Experiment: Def Benzethonium chloride 0.008 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_3750 and Psest_3751 are separated by 207 nucleotides Psest_3751 and Psest_3752 are separated by 24 nucleotides Psest_3752 and Psest_3753 are separated by 21 nucleotides Psest_3753 and Psest_3754 are separated by 41 nucleotides
Psest_3750: Psest_3750 - Predicted signal transduction protein with a C-terminal ATPase domain, at 3,920,699 to 3,921,757
_3750
Psest_3751: Psest_3751 - argininosuccinate lyase, at 3,921,965 to 3,923,359
_3751
Psest_3752: Psest_3752 - hypothetical protein, at 3,923,384 to 3,923,626
_3752
Psest_3753: Psest_3753 - Acetyltransferases, at 3,923,648 to 3,924,127
_3753
Psest_3754: Psest_3754 - Uncharacterized protein involved in response to NO, at 3,924,169 to 3,925,317
_3754
Position (kb)
3921
3922
3923
3924 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3920.973 kb on + strand, within Psest_3750 at 3920.973 kb on + strand, within Psest_3750 at 3921.062 kb on + strand, within Psest_3750 at 3921.062 kb on + strand, within Psest_3750 at 3921.099 kb on + strand, within Psest_3750 at 3921.179 kb on + strand, within Psest_3750 at 3921.345 kb on - strand, within Psest_3750 at 3921.348 kb on + strand, within Psest_3750 at 3921.348 kb on + strand, within Psest_3750 at 3921.348 kb on + strand, within Psest_3750 at 3921.348 kb on + strand, within Psest_3750 at 3921.348 kb on + strand, within Psest_3750 at 3921.349 kb on - strand, within Psest_3750 at 3921.399 kb on + strand, within Psest_3750 at 3921.444 kb on + strand, within Psest_3750 at 3921.444 kb on + strand, within Psest_3750 at 3921.444 kb on + strand, within Psest_3750 at 3921.445 kb on - strand, within Psest_3750 at 3921.445 kb on - strand, within Psest_3750 at 3921.445 kb on - strand, within Psest_3750 at 3921.445 kb on - strand, within Psest_3750 at 3921.575 kb on + strand, within Psest_3750 at 3921.575 kb on + strand, within Psest_3750 at 3921.575 kb on + strand, within Psest_3750 at 3921.576 kb on - strand, within Psest_3750 at 3921.845 kb on + strand at 3921.918 kb on + strand at 3923.357 kb on + strand at 3923.450 kb on + strand, within Psest_3752 at 3923.459 kb on + strand, within Psest_3752 at 3923.459 kb on + strand, within Psest_3752 at 3923.460 kb on - strand, within Psest_3752 at 3923.465 kb on - strand, within Psest_3752 at 3923.548 kb on + strand, within Psest_3752 at 3923.548 kb on + strand, within Psest_3752 at 3923.549 kb on - strand, within Psest_3752 at 3923.549 kb on - strand, within Psest_3752 at 3923.549 kb on - strand, within Psest_3752 at 3923.618 kb on + strand at 3923.618 kb on + strand at 3923.618 kb on + strand at 3923.618 kb on + strand at 3923.618 kb on + strand at 3923.618 kb on + strand at 3923.618 kb on + strand at 3923.619 kb on - strand at 3923.619 kb on - strand at 3923.619 kb on - strand at 3923.619 kb on - strand at 3923.619 kb on - strand at 3923.723 kb on + strand, within Psest_3753 at 3923.724 kb on - strand, within Psest_3753 at 3923.724 kb on - strand, within Psest_3753 at 3923.724 kb on - strand, within Psest_3753 at 3923.849 kb on + strand, within Psest_3753 at 3923.849 kb on + strand, within Psest_3753 at 3923.861 kb on + strand, within Psest_3753 at 3923.861 kb on + strand, within Psest_3753 at 3923.891 kb on + strand, within Psest_3753 at 3923.906 kb on + strand, within Psest_3753 at 3923.906 kb on + strand, within Psest_3753 at 3923.906 kb on + strand, within Psest_3753 at 3924.041 kb on + strand, within Psest_3753 at 3924.041 kb on + strand, within Psest_3753 at 3924.041 kb on + strand, within Psest_3753 at 3924.042 kb on - strand, within Psest_3753 at 3924.042 kb on - strand, within Psest_3753 at 3924.232 kb on + strand at 3924.232 kb on + strand at 3924.232 kb on + strand at 3924.232 kb on + strand at 3924.233 kb on - strand at 3924.233 kb on - strand at 3924.233 kb on - strand at 3924.233 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Def Benzethonium chloride 0.008 mM remove 3,920,973 + Psest_3750 0.26 -1.6 3,920,973 + Psest_3750 0.26 -0.4 3,921,062 + Psest_3750 0.34 +0.1 3,921,062 + Psest_3750 0.34 -0.1 3,921,099 + Psest_3750 0.38 +1.2 3,921,179 + Psest_3750 0.45 -2.1 3,921,345 - Psest_3750 0.61 -2.1 3,921,348 + Psest_3750 0.61 +0.6 3,921,348 + Psest_3750 0.61 -2.4 3,921,348 + Psest_3750 0.61 -0.7 3,921,348 + Psest_3750 0.61 -0.9 3,921,348 + Psest_3750 0.61 -2.3 3,921,349 - Psest_3750 0.61 -0.1 3,921,399 + Psest_3750 0.66 +0.3 3,921,444 + Psest_3750 0.70 -1.3 3,921,444 + Psest_3750 0.70 -1.1 3,921,444 + Psest_3750 0.70 -0.4 3,921,445 - Psest_3750 0.70 -2.0 3,921,445 - Psest_3750 0.70 -0.8 3,921,445 - Psest_3750 0.70 -0.4 3,921,445 - Psest_3750 0.70 -2.3 3,921,575 + Psest_3750 0.83 -1.4 3,921,575 + Psest_3750 0.83 -0.9 3,921,575 + Psest_3750 0.83 -1.6 3,921,576 - Psest_3750 0.83 +0.4 3,921,845 + +0.4 3,921,918 + +1.0 3,923,357 + +1.9 3,923,450 + Psest_3752 0.27 -1.3 3,923,459 + Psest_3752 0.31 -1.1 3,923,459 + Psest_3752 0.31 -1.9 3,923,460 - Psest_3752 0.31 +0.1 3,923,465 - Psest_3752 0.33 -0.9 3,923,548 + Psest_3752 0.67 -0.6 3,923,548 + Psest_3752 0.67 +0.3 3,923,549 - Psest_3752 0.68 +0.2 3,923,549 - Psest_3752 0.68 -0.4 3,923,549 - Psest_3752 0.68 -0.3 3,923,618 + -0.3 3,923,618 + -0.2 3,923,618 + +1.1 3,923,618 + -2.7 3,923,618 + +0.0 3,923,618 + -0.2 3,923,618 + -1.2 3,923,619 - -1.2 3,923,619 - +0.3 3,923,619 - -1.1 3,923,619 - +0.8 3,923,619 - -1.4 3,923,723 + Psest_3753 0.16 -0.2 3,923,724 - Psest_3753 0.16 -0.4 3,923,724 - Psest_3753 0.16 +0.1 3,923,724 - Psest_3753 0.16 -1.5 3,923,849 + Psest_3753 0.42 -2.3 3,923,849 + Psest_3753 0.42 -0.2 3,923,861 + Psest_3753 0.44 +1.2 3,923,861 + Psest_3753 0.44 +0.6 3,923,891 + Psest_3753 0.51 -0.1 3,923,906 + Psest_3753 0.54 +0.0 3,923,906 + Psest_3753 0.54 -0.1 3,923,906 + Psest_3753 0.54 +1.0 3,924,041 + Psest_3753 0.82 -0.8 3,924,041 + Psest_3753 0.82 -0.9 3,924,041 + Psest_3753 0.82 -0.1 3,924,042 - Psest_3753 0.82 +0.5 3,924,042 - Psest_3753 0.82 -0.4 3,924,232 + -0.1 3,924,232 + -0.5 3,924,232 + +0.3 3,924,232 + -0.1 3,924,233 - +0.2 3,924,233 - +0.7 3,924,233 - -0.0 3,924,233 - +0.3
Or see this region's nucleotide sequence