Experiment: Def Benzethonium chloride 0.008 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2969 and Psest_2970 are separated by 34 nucleotides Psest_2970 and Psest_2971 are separated by 79 nucleotides Psest_2971 and Psest_2972 are separated by 113 nucleotides
Psest_2969: Psest_2969 - Methylase of chemotaxis methyl-accepting proteins, at 3,164,454 to 3,165,278
_2969
Psest_2970: Psest_2970 - Chemotaxis signal transduction protein, at 3,165,313 to 3,166,245
_2970
Psest_2971: Psest_2971 - flagella basal body P-ring formation protein FlgA, at 3,166,325 to 3,167,077
_2971
Psest_2972: Psest_2972 - flagellar biosynthesis anti-sigma factor FlgM, at 3,167,191 to 3,167,520
_2972
Position (kb)
3165
3166
3167 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3164.319 kb on + strand at 3164.338 kb on + strand at 3164.348 kb on - strand at 3164.467 kb on + strand at 3164.467 kb on + strand at 3164.467 kb on + strand at 3164.467 kb on + strand at 3164.467 kb on + strand at 3164.467 kb on + strand at 3164.468 kb on - strand at 3164.468 kb on - strand at 3164.468 kb on - strand at 3164.468 kb on - strand at 3164.468 kb on - strand at 3164.501 kb on - strand at 3164.614 kb on + strand, within Psest_2969 at 3164.614 kb on + strand, within Psest_2969 at 3164.614 kb on + strand, within Psest_2969 at 3164.615 kb on - strand, within Psest_2969 at 3164.615 kb on - strand, within Psest_2969 at 3164.615 kb on - strand, within Psest_2969 at 3164.615 kb on - strand, within Psest_2969 at 3164.665 kb on + strand, within Psest_2969 at 3164.666 kb on - strand, within Psest_2969 at 3164.666 kb on - strand, within Psest_2969 at 3164.666 kb on - strand, within Psest_2969 at 3164.666 kb on - strand, within Psest_2969 at 3164.756 kb on - strand, within Psest_2969 at 3164.903 kb on - strand, within Psest_2969 at 3164.930 kb on - strand, within Psest_2969 at 3165.196 kb on + strand at 3165.196 kb on + strand at 3165.196 kb on + strand at 3165.197 kb on - strand at 3165.197 kb on - strand at 3165.197 kb on - strand at 3165.197 kb on - strand at 3165.283 kb on - strand at 3165.444 kb on + strand, within Psest_2970 at 3165.444 kb on + strand, within Psest_2970 at 3165.444 kb on + strand, within Psest_2970 at 3165.444 kb on + strand, within Psest_2970 at 3165.444 kb on + strand, within Psest_2970 at 3165.444 kb on + strand, within Psest_2970 at 3165.444 kb on + strand, within Psest_2970 at 3165.444 kb on + strand, within Psest_2970 at 3165.445 kb on - strand, within Psest_2970 at 3165.445 kb on - strand, within Psest_2970 at 3165.445 kb on - strand, within Psest_2970 at 3165.445 kb on - strand, within Psest_2970 at 3165.445 kb on - strand, within Psest_2970 at 3165.445 kb on - strand, within Psest_2970 at 3165.445 kb on - strand, within Psest_2970 at 3165.445 kb on - strand, within Psest_2970 at 3165.445 kb on - strand, within Psest_2970 at 3165.445 kb on - strand, within Psest_2970 at 3165.445 kb on - strand, within Psest_2970 at 3165.454 kb on + strand, within Psest_2970 at 3165.454 kb on + strand, within Psest_2970 at 3165.454 kb on + strand, within Psest_2970 at 3165.454 kb on + strand, within Psest_2970 at 3165.454 kb on + strand, within Psest_2970 at 3165.454 kb on + strand, within Psest_2970 at 3165.454 kb on + strand, within Psest_2970 at 3165.454 kb on + strand, within Psest_2970 at 3165.455 kb on - strand, within Psest_2970 at 3165.455 kb on - strand, within Psest_2970 at 3165.455 kb on - strand, within Psest_2970 at 3165.455 kb on - strand, within Psest_2970 at 3165.455 kb on - strand, within Psest_2970 at 3165.455 kb on - strand, within Psest_2970 at 3165.455 kb on - strand, within Psest_2970 at 3165.455 kb on - strand, within Psest_2970 at 3165.455 kb on - strand, within Psest_2970 at 3165.455 kb on - strand, within Psest_2970 at 3165.455 kb on - strand, within Psest_2970 at 3165.455 kb on - strand, within Psest_2970 at 3165.455 kb on - strand, within Psest_2970 at 3165.455 kb on - strand, within Psest_2970 at 3165.455 kb on - strand, within Psest_2970 at 3165.455 kb on - strand, within Psest_2970 at 3165.455 kb on - strand, within Psest_2970 at 3165.456 kb on + strand, within Psest_2970 at 3165.456 kb on + strand, within Psest_2970 at 3165.456 kb on + strand, within Psest_2970 at 3165.456 kb on + strand, within Psest_2970 at 3165.456 kb on + strand, within Psest_2970 at 3165.456 kb on + strand, within Psest_2970 at 3165.456 kb on + strand, within Psest_2970 at 3165.456 kb on + strand, within Psest_2970 at 3165.457 kb on - strand, within Psest_2970 at 3165.457 kb on - strand, within Psest_2970 at 3165.457 kb on - strand, within Psest_2970 at 3165.457 kb on - strand, within Psest_2970 at 3165.457 kb on - strand, within Psest_2970 at 3165.457 kb on - strand, within Psest_2970 at 3165.457 kb on - strand, within Psest_2970 at 3165.457 kb on - strand, within Psest_2970 at 3165.457 kb on - strand, within Psest_2970 at 3165.506 kb on + strand, within Psest_2970 at 3165.507 kb on - strand, within Psest_2970 at 3165.507 kb on - strand, within Psest_2970 at 3165.507 kb on - strand, within Psest_2970 at 3165.532 kb on - strand, within Psest_2970 at 3165.597 kb on - strand, within Psest_2970 at 3165.643 kb on + strand, within Psest_2970 at 3165.644 kb on - strand, within Psest_2970 at 3165.645 kb on + strand, within Psest_2970 at 3165.646 kb on - strand, within Psest_2970 at 3165.646 kb on - strand, within Psest_2970 at 3165.646 kb on - strand, within Psest_2970 at 3165.646 kb on - strand, within Psest_2970 at 3165.851 kb on + strand, within Psest_2970 at 3165.956 kb on + strand, within Psest_2970 at 3165.956 kb on + strand, within Psest_2970 at 3165.956 kb on + strand, within Psest_2970 at 3165.957 kb on - strand, within Psest_2970 at 3165.957 kb on - strand, within Psest_2970 at 3165.957 kb on - strand, within Psest_2970 at 3165.957 kb on - strand, within Psest_2970 at 3165.957 kb on - strand, within Psest_2970 at 3166.041 kb on + strand, within Psest_2970 at 3166.042 kb on - strand, within Psest_2970 at 3166.042 kb on - strand, within Psest_2970 at 3166.042 kb on - strand, within Psest_2970 at 3166.042 kb on - strand, within Psest_2970 at 3166.135 kb on + strand, within Psest_2970 at 3166.135 kb on + strand, within Psest_2970 at 3166.136 kb on - strand, within Psest_2970 at 3166.148 kb on + strand, within Psest_2970 at 3166.234 kb on + strand at 3166.235 kb on - strand at 3166.272 kb on - strand at 3166.272 kb on - strand at 3166.272 kb on - strand at 3166.272 kb on - strand at 3166.289 kb on + strand at 3166.292 kb on + strand at 3166.293 kb on - strand at 3166.336 kb on + strand at 3166.336 kb on + strand at 3166.337 kb on - strand at 3166.337 kb on - strand at 3166.450 kb on + strand, within Psest_2971 at 3166.485 kb on + strand, within Psest_2971 at 3166.494 kb on - strand, within Psest_2971 at 3166.494 kb on - strand, within Psest_2971 at 3166.494 kb on - strand, within Psest_2971 at 3166.494 kb on - strand, within Psest_2971 at 3166.497 kb on + strand, within Psest_2971 at 3166.497 kb on + strand, within Psest_2971 at 3166.497 kb on + strand, within Psest_2971 at 3166.498 kb on - strand, within Psest_2971 at 3166.498 kb on - strand, within Psest_2971 at 3166.498 kb on - strand, within Psest_2971 at 3166.498 kb on - strand, within Psest_2971 at 3166.726 kb on - strand, within Psest_2971 at 3166.821 kb on + strand, within Psest_2971 at 3166.821 kb on + strand, within Psest_2971 at 3166.822 kb on - strand, within Psest_2971 at 3166.822 kb on - strand, within Psest_2971 at 3166.899 kb on + strand, within Psest_2971 at 3167.029 kb on - strand at 3167.075 kb on + strand at 3167.075 kb on + strand at 3167.075 kb on + strand at 3167.075 kb on + strand at 3167.075 kb on + strand at 3167.076 kb on - strand at 3167.076 kb on - strand at 3167.076 kb on - strand at 3167.076 kb on - strand at 3167.076 kb on - strand at 3167.076 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Def Benzethonium chloride 0.008 mM remove 3,164,319 + -0.2 3,164,338 + -0.9 3,164,348 - +0.1 3,164,467 + -1.0 3,164,467 + -0.4 3,164,467 + +0.2 3,164,467 + -1.1 3,164,467 + -0.9 3,164,467 + -0.9 3,164,468 - -0.7 3,164,468 - -0.3 3,164,468 - -1.6 3,164,468 - -0.4 3,164,468 - -0.6 3,164,501 - -1.6 3,164,614 + Psest_2969 0.19 -0.5 3,164,614 + Psest_2969 0.19 -1.0 3,164,614 + Psest_2969 0.19 -0.1 3,164,615 - Psest_2969 0.20 +0.5 3,164,615 - Psest_2969 0.20 +1.1 3,164,615 - Psest_2969 0.20 +0.3 3,164,615 - Psest_2969 0.20 +0.8 3,164,665 + Psest_2969 0.26 -1.1 3,164,666 - Psest_2969 0.26 -0.1 3,164,666 - Psest_2969 0.26 +0.1 3,164,666 - Psest_2969 0.26 -0.4 3,164,666 - Psest_2969 0.26 -0.8 3,164,756 - Psest_2969 0.37 -3.2 3,164,903 - Psest_2969 0.54 -1.2 3,164,930 - Psest_2969 0.58 -0.7 3,165,196 + -2.2 3,165,196 + +0.0 3,165,196 + -1.8 3,165,197 - +0.9 3,165,197 - -3.0 3,165,197 - -0.6 3,165,197 - -0.0 3,165,283 - +0.5 3,165,444 + Psest_2970 0.14 -1.1 3,165,444 + Psest_2970 0.14 -2.2 3,165,444 + Psest_2970 0.14 +0.0 3,165,444 + Psest_2970 0.14 +0.6 3,165,444 + Psest_2970 0.14 -1.0 3,165,444 + Psest_2970 0.14 -0.4 3,165,444 + Psest_2970 0.14 -1.3 3,165,444 + Psest_2970 0.14 -1.0 3,165,445 - Psest_2970 0.14 +0.9 3,165,445 - Psest_2970 0.14 +0.6 3,165,445 - Psest_2970 0.14 +0.6 3,165,445 - Psest_2970 0.14 +0.5 3,165,445 - Psest_2970 0.14 -2.0 3,165,445 - Psest_2970 0.14 -2.6 3,165,445 - Psest_2970 0.14 +0.3 3,165,445 - Psest_2970 0.14 +0.9 3,165,445 - Psest_2970 0.14 +0.7 3,165,445 - Psest_2970 0.14 +0.7 3,165,445 - Psest_2970 0.14 -0.8 3,165,454 + Psest_2970 0.15 -2.3 3,165,454 + Psest_2970 0.15 +0.5 3,165,454 + Psest_2970 0.15 -1.3 3,165,454 + Psest_2970 0.15 -0.4 3,165,454 + Psest_2970 0.15 +0.4 3,165,454 + Psest_2970 0.15 -1.4 3,165,454 + Psest_2970 0.15 -2.6 3,165,454 + Psest_2970 0.15 -2.1 3,165,455 - Psest_2970 0.15 +0.2 3,165,455 - Psest_2970 0.15 -0.6 3,165,455 - Psest_2970 0.15 +0.3 3,165,455 - Psest_2970 0.15 +1.2 3,165,455 - Psest_2970 0.15 +0.0 3,165,455 - Psest_2970 0.15 -0.1 3,165,455 - Psest_2970 0.15 +0.5 3,165,455 - Psest_2970 0.15 +1.3 3,165,455 - Psest_2970 0.15 +0.6 3,165,455 - Psest_2970 0.15 +0.2 3,165,455 - Psest_2970 0.15 +0.0 3,165,455 - Psest_2970 0.15 +0.2 3,165,455 - Psest_2970 0.15 +0.5 3,165,455 - Psest_2970 0.15 -0.9 3,165,455 - Psest_2970 0.15 +0.8 3,165,455 - Psest_2970 0.15 +0.4 3,165,455 - Psest_2970 0.15 +0.8 3,165,456 + Psest_2970 0.15 -1.4 3,165,456 + Psest_2970 0.15 -0.3 3,165,456 + Psest_2970 0.15 -2.3 3,165,456 + Psest_2970 0.15 -0.4 3,165,456 + Psest_2970 0.15 -1.3 3,165,456 + Psest_2970 0.15 -1.7 3,165,456 + Psest_2970 0.15 -0.0 3,165,456 + Psest_2970 0.15 -0.9 3,165,457 - Psest_2970 0.15 +0.4 3,165,457 - Psest_2970 0.15 +0.5 3,165,457 - Psest_2970 0.15 +0.2 3,165,457 - Psest_2970 0.15 +0.6 3,165,457 - Psest_2970 0.15 -0.6 3,165,457 - Psest_2970 0.15 +0.7 3,165,457 - Psest_2970 0.15 +1.0 3,165,457 - Psest_2970 0.15 +1.0 3,165,457 - Psest_2970 0.15 +1.7 3,165,506 + Psest_2970 0.21 -1.8 3,165,507 - Psest_2970 0.21 +0.5 3,165,507 - Psest_2970 0.21 +1.3 3,165,507 - Psest_2970 0.21 +0.7 3,165,532 - Psest_2970 0.23 +0.1 3,165,597 - Psest_2970 0.30 +0.4 3,165,643 + Psest_2970 0.35 -0.6 3,165,644 - Psest_2970 0.35 -1.3 3,165,645 + Psest_2970 0.36 -1.3 3,165,646 - Psest_2970 0.36 -0.1 3,165,646 - Psest_2970 0.36 +1.4 3,165,646 - Psest_2970 0.36 +0.2 3,165,646 - Psest_2970 0.36 +0.1 3,165,851 + Psest_2970 0.58 -1.6 3,165,956 + Psest_2970 0.69 -0.4 3,165,956 + Psest_2970 0.69 -1.3 3,165,956 + Psest_2970 0.69 -0.7 3,165,957 - Psest_2970 0.69 -0.4 3,165,957 - Psest_2970 0.69 +0.1 3,165,957 - Psest_2970 0.69 -0.7 3,165,957 - Psest_2970 0.69 -0.1 3,165,957 - Psest_2970 0.69 -0.1 3,166,041 + Psest_2970 0.78 -0.3 3,166,042 - Psest_2970 0.78 -0.0 3,166,042 - Psest_2970 0.78 +0.3 3,166,042 - Psest_2970 0.78 +0.5 3,166,042 - Psest_2970 0.78 +0.5 3,166,135 + Psest_2970 0.88 -3.0 3,166,135 + Psest_2970 0.88 -1.1 3,166,136 - Psest_2970 0.88 -0.7 3,166,148 + Psest_2970 0.89 -1.1 3,166,234 + -0.5 3,166,235 - -0.2 3,166,272 - -0.1 3,166,272 - +0.7 3,166,272 - +0.6 3,166,272 - -0.2 3,166,289 + -1.4 3,166,292 + -1.2 3,166,293 - -0.0 3,166,336 + +0.2 3,166,336 + -0.2 3,166,337 - +0.7 3,166,337 - -1.4 3,166,450 + Psest_2971 0.17 +2.0 3,166,485 + Psest_2971 0.21 +0.5 3,166,494 - Psest_2971 0.22 +2.8 3,166,494 - Psest_2971 0.22 +0.1 3,166,494 - Psest_2971 0.22 +0.1 3,166,494 - Psest_2971 0.22 -1.0 3,166,497 + Psest_2971 0.23 -0.2 3,166,497 + Psest_2971 0.23 -0.5 3,166,497 + Psest_2971 0.23 +0.4 3,166,498 - Psest_2971 0.23 +0.1 3,166,498 - Psest_2971 0.23 +1.4 3,166,498 - Psest_2971 0.23 -0.1 3,166,498 - Psest_2971 0.23 +0.3 3,166,726 - Psest_2971 0.53 +0.1 3,166,821 + Psest_2971 0.66 -0.5 3,166,821 + Psest_2971 0.66 -0.5 3,166,822 - Psest_2971 0.66 -0.7 3,166,822 - Psest_2971 0.66 +0.4 3,166,899 + Psest_2971 0.76 +0.2 3,167,029 - +0.6 3,167,075 + -0.0 3,167,075 + +0.7 3,167,075 + -0.0 3,167,075 + +0.1 3,167,075 + -0.2 3,167,076 - -1.3 3,167,076 - -0.1 3,167,076 - +0.2 3,167,076 - -1.5 3,167,076 - +0.1 3,167,076 - +0.8
Or see this region's nucleotide sequence