Experiment: Def Benzethonium chloride 0.008 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_0161 and Psest_0162 are separated by 114 nucleotides Psest_0162 and Psest_0163 are separated by 140 nucleotides Psest_0163 and Psest_0164 are separated by 2 nucleotides Psest_0164 and Psest_0165 are separated by 64 nucleotides
Psest_0161: Psest_0161 - Membrane-bound metallopeptidase, at 159,242 to 160,504
_0161
Psest_0162: Psest_0162 - 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, at 160,619 to 162,166
_0162
Psest_0163: Psest_0163 - Rhodanese-related sulfurtransferase, at 162,307 to 162,720
_0163
Psest_0164: Psest_0164 - Glutaredoxin, GrxC family, at 162,723 to 162,977
_0164
Psest_0165: Psest_0165 - protein-export chaperone SecB, at 163,042 to 163,536
_0165
Position (kb)
160
161
162
163 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 160.086 kb on + strand, within Psest_0161 at 160.527 kb on - strand at 160.537 kb on + strand at 160.538 kb on - strand at 160.538 kb on - strand at 160.538 kb on - strand at 160.538 kb on - strand at 160.538 kb on - strand at 160.538 kb on - strand at 160.538 kb on - strand at 160.538 kb on - strand at 160.538 kb on - strand at 160.538 kb on - strand at 160.538 kb on - strand at 160.538 kb on - strand at 160.538 kb on - strand at 160.538 kb on - strand at 160.538 kb on - strand at 160.538 kb on - strand at 160.541 kb on - strand at 160.541 kb on - strand at 160.541 kb on - strand at 160.541 kb on - strand at 160.541 kb on - strand at 160.541 kb on - strand at 160.541 kb on - strand at 160.541 kb on - strand at 160.541 kb on - strand at 160.547 kb on - strand at 162.270 kb on + strand at 162.270 kb on + strand at 162.270 kb on + strand at 162.270 kb on + strand at 162.270 kb on + strand at 162.270 kb on + strand at 162.270 kb on + strand at 162.271 kb on - strand at 162.271 kb on - strand at 162.271 kb on - strand at 162.271 kb on - strand at 162.272 kb on + strand at 162.272 kb on + strand at 162.272 kb on + strand at 162.288 kb on - strand at 162.343 kb on + strand at 162.344 kb on - strand at 162.347 kb on + strand at 162.347 kb on + strand at 162.347 kb on + strand at 162.347 kb on + strand at 162.347 kb on + strand at 162.347 kb on + strand at 162.347 kb on + strand at 162.347 kb on + strand at 162.347 kb on + strand at 162.347 kb on + strand at 162.347 kb on + strand at 162.347 kb on + strand at 162.347 kb on + strand at 162.348 kb on - strand at 162.348 kb on - strand at 162.718 kb on + strand at 162.718 kb on + strand at 162.718 kb on + strand at 162.718 kb on + strand at 162.718 kb on + strand at 162.718 kb on + strand at 162.718 kb on + strand at 162.718 kb on + strand at 162.741 kb on + strand at 162.741 kb on + strand at 162.741 kb on + strand at 162.741 kb on + strand at 162.741 kb on + strand at 162.741 kb on + strand at 162.741 kb on + strand at 162.741 kb on + strand at 162.741 kb on + strand at 162.741 kb on + strand at 162.741 kb on + strand at 162.741 kb on + strand at 162.741 kb on + strand at 162.741 kb on + strand at 162.741 kb on + strand at 162.741 kb on + strand at 162.741 kb on + strand at 162.741 kb on + strand at 162.741 kb on + strand at 162.741 kb on + strand at 162.741 kb on + strand at 162.742 kb on - strand at 162.742 kb on - strand at 162.742 kb on - strand at 162.742 kb on - strand at 162.742 kb on - strand at 162.742 kb on - strand at 162.742 kb on - strand at 162.743 kb on + strand at 162.743 kb on + strand at 162.807 kb on + strand, within Psest_0164 at 163.028 kb on - strand at 163.028 kb on - strand at 163.056 kb on + strand at 163.057 kb on - strand at 163.117 kb on + strand, within Psest_0165 at 163.118 kb on - strand, within Psest_0165 at 163.118 kb on - strand, within Psest_0165
Per-strain Table
Position Strand Gene LocusTag Fraction Def Benzethonium chloride 0.008 mM remove 160,086 + Psest_0161 0.67 -2.8 160,527 - -1.9 160,537 + +0.6 160,538 - -1.6 160,538 - -1.1 160,538 - +0.7 160,538 - +0.3 160,538 - -1.1 160,538 - +0.5 160,538 - -1.1 160,538 - +0.2 160,538 - -1.4 160,538 - -0.0 160,538 - -1.2 160,538 - -1.0 160,538 - -1.6 160,538 - -1.7 160,538 - -1.0 160,538 - -1.7 160,541 - -1.1 160,541 - -0.7 160,541 - +0.5 160,541 - -1.4 160,541 - -0.4 160,541 - -0.6 160,541 - +0.4 160,541 - -0.6 160,541 - -2.0 160,547 - -1.6 162,270 + -2.3 162,270 + -1.0 162,270 + -2.0 162,270 + +0.1 162,270 + -2.0 162,270 + +0.4 162,270 + -1.0 162,271 - +0.1 162,271 - +1.2 162,271 - +0.0 162,271 - +1.0 162,272 + -0.3 162,272 + -0.5 162,272 + -0.7 162,288 - +1.2 162,343 + -0.4 162,344 - +0.5 162,347 + +1.2 162,347 + +0.7 162,347 + +0.1 162,347 + +1.4 162,347 + -0.5 162,347 + -0.2 162,347 + +1.1 162,347 + -0.2 162,347 + +0.5 162,347 + +0.6 162,347 + +1.8 162,347 + +1.8 162,347 + +0.6 162,348 - +2.8 162,348 - +1.0 162,718 + +0.2 162,718 + -0.5 162,718 + +0.9 162,718 + -0.3 162,718 + +0.3 162,718 + +0.2 162,718 + +1.0 162,718 + +0.7 162,741 + -0.1 162,741 + +1.3 162,741 + +0.7 162,741 + +1.2 162,741 + +0.1 162,741 + +0.6 162,741 + +1.3 162,741 + +0.1 162,741 + +2.1 162,741 + -0.7 162,741 + +0.6 162,741 + -1.2 162,741 + +0.8 162,741 + +0.5 162,741 + +0.2 162,741 + +1.3 162,741 + +2.7 162,741 + -0.0 162,741 + +0.7 162,741 + +0.1 162,741 + +0.9 162,742 - +0.9 162,742 - +2.0 162,742 - -0.7 162,742 - -0.8 162,742 - -0.2 162,742 - -0.7 162,742 - +0.2 162,743 + -0.0 162,743 + +0.5 162,807 + Psest_0164 0.33 +1.0 163,028 - +2.2 163,028 - +0.8 163,056 + +1.2 163,057 - -1.0 163,117 + Psest_0165 0.15 -0.8 163,118 - Psest_0165 0.15 +0.2 163,118 - Psest_0165 0.15 +0.2
Or see this region's nucleotide sequence