Experiment: Def Benzethonium chloride 0.008 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2811 and Psest_2812 overlap by 4 nucleotides Psest_2812 and Psest_2813 are separated by 184 nucleotides Psest_2813 and Psest_2814 are separated by 38 nucleotides Psest_2814 and Psest_2815 are separated by 172 nucleotides
Psest_2811: Psest_2811 - Uncharacterized conserved protein, at 2,999,855 to 3,000,895
_2811
Psest_2812: Psest_2812 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, at 3,000,892 to 3,001,365
_2812
Psest_2813: Psest_2813 - Predicted transcriptional regulators, at 3,001,550 to 3,001,852
_2813
Psest_2814: Psest_2814 - NADH:flavin oxidoreductases, Old Yellow Enzyme family, at 3,001,891 to 3,002,940
_2814
Psest_2815: Psest_2815 - S-formylglutathione hydrolase, at 3,003,113 to 3,003,958
_2815
Position (kb)
3001
3002
3003 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3001.366 kb on - strand at 3001.366 kb on - strand at 3001.366 kb on - strand at 3001.366 kb on - strand at 3001.366 kb on - strand at 3001.366 kb on - strand at 3001.366 kb on - strand at 3001.366 kb on - strand at 3001.366 kb on - strand at 3001.366 kb on - strand at 3001.366 kb on - strand at 3001.366 kb on - strand at 3001.366 kb on - strand at 3001.366 kb on - strand at 3001.403 kb on + strand at 3001.403 kb on + strand at 3001.404 kb on - strand at 3001.509 kb on - strand at 3001.511 kb on - strand at 3001.530 kb on + strand at 3001.530 kb on + strand at 3001.531 kb on - strand at 3001.531 kb on - strand at 3001.637 kb on + strand, within Psest_2813 at 3001.674 kb on + strand, within Psest_2813 at 3001.674 kb on + strand, within Psest_2813 at 3001.674 kb on + strand, within Psest_2813 at 3001.674 kb on + strand, within Psest_2813 at 3001.674 kb on + strand, within Psest_2813 at 3001.674 kb on + strand, within Psest_2813 at 3001.674 kb on + strand, within Psest_2813 at 3001.674 kb on + strand, within Psest_2813 at 3001.674 kb on + strand, within Psest_2813 at 3001.674 kb on + strand, within Psest_2813 at 3001.675 kb on - strand, within Psest_2813 at 3001.675 kb on - strand, within Psest_2813 at 3001.675 kb on - strand, within Psest_2813 at 3001.675 kb on - strand, within Psest_2813 at 3001.675 kb on - strand, within Psest_2813 at 3001.675 kb on - strand, within Psest_2813 at 3001.675 kb on - strand, within Psest_2813 at 3001.675 kb on - strand, within Psest_2813 at 3001.675 kb on - strand, within Psest_2813 at 3001.675 kb on - strand, within Psest_2813 at 3001.675 kb on - strand, within Psest_2813 at 3001.675 kb on - strand, within Psest_2813 at 3001.675 kb on - strand, within Psest_2813 at 3001.890 kb on + strand at 3002.014 kb on + strand, within Psest_2814 at 3002.014 kb on + strand, within Psest_2814 at 3002.015 kb on - strand, within Psest_2814 at 3002.015 kb on - strand, within Psest_2814 at 3002.018 kb on - strand, within Psest_2814 at 3002.018 kb on - strand, within Psest_2814 at 3002.103 kb on + strand, within Psest_2814 at 3002.104 kb on - strand, within Psest_2814 at 3002.105 kb on + strand, within Psest_2814 at 3002.105 kb on + strand, within Psest_2814 at 3002.106 kb on - strand, within Psest_2814 at 3002.106 kb on - strand, within Psest_2814 at 3002.106 kb on - strand, within Psest_2814 at 3002.180 kb on + strand, within Psest_2814 at 3002.195 kb on + strand, within Psest_2814 at 3002.195 kb on + strand, within Psest_2814 at 3002.195 kb on + strand, within Psest_2814 at 3002.195 kb on + strand, within Psest_2814 at 3002.195 kb on + strand, within Psest_2814 at 3002.196 kb on - strand, within Psest_2814 at 3002.218 kb on + strand, within Psest_2814 at 3002.218 kb on + strand, within Psest_2814 at 3002.219 kb on - strand, within Psest_2814 at 3002.219 kb on - strand, within Psest_2814 at 3002.219 kb on - strand, within Psest_2814 at 3002.219 kb on - strand, within Psest_2814 at 3002.300 kb on - strand, within Psest_2814 at 3002.353 kb on + strand, within Psest_2814 at 3002.422 kb on + strand, within Psest_2814 at 3002.561 kb on + strand, within Psest_2814 at 3002.626 kb on + strand, within Psest_2814 at 3002.627 kb on - strand, within Psest_2814 at 3002.665 kb on - strand, within Psest_2814 at 3002.734 kb on + strand, within Psest_2814 at 3002.734 kb on + strand, within Psest_2814 at 3002.734 kb on + strand, within Psest_2814 at 3002.734 kb on + strand, within Psest_2814 at 3002.734 kb on + strand, within Psest_2814 at 3002.734 kb on + strand, within Psest_2814 at 3002.735 kb on - strand, within Psest_2814 at 3002.735 kb on - strand, within Psest_2814 at 3002.735 kb on - strand, within Psest_2814 at 3002.822 kb on - strand, within Psest_2814 at 3002.896 kb on + strand at 3002.896 kb on + strand at 3002.896 kb on + strand at 3002.896 kb on + strand at 3002.938 kb on + strand at 3002.938 kb on + strand at 3002.939 kb on - strand at 3003.001 kb on + strand at 3003.001 kb on + strand at 3003.001 kb on + strand at 3003.001 kb on + strand at 3003.002 kb on - strand at 3003.002 kb on - strand at 3003.157 kb on + strand at 3003.174 kb on + strand at 3003.174 kb on + strand at 3003.174 kb on + strand at 3003.174 kb on + strand at 3003.174 kb on + strand at 3003.175 kb on - strand at 3003.177 kb on + strand at 3003.177 kb on + strand at 3003.177 kb on + strand at 3003.177 kb on + strand at 3003.177 kb on + strand at 3003.177 kb on + strand at 3003.177 kb on + strand at 3003.177 kb on + strand at 3003.177 kb on + strand at 3003.177 kb on + strand at 3003.177 kb on + strand at 3003.178 kb on - strand at 3003.178 kb on - strand at 3003.178 kb on - strand at 3003.178 kb on - strand at 3003.178 kb on - strand at 3003.178 kb on - strand at 3003.178 kb on - strand at 3003.178 kb on - strand at 3003.385 kb on - strand, within Psest_2815 at 3003.455 kb on + strand, within Psest_2815 at 3003.455 kb on + strand, within Psest_2815 at 3003.456 kb on - strand, within Psest_2815 at 3003.456 kb on - strand, within Psest_2815 at 3003.456 kb on - strand, within Psest_2815 at 3003.585 kb on + strand, within Psest_2815 at 3003.585 kb on + strand, within Psest_2815 at 3003.591 kb on + strand, within Psest_2815 at 3003.591 kb on + strand, within Psest_2815 at 3003.591 kb on + strand, within Psest_2815 at 3003.591 kb on + strand, within Psest_2815 at 3003.592 kb on - strand, within Psest_2815 at 3003.592 kb on - strand, within Psest_2815 at 3003.636 kb on + strand, within Psest_2815 at 3003.637 kb on - strand, within Psest_2815 at 3003.810 kb on + strand, within Psest_2815 at 3003.811 kb on - strand, within Psest_2815 at 3003.811 kb on - strand, within Psest_2815 at 3003.866 kb on + strand, within Psest_2815 at 3003.866 kb on + strand, within Psest_2815 at 3003.866 kb on + strand, within Psest_2815 at 3003.866 kb on + strand, within Psest_2815 at 3003.866 kb on + strand, within Psest_2815 at 3003.866 kb on + strand, within Psest_2815
Per-strain Table
Position Strand Gene LocusTag Fraction Def Benzethonium chloride 0.008 mM remove 3,001,366 - -0.1 3,001,366 - -0.5 3,001,366 - -0.9 3,001,366 - -2.2 3,001,366 - -1.4 3,001,366 - -0.7 3,001,366 - -2.2 3,001,366 - -1.6 3,001,366 - -0.4 3,001,366 - -1.2 3,001,366 - -2.3 3,001,366 - -3.1 3,001,366 - -1.1 3,001,366 - -1.8 3,001,403 + +0.2 3,001,403 + -0.8 3,001,404 - -1.1 3,001,509 - -0.2 3,001,511 - -0.1 3,001,530 + +0.3 3,001,530 + -0.5 3,001,531 - +0.9 3,001,531 - +0.0 3,001,637 + Psest_2813 0.29 +1.3 3,001,674 + Psest_2813 0.41 +1.0 3,001,674 + Psest_2813 0.41 +0.4 3,001,674 + Psest_2813 0.41 -1.7 3,001,674 + Psest_2813 0.41 +0.9 3,001,674 + Psest_2813 0.41 +0.1 3,001,674 + Psest_2813 0.41 +0.9 3,001,674 + Psest_2813 0.41 -1.0 3,001,674 + Psest_2813 0.41 +1.0 3,001,674 + Psest_2813 0.41 +1.0 3,001,674 + Psest_2813 0.41 +1.1 3,001,675 - Psest_2813 0.41 -0.7 3,001,675 - Psest_2813 0.41 +0.2 3,001,675 - Psest_2813 0.41 +1.0 3,001,675 - Psest_2813 0.41 -1.1 3,001,675 - Psest_2813 0.41 -0.0 3,001,675 - Psest_2813 0.41 -0.8 3,001,675 - Psest_2813 0.41 -0.0 3,001,675 - Psest_2813 0.41 -0.8 3,001,675 - Psest_2813 0.41 -0.3 3,001,675 - Psest_2813 0.41 +0.5 3,001,675 - Psest_2813 0.41 +0.5 3,001,675 - Psest_2813 0.41 +1.8 3,001,675 - Psest_2813 0.41 +0.6 3,001,890 + -0.5 3,002,014 + Psest_2814 0.12 +0.5 3,002,014 + Psest_2814 0.12 -0.3 3,002,015 - Psest_2814 0.12 +0.3 3,002,015 - Psest_2814 0.12 +0.6 3,002,018 - Psest_2814 0.12 -0.7 3,002,018 - Psest_2814 0.12 -0.1 3,002,103 + Psest_2814 0.20 +1.7 3,002,104 - Psest_2814 0.20 +0.5 3,002,105 + Psest_2814 0.20 +0.6 3,002,105 + Psest_2814 0.20 +0.2 3,002,106 - Psest_2814 0.20 -0.6 3,002,106 - Psest_2814 0.20 +0.9 3,002,106 - Psest_2814 0.20 +0.5 3,002,180 + Psest_2814 0.28 +0.5 3,002,195 + Psest_2814 0.29 +0.4 3,002,195 + Psest_2814 0.29 +0.8 3,002,195 + Psest_2814 0.29 -0.9 3,002,195 + Psest_2814 0.29 +1.6 3,002,195 + Psest_2814 0.29 +0.9 3,002,196 - Psest_2814 0.29 -1.0 3,002,218 + Psest_2814 0.31 +0.7 3,002,218 + Psest_2814 0.31 +0.8 3,002,219 - Psest_2814 0.31 +0.7 3,002,219 - Psest_2814 0.31 +0.6 3,002,219 - Psest_2814 0.31 +1.4 3,002,219 - Psest_2814 0.31 +0.9 3,002,300 - Psest_2814 0.39 +0.4 3,002,353 + Psest_2814 0.44 +1.1 3,002,422 + Psest_2814 0.51 +1.3 3,002,561 + Psest_2814 0.64 +1.2 3,002,626 + Psest_2814 0.70 +1.6 3,002,627 - Psest_2814 0.70 -0.7 3,002,665 - Psest_2814 0.74 +0.1 3,002,734 + Psest_2814 0.80 +1.0 3,002,734 + Psest_2814 0.80 +1.8 3,002,734 + Psest_2814 0.80 +2.6 3,002,734 + Psest_2814 0.80 +2.0 3,002,734 + Psest_2814 0.80 +1.9 3,002,734 + Psest_2814 0.80 +1.5 3,002,735 - Psest_2814 0.80 -0.8 3,002,735 - Psest_2814 0.80 +0.3 3,002,735 - Psest_2814 0.80 -0.9 3,002,822 - Psest_2814 0.89 +0.0 3,002,896 + +1.6 3,002,896 + +0.9 3,002,896 + +0.0 3,002,896 + +2.6 3,002,938 + +0.9 3,002,938 + +1.6 3,002,939 - +0.6 3,003,001 + +1.4 3,003,001 + +0.8 3,003,001 + -0.3 3,003,001 + +0.2 3,003,002 - +1.9 3,003,002 - +1.6 3,003,157 + +0.6 3,003,174 + +0.0 3,003,174 + -1.1 3,003,174 + +1.9 3,003,174 + +0.4 3,003,174 + +0.1 3,003,175 - +1.1 3,003,177 + -0.2 3,003,177 + -0.4 3,003,177 + +0.7 3,003,177 + +0.5 3,003,177 + -2.0 3,003,177 + -0.0 3,003,177 + +0.2 3,003,177 + +1.2 3,003,177 + +0.9 3,003,177 + -0.5 3,003,177 + -0.1 3,003,178 - +1.2 3,003,178 - +1.2 3,003,178 - +1.0 3,003,178 - +1.5 3,003,178 - +1.6 3,003,178 - +1.1 3,003,178 - +0.9 3,003,178 - +0.9 3,003,385 - Psest_2815 0.32 +0.6 3,003,455 + Psest_2815 0.40 -0.7 3,003,455 + Psest_2815 0.40 -0.7 3,003,456 - Psest_2815 0.41 +0.9 3,003,456 - Psest_2815 0.41 +1.1 3,003,456 - Psest_2815 0.41 -0.4 3,003,585 + Psest_2815 0.56 -0.6 3,003,585 + Psest_2815 0.56 +0.3 3,003,591 + Psest_2815 0.57 +0.4 3,003,591 + Psest_2815 0.57 +0.0 3,003,591 + Psest_2815 0.57 +0.6 3,003,591 + Psest_2815 0.57 -1.0 3,003,592 - Psest_2815 0.57 +0.7 3,003,592 - Psest_2815 0.57 +0.4 3,003,636 + Psest_2815 0.62 +0.3 3,003,637 - Psest_2815 0.62 +0.3 3,003,810 + Psest_2815 0.82 +0.1 3,003,811 - Psest_2815 0.83 +0.9 3,003,811 - Psest_2815 0.83 +0.2 3,003,866 + Psest_2815 0.89 +0.0 3,003,866 + Psest_2815 0.89 +0.3 3,003,866 + Psest_2815 0.89 -0.8 3,003,866 + Psest_2815 0.89 +0.4 3,003,866 + Psest_2815 0.89 -0.7 3,003,866 + Psest_2815 0.89 -0.1
Or see this region's nucleotide sequence