Experiment: Def Benzethonium chloride 0.008 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_1806 and Psest_1807 are separated by 259 nucleotides Psest_1807 and Psest_1808 are separated by 131 nucleotides
Psest_1806: Psest_1806 - Chain length determinant protein, at 1,903,818 to 1,905,098
_1806
Psest_1807: Psest_1807 - Chain length determinant protein, at 1,905,358 to 1,906,638
_1807
Psest_1808: Psest_1808 - Predicted metal-dependent RNase, consists of a metallo-beta-lactamase domain and an RNA-binding KH domain, at 1,906,770 to 1,908,323
_1808
Position (kb)
1905
1906
1907 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1904.421 kb on + strand, within Psest_1806 at 1904.421 kb on + strand, within Psest_1806 at 1904.421 kb on + strand, within Psest_1806 at 1904.421 kb on + strand, within Psest_1806 at 1904.594 kb on + strand, within Psest_1806 at 1904.595 kb on - strand, within Psest_1806 at 1904.662 kb on + strand, within Psest_1806 at 1904.662 kb on + strand, within Psest_1806 at 1904.797 kb on + strand, within Psest_1806 at 1904.848 kb on + strand, within Psest_1806 at 1904.848 kb on + strand, within Psest_1806 at 1904.848 kb on + strand, within Psest_1806 at 1904.848 kb on + strand, within Psest_1806 at 1904.848 kb on + strand, within Psest_1806 at 1904.848 kb on + strand, within Psest_1806 at 1904.848 kb on + strand, within Psest_1806 at 1904.848 kb on + strand, within Psest_1806 at 1904.848 kb on + strand, within Psest_1806 at 1904.848 kb on + strand, within Psest_1806 at 1904.849 kb on - strand, within Psest_1806 at 1904.849 kb on - strand, within Psest_1806 at 1904.849 kb on - strand, within Psest_1806 at 1904.849 kb on - strand, within Psest_1806 at 1904.849 kb on - strand, within Psest_1806 at 1904.849 kb on - strand, within Psest_1806 at 1904.849 kb on - strand, within Psest_1806 at 1904.849 kb on - strand, within Psest_1806 at 1904.849 kb on - strand, within Psest_1806 at 1904.849 kb on - strand, within Psest_1806 at 1904.849 kb on - strand, within Psest_1806 at 1904.850 kb on + strand, within Psest_1806 at 1904.850 kb on + strand, within Psest_1806 at 1904.850 kb on + strand, within Psest_1806 at 1904.851 kb on - strand, within Psest_1806 at 1905.032 kb on - strand at 1905.047 kb on - strand at 1905.096 kb on + strand at 1905.097 kb on - strand at 1905.141 kb on + strand at 1905.141 kb on + strand at 1905.141 kb on + strand at 1905.141 kb on + strand at 1905.141 kb on + strand at 1905.141 kb on + strand at 1905.142 kb on - strand at 1905.142 kb on - strand at 1905.142 kb on - strand at 1905.142 kb on - strand at 1905.142 kb on - strand at 1905.142 kb on - strand at 1905.162 kb on + strand at 1905.196 kb on - strand at 1905.217 kb on + strand at 1905.217 kb on + strand at 1905.218 kb on - strand at 1905.467 kb on + strand at 1905.468 kb on - strand at 1905.468 kb on - strand at 1905.500 kb on - strand, within Psest_1807 at 1905.520 kb on + strand, within Psest_1807 at 1905.521 kb on - strand, within Psest_1807 at 1905.523 kb on + strand, within Psest_1807 at 1905.523 kb on + strand, within Psest_1807 at 1905.523 kb on + strand, within Psest_1807 at 1905.523 kb on + strand, within Psest_1807 at 1905.524 kb on - strand, within Psest_1807 at 1905.524 kb on - strand, within Psest_1807 at 1905.542 kb on + strand, within Psest_1807 at 1905.543 kb on - strand, within Psest_1807 at 1905.588 kb on + strand, within Psest_1807 at 1905.588 kb on + strand, within Psest_1807 at 1905.588 kb on + strand, within Psest_1807 at 1905.589 kb on - strand, within Psest_1807 at 1905.589 kb on - strand, within Psest_1807 at 1905.593 kb on - strand, within Psest_1807 at 1905.593 kb on - strand, within Psest_1807 at 1905.593 kb on - strand, within Psest_1807 at 1905.593 kb on - strand, within Psest_1807 at 1905.593 kb on - strand, within Psest_1807 at 1905.698 kb on + strand, within Psest_1807 at 1905.803 kb on - strand, within Psest_1807 at 1905.803 kb on - strand, within Psest_1807 at 1905.803 kb on - strand, within Psest_1807 at 1905.823 kb on + strand, within Psest_1807 at 1905.916 kb on - strand, within Psest_1807 at 1905.936 kb on + strand, within Psest_1807 at 1905.976 kb on + strand, within Psest_1807 at 1905.977 kb on - strand, within Psest_1807 at 1905.977 kb on - strand, within Psest_1807 at 1905.977 kb on - strand, within Psest_1807 at 1905.977 kb on - strand, within Psest_1807 at 1906.206 kb on - strand, within Psest_1807 at 1906.243 kb on + strand, within Psest_1807 at 1906.243 kb on + strand, within Psest_1807 at 1906.244 kb on - strand, within Psest_1807 at 1906.382 kb on + strand, within Psest_1807 at 1906.412 kb on + strand, within Psest_1807 at 1906.413 kb on - strand, within Psest_1807 at 1906.413 kb on - strand, within Psest_1807 at 1906.547 kb on + strand at 1906.547 kb on + strand at 1906.548 kb on - strand at 1906.692 kb on + strand at 1906.834 kb on + strand at 1906.834 kb on + strand at 1906.834 kb on + strand at 1906.835 kb on - strand at 1906.835 kb on - strand at 1906.835 kb on - strand at 1906.835 kb on - strand at 1906.916 kb on + strand at 1907.007 kb on + strand, within Psest_1808 at 1907.007 kb on + strand, within Psest_1808 at 1907.040 kb on + strand, within Psest_1808 at 1907.041 kb on - strand, within Psest_1808 at 1907.041 kb on - strand, within Psest_1808 at 1907.041 kb on - strand, within Psest_1808 at 1907.065 kb on + strand, within Psest_1808 at 1907.065 kb on + strand, within Psest_1808 at 1907.066 kb on - strand, within Psest_1808 at 1907.066 kb on - strand, within Psest_1808 at 1907.066 kb on - strand, within Psest_1808 at 1907.072 kb on + strand, within Psest_1808 at 1907.098 kb on + strand, within Psest_1808 at 1907.098 kb on + strand, within Psest_1808 at 1907.099 kb on - strand, within Psest_1808 at 1907.172 kb on + strand, within Psest_1808 at 1907.173 kb on - strand, within Psest_1808 at 1907.243 kb on + strand, within Psest_1808 at 1907.244 kb on - strand, within Psest_1808 at 1907.259 kb on + strand, within Psest_1808 at 1907.260 kb on - strand, within Psest_1808 at 1907.492 kb on - strand, within Psest_1808 at 1907.536 kb on - strand, within Psest_1808 at 1907.576 kb on + strand, within Psest_1808 at 1907.623 kb on + strand, within Psest_1808 at 1907.623 kb on + strand, within Psest_1808 at 1907.624 kb on - strand, within Psest_1808 at 1907.624 kb on - strand, within Psest_1808 at 1907.624 kb on - strand, within Psest_1808
Per-strain Table
Position Strand Gene LocusTag Fraction Def Benzethonium chloride 0.008 mM remove 1,904,421 + Psest_1806 0.47 -0.0 1,904,421 + Psest_1806 0.47 -0.2 1,904,421 + Psest_1806 0.47 -0.0 1,904,421 + Psest_1806 0.47 -0.2 1,904,594 + Psest_1806 0.61 +1.0 1,904,595 - Psest_1806 0.61 -0.2 1,904,662 + Psest_1806 0.66 +0.1 1,904,662 + Psest_1806 0.66 -0.3 1,904,797 + Psest_1806 0.76 +0.9 1,904,848 + Psest_1806 0.80 -0.6 1,904,848 + Psest_1806 0.80 +0.7 1,904,848 + Psest_1806 0.80 +1.3 1,904,848 + Psest_1806 0.80 +2.0 1,904,848 + Psest_1806 0.80 +0.9 1,904,848 + Psest_1806 0.80 +0.6 1,904,848 + Psest_1806 0.80 +1.0 1,904,848 + Psest_1806 0.80 +1.2 1,904,848 + Psest_1806 0.80 +0.4 1,904,848 + Psest_1806 0.80 +0.0 1,904,849 - Psest_1806 0.80 -0.1 1,904,849 - Psest_1806 0.80 -1.5 1,904,849 - Psest_1806 0.80 -2.8 1,904,849 - Psest_1806 0.80 -0.8 1,904,849 - Psest_1806 0.80 +1.1 1,904,849 - Psest_1806 0.80 -0.8 1,904,849 - Psest_1806 0.80 -1.0 1,904,849 - Psest_1806 0.80 -0.0 1,904,849 - Psest_1806 0.80 +1.4 1,904,849 - Psest_1806 0.80 -1.1 1,904,849 - Psest_1806 0.80 -1.2 1,904,850 + Psest_1806 0.81 +1.2 1,904,850 + Psest_1806 0.81 -1.1 1,904,850 + Psest_1806 0.81 +0.9 1,904,851 - Psest_1806 0.81 +0.3 1,905,032 - +0.1 1,905,047 - +0.4 1,905,096 + +1.4 1,905,097 - -0.5 1,905,141 + -0.7 1,905,141 + -0.1 1,905,141 + -1.5 1,905,141 + -0.1 1,905,141 + +0.3 1,905,141 + -0.9 1,905,142 - +1.3 1,905,142 - -0.2 1,905,142 - -0.1 1,905,142 - -0.7 1,905,142 - +1.6 1,905,142 - +0.3 1,905,162 + +0.4 1,905,196 - +2.2 1,905,217 + -0.3 1,905,217 + +0.8 1,905,218 - +1.9 1,905,467 + -0.5 1,905,468 - -0.4 1,905,468 - +0.1 1,905,500 - Psest_1807 0.11 -0.2 1,905,520 + Psest_1807 0.13 -0.4 1,905,521 - Psest_1807 0.13 +0.3 1,905,523 + Psest_1807 0.13 +0.0 1,905,523 + Psest_1807 0.13 +0.3 1,905,523 + Psest_1807 0.13 -0.3 1,905,523 + Psest_1807 0.13 +0.1 1,905,524 - Psest_1807 0.13 +0.2 1,905,524 - Psest_1807 0.13 +0.1 1,905,542 + Psest_1807 0.14 +1.1 1,905,543 - Psest_1807 0.14 +0.0 1,905,588 + Psest_1807 0.18 -0.4 1,905,588 + Psest_1807 0.18 +0.8 1,905,588 + Psest_1807 0.18 -0.1 1,905,589 - Psest_1807 0.18 -0.9 1,905,589 - Psest_1807 0.18 -1.7 1,905,593 - Psest_1807 0.18 +0.7 1,905,593 - Psest_1807 0.18 -0.2 1,905,593 - Psest_1807 0.18 +0.5 1,905,593 - Psest_1807 0.18 -0.4 1,905,593 - Psest_1807 0.18 +1.2 1,905,698 + Psest_1807 0.27 -0.3 1,905,803 - Psest_1807 0.35 -1.0 1,905,803 - Psest_1807 0.35 -0.1 1,905,803 - Psest_1807 0.35 -0.5 1,905,823 + Psest_1807 0.36 +0.1 1,905,916 - Psest_1807 0.44 -0.7 1,905,936 + Psest_1807 0.45 +0.0 1,905,976 + Psest_1807 0.48 +0.1 1,905,977 - Psest_1807 0.48 +0.0 1,905,977 - Psest_1807 0.48 +0.8 1,905,977 - Psest_1807 0.48 -1.6 1,905,977 - Psest_1807 0.48 -1.1 1,906,206 - Psest_1807 0.66 -0.4 1,906,243 + Psest_1807 0.69 +0.2 1,906,243 + Psest_1807 0.69 +0.9 1,906,244 - Psest_1807 0.69 +1.1 1,906,382 + Psest_1807 0.80 +1.2 1,906,412 + Psest_1807 0.82 -0.2 1,906,413 - Psest_1807 0.82 -0.7 1,906,413 - Psest_1807 0.82 +0.1 1,906,547 + +1.5 1,906,547 + +0.1 1,906,548 - -0.8 1,906,692 + +0.5 1,906,834 + -0.5 1,906,834 + +0.1 1,906,834 + +0.4 1,906,835 - -0.4 1,906,835 - +1.8 1,906,835 - -0.4 1,906,835 - -0.2 1,906,916 + -0.0 1,907,007 + Psest_1808 0.15 -0.8 1,907,007 + Psest_1808 0.15 +0.6 1,907,040 + Psest_1808 0.17 +0.4 1,907,041 - Psest_1808 0.17 -0.1 1,907,041 - Psest_1808 0.17 -0.7 1,907,041 - Psest_1808 0.17 -0.8 1,907,065 + Psest_1808 0.19 -0.1 1,907,065 + Psest_1808 0.19 -0.0 1,907,066 - Psest_1808 0.19 -0.2 1,907,066 - Psest_1808 0.19 -0.4 1,907,066 - Psest_1808 0.19 -1.6 1,907,072 + Psest_1808 0.19 +0.9 1,907,098 + Psest_1808 0.21 +1.0 1,907,098 + Psest_1808 0.21 +2.1 1,907,099 - Psest_1808 0.21 +0.9 1,907,172 + Psest_1808 0.26 -0.3 1,907,173 - Psest_1808 0.26 +2.9 1,907,243 + Psest_1808 0.30 -0.5 1,907,244 - Psest_1808 0.31 +0.5 1,907,259 + Psest_1808 0.31 -0.4 1,907,260 - Psest_1808 0.32 +1.4 1,907,492 - Psest_1808 0.46 +0.9 1,907,536 - Psest_1808 0.49 +1.2 1,907,576 + Psest_1808 0.52 +0.7 1,907,623 + Psest_1808 0.55 +1.3 1,907,623 + Psest_1808 0.55 +0.4 1,907,624 - Psest_1808 0.55 -0.2 1,907,624 - Psest_1808 0.55 +0.8 1,907,624 - Psest_1808 0.55 -0.6
Or see this region's nucleotide sequence