Experiment: Def Benzethonium chloride 0.008 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_3104 and Psest_3105 are separated by 109 nucleotides Psest_3105 and Psest_3106 are separated by 143 nucleotides Psest_3106 and Psest_3107 are separated by 34 nucleotides
Psest_3104: Psest_3104 - folate-binding protein YgfZ, at 3,281,792 to 3,282,739
_3104
Psest_3105: Psest_3105 - Predicted signal transduction protein, at 3,282,849 to 3,283,685
_3105
Psest_3106: Psest_3106 - Predicted outer membrane protein, at 3,283,829 to 3,284,344
_3106
Psest_3107: Psest_3107 - uracil-DNA glycosylase, at 3,284,379 to 3,285,074
_3107
Position (kb)
3282
3283
3284 Strain fitness (log2 ratio)
-2
-1
0
1 at 3282.781 kb on + strand at 3282.781 kb on + strand at 3282.782 kb on - strand at 3282.792 kb on + strand at 3282.837 kb on + strand at 3282.837 kb on + strand at 3282.837 kb on + strand at 3282.837 kb on + strand at 3282.837 kb on + strand at 3282.838 kb on - strand at 3282.838 kb on - strand at 3282.838 kb on - strand at 3282.838 kb on - strand at 3282.838 kb on - strand at 3282.838 kb on - strand at 3282.838 kb on - strand at 3282.838 kb on - strand at 3282.838 kb on - strand at 3283.116 kb on + strand, within Psest_3105 at 3283.116 kb on + strand, within Psest_3105 at 3283.116 kb on + strand, within Psest_3105 at 3283.117 kb on - strand, within Psest_3105 at 3283.117 kb on - strand, within Psest_3105 at 3283.117 kb on - strand, within Psest_3105 at 3283.117 kb on - strand, within Psest_3105 at 3283.117 kb on - strand, within Psest_3105 at 3283.117 kb on - strand, within Psest_3105 at 3283.117 kb on - strand, within Psest_3105 at 3283.201 kb on + strand, within Psest_3105 at 3283.202 kb on - strand, within Psest_3105 at 3283.254 kb on + strand, within Psest_3105 at 3283.329 kb on + strand, within Psest_3105 at 3283.330 kb on - strand, within Psest_3105 at 3283.467 kb on + strand, within Psest_3105 at 3283.467 kb on + strand, within Psest_3105 at 3283.468 kb on - strand, within Psest_3105 at 3283.468 kb on - strand, within Psest_3105 at 3283.503 kb on + strand, within Psest_3105 at 3283.531 kb on + strand, within Psest_3105 at 3283.539 kb on + strand, within Psest_3105 at 3283.539 kb on + strand, within Psest_3105 at 3283.540 kb on - strand, within Psest_3105 at 3283.540 kb on - strand, within Psest_3105 at 3283.540 kb on - strand, within Psest_3105 at 3283.540 kb on - strand, within Psest_3105 at 3283.540 kb on - strand, within Psest_3105 at 3283.540 kb on - strand, within Psest_3105 at 3283.540 kb on - strand, within Psest_3105 at 3283.540 kb on - strand, within Psest_3105 at 3283.540 kb on - strand, within Psest_3105 at 3283.540 kb on - strand, within Psest_3105 at 3283.683 kb on + strand at 3283.792 kb on - strand at 3283.919 kb on - strand, within Psest_3106 at 3284.039 kb on - strand, within Psest_3106 at 3284.067 kb on + strand, within Psest_3106 at 3284.171 kb on + strand, within Psest_3106 at 3284.172 kb on - strand, within Psest_3106 at 3284.172 kb on - strand, within Psest_3106 at 3284.216 kb on + strand, within Psest_3106 at 3284.217 kb on - strand, within Psest_3106 at 3284.225 kb on + strand, within Psest_3106 at 3284.225 kb on + strand, within Psest_3106 at 3284.225 kb on + strand, within Psest_3106 at 3284.225 kb on + strand, within Psest_3106 at 3284.226 kb on - strand, within Psest_3106 at 3284.226 kb on - strand, within Psest_3106 at 3284.502 kb on + strand, within Psest_3107 at 3284.503 kb on - strand, within Psest_3107 at 3284.503 kb on - strand, within Psest_3107 at 3284.572 kb on - strand, within Psest_3107 at 3284.682 kb on - strand, within Psest_3107
Per-strain Table
Position Strand Gene LocusTag Fraction Def Benzethonium chloride 0.008 mM remove 3,282,781 + +0.2 3,282,781 + -0.2 3,282,782 - +0.2 3,282,792 + -0.2 3,282,837 + +0.1 3,282,837 + -0.6 3,282,837 + -0.8 3,282,837 + -0.5 3,282,837 + -1.5 3,282,838 - -1.5 3,282,838 - -0.1 3,282,838 - +1.2 3,282,838 - -0.4 3,282,838 - -0.7 3,282,838 - -1.1 3,282,838 - -1.4 3,282,838 - -0.7 3,282,838 - -0.8 3,283,116 + Psest_3105 0.32 -0.6 3,283,116 + Psest_3105 0.32 -1.5 3,283,116 + Psest_3105 0.32 +0.3 3,283,117 - Psest_3105 0.32 -1.2 3,283,117 - Psest_3105 0.32 -1.4 3,283,117 - Psest_3105 0.32 -2.5 3,283,117 - Psest_3105 0.32 -2.6 3,283,117 - Psest_3105 0.32 -0.0 3,283,117 - Psest_3105 0.32 -1.2 3,283,117 - Psest_3105 0.32 -1.1 3,283,201 + Psest_3105 0.42 -1.5 3,283,202 - Psest_3105 0.42 -1.2 3,283,254 + Psest_3105 0.48 -0.8 3,283,329 + Psest_3105 0.57 -0.2 3,283,330 - Psest_3105 0.57 +0.9 3,283,467 + Psest_3105 0.74 -0.1 3,283,467 + Psest_3105 0.74 +0.5 3,283,468 - Psest_3105 0.74 -1.4 3,283,468 - Psest_3105 0.74 -1.7 3,283,503 + Psest_3105 0.78 -0.6 3,283,531 + Psest_3105 0.81 -1.3 3,283,539 + Psest_3105 0.82 -0.2 3,283,539 + Psest_3105 0.82 -0.5 3,283,540 - Psest_3105 0.83 -1.1 3,283,540 - Psest_3105 0.83 +0.3 3,283,540 - Psest_3105 0.83 +0.1 3,283,540 - Psest_3105 0.83 -0.2 3,283,540 - Psest_3105 0.83 -0.8 3,283,540 - Psest_3105 0.83 -1.0 3,283,540 - Psest_3105 0.83 -1.2 3,283,540 - Psest_3105 0.83 +0.2 3,283,540 - Psest_3105 0.83 -0.6 3,283,540 - Psest_3105 0.83 -1.0 3,283,683 + -1.6 3,283,792 - +0.5 3,283,919 - Psest_3106 0.17 +0.1 3,284,039 - Psest_3106 0.41 +0.5 3,284,067 + Psest_3106 0.46 -0.5 3,284,171 + Psest_3106 0.66 -1.4 3,284,172 - Psest_3106 0.66 -0.2 3,284,172 - Psest_3106 0.66 +0.8 3,284,216 + Psest_3106 0.75 +0.1 3,284,217 - Psest_3106 0.75 +0.4 3,284,225 + Psest_3106 0.77 -1.1 3,284,225 + Psest_3106 0.77 -0.4 3,284,225 + Psest_3106 0.77 -0.8 3,284,225 + Psest_3106 0.77 -1.5 3,284,226 - Psest_3106 0.77 +1.0 3,284,226 - Psest_3106 0.77 +0.8 3,284,502 + Psest_3107 0.18 +0.0 3,284,503 - Psest_3107 0.18 +0.4 3,284,503 - Psest_3107 0.18 +0.5 3,284,572 - Psest_3107 0.28 -0.0 3,284,682 - Psest_3107 0.44 +1.0
Or see this region's nucleotide sequence