Experiment: Def Benzethonium chloride 0.008 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_3329 and Psest_3330 are separated by 11 nucleotides Psest_3330 and Psest_3331 are separated by 137 nucleotides Psest_3331 and Psest_3332 are separated by 64 nucleotides
Psest_3329: Psest_3329 - aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit, at 3,494,011 to 3,495,462
_3329
Psest_3330: Psest_3330 - aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit, at 3,495,474 to 3,496,919
_3330
Psest_3331: Psest_3331 - rare lipoprotein A, at 3,497,057 to 3,497,458
_3331
Psest_3332: Psest_3332 - K+-dependent Na+/Ca+ exchanger related-protein, at 3,497,523 to 3,498,608
_3332
Position (kb)
3495
3496
3497 Strain fitness (log2 ratio)
-2
-1
0
1 at 3496.917 kb on + strand at 3496.918 kb on - strand at 3496.918 kb on - strand at 3497.004 kb on - strand at 3497.193 kb on - strand, within Psest_3331 at 3497.193 kb on - strand, within Psest_3331 at 3497.193 kb on - strand, within Psest_3331 at 3497.195 kb on + strand, within Psest_3331 at 3497.195 kb on + strand, within Psest_3331 at 3497.196 kb on - strand, within Psest_3331 at 3497.436 kb on + strand at 3497.437 kb on - strand at 3497.437 kb on - strand at 3497.440 kb on + strand at 3497.440 kb on + strand at 3497.441 kb on - strand at 3497.441 kb on - strand at 3497.508 kb on + strand at 3497.522 kb on + strand at 3497.522 kb on + strand at 3497.522 kb on + strand at 3497.522 kb on + strand at 3497.522 kb on + strand at 3497.522 kb on + strand at 3497.522 kb on + strand at 3497.522 kb on + strand at 3497.522 kb on + strand at 3497.522 kb on + strand at 3497.523 kb on - strand at 3497.523 kb on - strand at 3497.523 kb on - strand at 3497.523 kb on - strand at 3497.523 kb on - strand at 3497.523 kb on - strand at 3497.523 kb on - strand at 3497.593 kb on + strand at 3497.711 kb on - strand, within Psest_3332 at 3497.766 kb on - strand, within Psest_3332
Per-strain Table
Position Strand Gene LocusTag Fraction Def Benzethonium chloride 0.008 mM remove 3,496,917 + +0.9 3,496,918 - -0.8 3,496,918 - -0.8 3,497,004 - +0.9 3,497,193 - Psest_3331 0.34 +1.1 3,497,193 - Psest_3331 0.34 +1.0 3,497,193 - Psest_3331 0.34 +0.4 3,497,195 + Psest_3331 0.34 -1.1 3,497,195 + Psest_3331 0.34 -2.3 3,497,196 - Psest_3331 0.35 +1.3 3,497,436 + +0.6 3,497,437 - +0.0 3,497,437 - +0.9 3,497,440 + +0.5 3,497,440 + -1.8 3,497,441 - -0.2 3,497,441 - -1.2 3,497,508 + +0.4 3,497,522 + +1.0 3,497,522 + +1.1 3,497,522 + -0.3 3,497,522 + -0.1 3,497,522 + +0.9 3,497,522 + -0.0 3,497,522 + +0.8 3,497,522 + +0.9 3,497,522 + +0.7 3,497,522 + +0.8 3,497,523 - +0.3 3,497,523 - +0.4 3,497,523 - +0.8 3,497,523 - -0.4 3,497,523 - +0.2 3,497,523 - -0.5 3,497,523 - -1.0 3,497,593 + -0.2 3,497,711 - Psest_3332 0.17 +0.2 3,497,766 - Psest_3332 0.22 +0.2
Or see this region's nucleotide sequence