Experiment: Def Benzethonium chloride 0.008 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2253 and Psest_2254 are separated by 112 nucleotides Psest_2254 and Psest_2255 are separated by 0 nucleotides Psest_2255 and Psest_2256 are separated by 152 nucleotides Psest_2256 and Psest_2257 are separated by 46 nucleotides Psest_2257 and Psest_2258 are separated by 69 nucleotides Psest_2258 and Psest_2259 overlap by 23 nucleotides
Psest_2253: Psest_2253 - small redox-active disulfide protein 2, at 2,402,918 to 2,403,148
_2253
Psest_2254: Psest_2254 - hypothetical protein, at 2,403,261 to 2,403,455
_2254
Psest_2255: Psest_2255 - hypothetical protein, at 2,403,456 to 2,403,701
_2255
Psest_2256: Psest_2256 - tRNA_Cys_GCA, at 2,403,854 to 2,403,927
_2256
Psest_2257: Psest_2257 - tRNA_Gly_GCC, at 2,403,974 to 2,404,049
_2257
Psest_2258: Psest_2258 - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, at 2,404,119 to 2,404,733
_2258
Psest_2259: Psest_2259 - excinuclease ABC, C subunit, at 2,404,711 to 2,406,534
_2259
Position (kb)
2404
2405 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2403.218 kb on - strand at 2403.218 kb on - strand at 2403.218 kb on - strand at 2403.218 kb on - strand at 2403.232 kb on + strand at 2403.232 kb on + strand at 2403.232 kb on + strand at 2403.232 kb on + strand at 2403.232 kb on + strand at 2403.232 kb on + strand at 2403.232 kb on + strand at 2403.232 kb on + strand at 2403.232 kb on + strand at 2403.232 kb on + strand at 2403.232 kb on + strand at 2403.233 kb on - strand at 2403.233 kb on - strand at 2403.233 kb on - strand at 2403.234 kb on + strand at 2403.234 kb on + strand at 2403.234 kb on + strand at 2403.234 kb on + strand at 2403.234 kb on + strand at 2403.234 kb on + strand at 2403.234 kb on + strand at 2403.234 kb on + strand at 2403.234 kb on + strand at 2403.234 kb on + strand at 2403.234 kb on + strand at 2403.234 kb on + strand at 2403.235 kb on - strand at 2403.235 kb on - strand at 2403.235 kb on - strand at 2403.235 kb on - strand at 2403.235 kb on - strand at 2403.244 kb on + strand at 2403.279 kb on + strand at 2403.279 kb on + strand at 2403.279 kb on + strand at 2403.279 kb on + strand at 2403.279 kb on + strand at 2403.279 kb on + strand at 2403.279 kb on + strand at 2403.279 kb on + strand at 2403.280 kb on - strand at 2403.280 kb on - strand at 2403.280 kb on - strand at 2403.478 kb on + strand at 2403.478 kb on + strand at 2403.479 kb on - strand at 2403.479 kb on - strand at 2403.479 kb on - strand at 2403.735 kb on + strand at 2403.735 kb on + strand at 2403.735 kb on + strand at 2403.735 kb on + strand at 2403.736 kb on - strand at 2403.736 kb on - strand at 2403.736 kb on - strand at 2403.736 kb on - strand at 2403.736 kb on - strand at 2403.736 kb on - strand at 2403.737 kb on + strand at 2403.737 kb on + strand at 2403.737 kb on + strand at 2403.737 kb on + strand at 2403.737 kb on + strand at 2403.737 kb on + strand at 2403.737 kb on + strand at 2403.737 kb on + strand at 2403.737 kb on + strand at 2403.737 kb on + strand at 2403.738 kb on - strand at 2403.738 kb on - strand at 2403.738 kb on - strand at 2403.738 kb on - strand at 2403.738 kb on - strand at 2403.738 kb on - strand at 2403.738 kb on - strand at 2403.738 kb on - strand at 2403.738 kb on - strand at 2403.738 kb on - strand at 2403.738 kb on - strand at 2404.734 kb on - strand at 2404.798 kb on - strand at 2405.222 kb on + strand, within Psest_2259 at 2405.222 kb on + strand, within Psest_2259 at 2405.223 kb on - strand, within Psest_2259 at 2405.544 kb on + strand, within Psest_2259 at 2405.627 kb on + strand, within Psest_2259 at 2405.628 kb on - strand, within Psest_2259 at 2405.628 kb on - strand, within Psest_2259 at 2405.630 kb on + strand, within Psest_2259 at 2405.630 kb on + strand, within Psest_2259 at 2405.650 kb on + strand, within Psest_2259
Per-strain Table
Position Strand Gene LocusTag Fraction Def Benzethonium chloride 0.008 mM remove 2,403,218 - -0.5 2,403,218 - +0.1 2,403,218 - -0.1 2,403,218 - -0.3 2,403,232 + -0.6 2,403,232 + +0.1 2,403,232 + -0.9 2,403,232 + +0.6 2,403,232 + -0.2 2,403,232 + -0.6 2,403,232 + -0.6 2,403,232 + -0.2 2,403,232 + +0.6 2,403,232 + -0.3 2,403,232 + +0.8 2,403,233 - -0.9 2,403,233 - +0.4 2,403,233 - -0.8 2,403,234 + -0.7 2,403,234 + +0.5 2,403,234 + -0.3 2,403,234 + +1.5 2,403,234 + -0.3 2,403,234 + -0.2 2,403,234 + -0.4 2,403,234 + -0.4 2,403,234 + -0.3 2,403,234 + -0.3 2,403,234 + +0.0 2,403,234 + +0.2 2,403,235 - -0.3 2,403,235 - -0.2 2,403,235 - -0.6 2,403,235 - +0.9 2,403,235 - -0.5 2,403,244 + -0.4 2,403,279 + +0.3 2,403,279 + +0.3 2,403,279 + -1.2 2,403,279 + -0.0 2,403,279 + +1.9 2,403,279 + -0.2 2,403,279 + +0.1 2,403,279 + +0.1 2,403,280 - -0.7 2,403,280 - +0.9 2,403,280 - +0.3 2,403,478 + +0.1 2,403,478 + -1.7 2,403,479 - -1.5 2,403,479 - -0.3 2,403,479 - +0.3 2,403,735 + -0.3 2,403,735 + -0.1 2,403,735 + -0.3 2,403,735 + +1.1 2,403,736 - -1.6 2,403,736 - +0.2 2,403,736 - -1.5 2,403,736 - -0.5 2,403,736 - +0.5 2,403,736 - -0.2 2,403,737 + -0.4 2,403,737 + +0.0 2,403,737 + -0.2 2,403,737 + -0.4 2,403,737 + +1.3 2,403,737 + -0.1 2,403,737 + -0.6 2,403,737 + -0.4 2,403,737 + -0.3 2,403,737 + +0.7 2,403,738 - +0.0 2,403,738 - -0.4 2,403,738 - -0.1 2,403,738 - -0.5 2,403,738 - +0.5 2,403,738 - -2.7 2,403,738 - -1.1 2,403,738 - -0.5 2,403,738 - -0.7 2,403,738 - +0.2 2,403,738 - -1.5 2,404,734 - -0.9 2,404,798 - -1.4 2,405,222 + Psest_2259 0.28 -0.1 2,405,222 + Psest_2259 0.28 +0.5 2,405,223 - Psest_2259 0.28 -0.9 2,405,544 + Psest_2259 0.46 -1.4 2,405,627 + Psest_2259 0.50 -0.7 2,405,628 - Psest_2259 0.50 -1.7 2,405,628 - Psest_2259 0.50 +0.2 2,405,630 + Psest_2259 0.50 -1.9 2,405,630 + Psest_2259 0.50 -0.8 2,405,650 + Psest_2259 0.51 -0.5
Or see this region's nucleotide sequence