Experiment: Def Benzethonium chloride 0.008 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2716 and Psest_2717 are separated by 85 nucleotides Psest_2717 and Psest_2718 are separated by 12 nucleotides Psest_2718 and Psest_2719 are separated by 55 nucleotides
Psest_2716: Psest_2716 - ABC-type multidrug transport system, ATPase component, at 2,905,367 to 2,906,296
_2716
Psest_2717: Psest_2717 - Succinylglutamate desuccinylase, at 2,906,382 to 2,907,380
_2717
Psest_2718: Psest_2718 - hypothetical protein, at 2,907,393 to 2,907,674
_2718
Psest_2719: Psest_2719 - acetylornithine and succinylornithine aminotransferases/succinylornithine transaminase family, at 2,907,730 to 2,908,950
_2719
Position (kb)
2906
2907
2908 Strain fitness (log2 ratio)
-1
0
1 at 2905.509 kb on - strand, within Psest_2716 at 2905.555 kb on + strand, within Psest_2716 at 2905.556 kb on - strand, within Psest_2716 at 2906.256 kb on + strand at 2906.256 kb on + strand at 2906.256 kb on + strand at 2906.256 kb on + strand at 2906.257 kb on - strand at 2906.257 kb on - strand at 2906.257 kb on - strand at 2906.257 kb on - strand at 2906.257 kb on - strand at 2906.257 kb on - strand at 2906.291 kb on - strand at 2906.296 kb on + strand at 2906.330 kb on + strand at 2906.330 kb on + strand at 2906.330 kb on + strand at 2906.331 kb on - strand at 2906.331 kb on - strand at 2906.335 kb on - strand at 2906.420 kb on + strand at 2906.421 kb on - strand at 2906.421 kb on - strand at 2906.938 kb on + strand, within Psest_2717 at 2906.939 kb on - strand, within Psest_2717 at 2907.024 kb on + strand, within Psest_2717 at 2907.024 kb on + strand, within Psest_2717 at 2907.024 kb on + strand, within Psest_2717 at 2907.025 kb on - strand, within Psest_2717 at 2907.025 kb on - strand, within Psest_2717 at 2907.025 kb on - strand, within Psest_2717 at 2907.183 kb on + strand, within Psest_2717 at 2907.183 kb on + strand, within Psest_2717 at 2907.183 kb on + strand, within Psest_2717 at 2907.183 kb on + strand, within Psest_2717 at 2907.183 kb on + strand, within Psest_2717 at 2907.183 kb on + strand, within Psest_2717 at 2907.183 kb on + strand, within Psest_2717 at 2907.183 kb on + strand, within Psest_2717 at 2907.183 kb on + strand, within Psest_2717 at 2907.184 kb on - strand, within Psest_2717 at 2907.184 kb on - strand, within Psest_2717 at 2907.184 kb on - strand, within Psest_2717 at 2907.184 kb on - strand, within Psest_2717 at 2907.184 kb on - strand, within Psest_2717 at 2907.184 kb on - strand, within Psest_2717 at 2907.184 kb on - strand, within Psest_2717 at 2907.184 kb on - strand, within Psest_2717 at 2907.508 kb on + strand, within Psest_2718 at 2907.535 kb on - strand, within Psest_2718 at 2907.577 kb on - strand, within Psest_2718 at 2907.676 kb on + strand at 2907.676 kb on + strand at 2907.676 kb on + strand at 2907.677 kb on - strand at 2907.677 kb on - strand at 2907.965 kb on + strand, within Psest_2719 at 2908.230 kb on - strand, within Psest_2719 at 2908.329 kb on - strand, within Psest_2719
Per-strain Table
Position Strand Gene LocusTag Fraction Def Benzethonium chloride 0.008 mM remove 2,905,509 - Psest_2716 0.15 -0.1 2,905,555 + Psest_2716 0.20 -0.5 2,905,556 - Psest_2716 0.20 +0.8 2,906,256 + -0.2 2,906,256 + -0.0 2,906,256 + +0.3 2,906,256 + +0.0 2,906,257 - -0.3 2,906,257 - -0.2 2,906,257 - +0.7 2,906,257 - +0.2 2,906,257 - -0.1 2,906,257 - -0.4 2,906,291 - -0.5 2,906,296 + +0.3 2,906,330 + -0.9 2,906,330 + -0.5 2,906,330 + -0.6 2,906,331 - -0.7 2,906,331 - -0.7 2,906,335 - -0.2 2,906,420 + -0.6 2,906,421 - +0.2 2,906,421 - -0.2 2,906,938 + Psest_2717 0.56 +0.4 2,906,939 - Psest_2717 0.56 +0.7 2,907,024 + Psest_2717 0.64 +0.4 2,907,024 + Psest_2717 0.64 -1.3 2,907,024 + Psest_2717 0.64 +0.6 2,907,025 - Psest_2717 0.64 +0.4 2,907,025 - Psest_2717 0.64 +1.3 2,907,025 - Psest_2717 0.64 +0.2 2,907,183 + Psest_2717 0.80 +0.4 2,907,183 + Psest_2717 0.80 +1.1 2,907,183 + Psest_2717 0.80 +0.4 2,907,183 + Psest_2717 0.80 +1.1 2,907,183 + Psest_2717 0.80 +0.3 2,907,183 + Psest_2717 0.80 -1.1 2,907,183 + Psest_2717 0.80 +0.2 2,907,183 + Psest_2717 0.80 -0.1 2,907,183 + Psest_2717 0.80 +0.1 2,907,184 - Psest_2717 0.80 +0.6 2,907,184 - Psest_2717 0.80 +0.8 2,907,184 - Psest_2717 0.80 -0.1 2,907,184 - Psest_2717 0.80 +0.5 2,907,184 - Psest_2717 0.80 +0.0 2,907,184 - Psest_2717 0.80 -0.2 2,907,184 - Psest_2717 0.80 +0.8 2,907,184 - Psest_2717 0.80 +0.4 2,907,508 + Psest_2718 0.41 -0.0 2,907,535 - Psest_2718 0.50 +1.6 2,907,577 - Psest_2718 0.65 +1.0 2,907,676 + -0.2 2,907,676 + -0.8 2,907,676 + +0.0 2,907,677 - +0.8 2,907,677 - -0.3 2,907,965 + Psest_2719 0.19 +1.5 2,908,230 - Psest_2719 0.41 +0.4 2,908,329 - Psest_2719 0.49 +0.4
Or see this region's nucleotide sequence