081 at 4257.610 kb on + strand at 4257.610 kb on + strand at 4257.611 kb on - strand at 4257.611 kb on - strand at 4257.611 kb on - strand at 4257.786 kb on - strand, within Psest_4082 at 4257.786 kb on - strand, within Psest_4082 at 4257.809 kb on + strand, within Psest_4082 at 4257.809 kb on + strand, within Psest_4082 at 4257.810 kb on - strand, within Psest_4082 at 4257.812 kb on + strand, within Psest_4082 at 4257.813 kb on - strand, within Psest_4082 at 4258.090 kb on - strand at 4258.206 kb on + strand, within Psest_4083 at 4258.206 kb on + strand, within Psest_4083 at 4258.206 kb on + strand, within Psest_4083 at 4258.428 kb on + strand, within Psest_4083 at 4258.429 kb on - strand, within Psest_4083 at 4258.429 kb on - strand, within Psest_4083 at 4258.627 kb on + strand, within Psest_4083 at 4258.627 kb on + strand, within Psest_4083 at 4258.627 kb on + strand, within Psest_4083 at 4258.628 kb on - strand, within Psest_4083 at 4258.628 kb on - strand, within Psest_4083 at 4258.628 kb on - strand, within Psest_4083 at 4258.628 kb on - strand, within Psest_4083 at 4258.628 kb on - strand, within Psest_4083 at 4258.628 kb on - strand, within Psest_4083 at 4258.628 kb on - strand, within Psest_4083 at 4258.629 kb on + strand, within Psest_4083 at 4258.629 kb on + strand, within Psest_4083 at 4258.629 kb on + strand, within Psest_4083 at 4258.629 kb on + strand, within Psest_4083 at 4258.629 kb on + strand, within Psest_4083 at 4258.629 kb on + strand, within Psest_4083 at 4258.629 kb on + strand, within Psest_4083 at 4258.629 kb on + strand, within Psest_4083 at 4258.629 kb on + strand, within Psest_4083 at 4258.629 kb on + strand, within Psest_4083 at 4258.629 kb on + strand, within Psest_4083 at 4258.629 kb on + strand, within Psest_4083 at 4258.629 kb on + strand, within Psest_4083 at 4258.629 kb on + strand, within Psest_4083 at 4258.629 kb on + strand, within Psest_4083 at 4258.629 kb on + strand, within Psest_4083 at 4258.629 kb on + strand, within Psest_4083 at 4258.629 kb on + strand, within Psest_4083 at 4258.629 kb on + strand, within Psest_4083 at 4258.629 kb on + strand, within Psest_4083 at 4258.629 kb on + strand, within Psest_4083 at 4258.629 kb on + strand, within Psest_4083 at 4258.629 kb on + strand, within Psest_4083 at 4258.629 kb on + strand, within Psest_4083 at 4258.629 kb on + strand, within Psest_4083 at 4258.629 kb on + strand, within Psest_4083 at 4258.629 kb on + strand, within Psest_4083 at 4258.629 kb on + strand, within Psest_4083 at 4258.629 kb on + strand, within Psest_4083 at 4258.629 kb on + strand, within Psest_4083 at 4258.629 kb on + strand, within Psest_4083 at 4258.629 kb on + strand, within Psest_4083 at 4258.629 kb on + strand, within Psest_4083 at 4258.629 kb on + strand, within Psest_4083 at 4258.629 kb on + strand, within Psest_4083 at 4258.629 kb on + strand, within Psest_4083 at 4258.629 kb on + strand, within Psest_4083 at 4258.629 kb on + strand, within Psest_4083 at 4258.629 kb on + strand, within Psest_4083 at 4258.629 kb on + strand, within Psest_4083 at 4258.629 kb on + strand, within Psest_4083 at 4258.629 kb on + strand, within Psest_4083 at 4258.629 kb on + strand, within Psest_4083 at 4258.629 kb on + strand, within Psest_4083 at 4258.630 kb on - strand, within Psest_4083 at 4258.630 kb on - strand, within Psest_4083 at 4258.630 kb on - strand, within Psest_4083 at 4258.630 kb on - strand, within Psest_4083 at 4258.630 kb on - strand, within Psest_4083 at 4258.630 kb on - strand, within Psest_4083 at 4258.630 kb on - strand, within Psest_4083 at 4258.630 kb on - strand, within Psest_4083 at 4258.630 kb on - strand, within Psest_4083 at 4258.630 kb on - strand, within Psest_4083 at 4258.630 kb on - strand, within Psest_4083 at 4258.630 kb on - strand, within Psest_4083 at 4258.630 kb on - strand, within Psest_4083 at 4258.630 kb on - strand, within Psest_4083 at 4258.630 kb on - strand, within Psest_4083 at 4258.630 kb on - strand, within Psest_4083 at 4258.630 kb on - strand, within Psest_4083 at 4258.630 kb on - strand, within Psest_4083 at 4258.630 kb on - strand, within Psest_4083 at 4258.630 kb on - strand, within Psest_4083 at 4258.630 kb on - strand, within Psest_4083 at 4258.630 kb on - strand, within Psest_4083 at 4258.630 kb on - strand, within Psest_4083 at 4258.630 kb on - strand, within Psest_4083 at 4258.630 kb on - strand, within Psest_4083 at 4258.630 kb on - strand, within Psest_4083 at 4258.630 kb on - strand, within Psest_4083 at 4258.630 kb on - strand, within Psest_4083 at 4258.630 kb on - strand, within Psest_4083 at 4258.630 kb on - strand, within Psest_4083 at 4258.630 kb on - strand, within Psest_4083 at 4258.630 kb on - strand, within Psest_4083 at 4258.630 kb on - strand, within Psest_4083 at 4258.630 kb on - strand, within Psest_4083 at 4258.630 kb on - strand, within Psest_4083 at 4258.662 kb on + strand, within Psest_4083 at 4258.662 kb on + strand, within Psest_4083 at 4258.662 kb on + strand, within Psest_4083 at 4258.662 kb on + strand, within Psest_4083 at 4258.662 kb on + strand, within Psest_4083
Per-strain Table
Position Strand Gene LocusTag Fraction Def Benzethonium chloride 0.008 mM remove 4,255,859 + Psest_4079 0.80 -1.1 4,255,879 + Psest_4079 0.83 -0.1 4,255,879 + Psest_4079 0.83 +0.2 4,255,880 - Psest_4079 0.83 +0.4 4,255,880 - Psest_4079 0.83 +1.1 4,255,973 + +0.1 4,255,973 + +0.3 4,255,973 + +0.8 4,256,047 + +0.9 4,256,119 + Psest_4080 0.12 -0.5 4,256,119 + Psest_4080 0.12 -1.9 4,256,119 + Psest_4080 0.12 -2.8 4,256,120 - Psest_4080 0.12 +0.6 4,256,149 + Psest_4080 0.16 +1.0 4,256,149 + Psest_4080 0.16 -0.6 4,256,149 + Psest_4080 0.16 -1.4 4,256,150 - Psest_4080 0.17 -0.4 4,256,150 - Psest_4080 0.17 +0.3 4,256,582 + Psest_4080 0.78 -1.4 4,256,582 + Psest_4080 0.78 -0.4 4,256,648 - Psest_4080 0.88 -0.7 4,256,648 - Psest_4080 0.88 +0.1 4,256,750 - +0.2 4,256,968 + Psest_4081 0.22 -0.3 4,256,969 - Psest_4081 0.22 +0.4 4,257,124 + Psest_4081 0.39 -0.3 4,257,124 + Psest_4081 0.39 -3.0 4,257,124 + Psest_4081 0.39 +0.6 4,257,124 + Psest_4081 0.39 +0.8 4,257,125 - Psest_4081 0.39 -0.0 4,257,125 - Psest_4081 0.39 +0.2 4,257,125 - Psest_4081 0.39 +0.7 4,257,125 - Psest_4081 0.39 +0.3 4,257,181 + Psest_4081 0.45 -0.2 4,257,181 + Psest_4081 0.45 +0.1 4,257,181 + Psest_4081 0.45 -0.7 4,257,182 - Psest_4081 0.45 -0.3 4,257,215 - Psest_4081 0.49 -1.6 4,257,610 + +1.7 4,257,610 + +1.1 4,257,611 - -1.0 4,257,611 - +1.1 4,257,611 - +0.6 4,257,786 - Psest_4082 0.14 +2.4 4,257,786 - Psest_4082 0.14 +1.9 4,257,809 + Psest_4082 0.21 +2.0 4,257,809 + Psest_4082 0.21 +0.3 4,257,810 - Psest_4082 0.21 +2.0 4,257,812 + Psest_4082 0.22 +1.1 4,257,813 - Psest_4082 0.22 +0.8 4,258,090 - -0.7 4,258,206 + Psest_4083 0.17 -2.5 4,258,206 + Psest_4083 0.17 -0.3 4,258,206 + Psest_4083 0.17 -2.5 4,258,428 + Psest_4083 0.40 -4.3 4,258,429 - Psest_4083 0.40 -1.4 4,258,429 - Psest_4083 0.40 -1.2 4,258,627 + Psest_4083 0.61 -4.4 4,258,627 + Psest_4083 0.61 -1.9 4,258,627 + Psest_4083 0.61 -2.2 4,258,628 - Psest_4083 0.61 -0.9 4,258,628 - Psest_4083 0.61 -2.0 4,258,628 - Psest_4083 0.61 -2.8 4,258,628 - Psest_4083 0.61 -1.6 4,258,628 - Psest_4083 0.61 -1.0 4,258,628 - Psest_4083 0.61 -1.5 4,258,628 - Psest_4083 0.61 -1.0 4,258,629 + Psest_4083 0.62 -4.1 4,258,629 + Psest_4083 0.62 -1.4 4,258,629 + Psest_4083 0.62 -1.1 4,258,629 + Psest_4083 0.62 -3.0 4,258,629 + Psest_4083 0.62 -4.1 4,258,629 + Psest_4083 0.62 -2.9 4,258,629 + Psest_4083 0.62 -1.7 4,258,629 + Psest_4083 0.62 -3.7 4,258,629 + Psest_4083 0.62 -2.7 4,258,629 + Psest_4083 0.62 -2.1 4,258,629 + Psest_4083 0.62 -2.5 4,258,629 + Psest_4083 0.62 -2.6 4,258,629 + Psest_4083 0.62 -2.4 4,258,629 + Psest_4083 0.62 -3.3 4,258,629 + Psest_4083 0.62 -2.3 4,258,629 + Psest_4083 0.62 -2.9 4,258,629 + Psest_4083 0.62 -2.8 4,258,629 + Psest_4083 0.62 -2.1 4,258,629 + Psest_4083 0.62 -3.2 4,258,629 + Psest_4083 0.62 -2.0 4,258,629 + Psest_4083 0.62 -2.5 4,258,629 + Psest_4083 0.62 -1.4 4,258,629 + Psest_4083 0.62 -3.2 4,258,629 + Psest_4083 0.62 -4.0 4,258,629 + Psest_4083 0.62 -1.8 4,258,629 + Psest_4083 0.62 -2.6 4,258,629 + Psest_4083 0.62 -3.0 4,258,629 + Psest_4083 0.62 -3.9 4,258,629 + Psest_4083 0.62 -1.5 4,258,629 + Psest_4083 0.62 -3.2 4,258,629 + Psest_4083 0.62 -3.2 4,258,629 + Psest_4083 0.62 -0.9 4,258,629 + Psest_4083 0.62 -1.9 4,258,629 + Psest_4083 0.62 -3.2 4,258,629 + Psest_4083 0.62 -3.1 4,258,629 + Psest_4083 0.62 -2.5 4,258,629 + Psest_4083 0.62 -4.3 4,258,629 + Psest_4083 0.62 -2.2 4,258,629 + Psest_4083 0.62 -2.9 4,258,629 + Psest_4083 0.62 -3.3 4,258,629 + Psest_4083 0.62 -2.4 4,258,629 + Psest_4083 0.62 -3.7 4,258,629 + Psest_4083 0.62 -2.7 4,258,629 + Psest_4083 0.62 -1.5 4,258,630 - Psest_4083 0.62 -1.3 4,258,630 - Psest_4083 0.62 -2.2 4,258,630 - Psest_4083 0.62 -1.0 4,258,630 - Psest_4083 0.62 -0.6 4,258,630 - Psest_4083 0.62 -1.1 4,258,630 - Psest_4083 0.62 -0.4 4,258,630 - Psest_4083 0.62 -0.7 4,258,630 - Psest_4083 0.62 -1.4 4,258,630 - Psest_4083 0.62 -0.7 4,258,630 - Psest_4083 0.62 +0.8 4,258,630 - Psest_4083 0.62 -1.8 4,258,630 - Psest_4083 0.62 -3.1 4,258,630 - Psest_4083 0.62 -0.3 4,258,630 - Psest_4083 0.62 -0.9 4,258,630 - Psest_4083 0.62 +0.9 4,258,630 - Psest_4083 0.62 -0.5 4,258,630 - Psest_4083 0.62 +0.2 4,258,630 - Psest_4083 0.62 -0.5 4,258,630 - Psest_4083 0.62 -1.9 4,258,630 - Psest_4083 0.62 -0.9 4,258,630 - Psest_4083 0.62 -0.9 4,258,630 - Psest_4083 0.62 -0.1 4,258,630 - Psest_4083 0.62 -1.2 4,258,630 - Psest_4083 0.62 -1.3 4,258,630 - Psest_4083 0.62 -0.9 4,258,630 - Psest_4083 0.62 -3.5 4,258,630 - Psest_4083 0.62 -3.5 4,258,630 - Psest_4083 0.62 -0.6 4,258,630 - Psest_4083 0.62 -0.7 4,258,630 - Psest_4083 0.62 -0.3 4,258,630 - Psest_4083 0.62 -1.5 4,258,630 - Psest_4083 0.62 -1.6 4,258,630 - Psest_4083 0.62 -1.9 4,258,630 - Psest_4083 0.62 -0.6 4,258,630 - Psest_4083 0.62 -1.8 4,258,662 + Psest_4083 0.65 -2.1 4,258,662 + Psest_4083 0.65 -2.8 4,258,662 + Psest_4083 0.65 -2.5 4,258,662 + Psest_4083 0.65 -1.7 4,258,662 + Psest_4083 0.65 -2.5
Or see this region's nucleotide sequence