Experiment: Def Benzethonium chloride 0.008 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_1529 and Psest_1530 overlap by 4 nucleotides Psest_1530 and Psest_1531 overlap by 4 nucleotides Psest_1531 and Psest_1532 are separated by 43 nucleotides
Psest_1529: Psest_1529 - Predicted branched-chain amino acid permease (azaleucine resistance), at 1,631,594 to 1,632,310
_1529
Psest_1530: Psest_1530 - Predicted membrane protein, at 1,632,307 to 1,632,633
_1530
Psest_1531: Psest_1531 - hypothetical protein, at 1,632,630 to 1,634,042
_1531
Psest_1532: Psest_1532 - DNA recombination-dependent growth factor C, at 1,634,086 to 1,635,006
_1532
Position (kb)
1632
1633
1634
1635 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1631.846 kb on + strand, within Psest_1529 at 1631.846 kb on + strand, within Psest_1529 at 1631.846 kb on + strand, within Psest_1529 at 1631.846 kb on + strand, within Psest_1529 at 1631.846 kb on + strand, within Psest_1529 at 1631.846 kb on + strand, within Psest_1529 at 1631.847 kb on - strand, within Psest_1529 at 1631.847 kb on - strand, within Psest_1529 at 1631.847 kb on - strand, within Psest_1529 at 1631.847 kb on - strand, within Psest_1529 at 1631.847 kb on - strand, within Psest_1529 at 1631.848 kb on + strand, within Psest_1529 at 1631.975 kb on + strand, within Psest_1529 at 1632.014 kb on + strand, within Psest_1529 at 1632.014 kb on + strand, within Psest_1529 at 1632.014 kb on + strand, within Psest_1529 at 1632.014 kb on + strand, within Psest_1529 at 1632.014 kb on + strand, within Psest_1529 at 1632.014 kb on + strand, within Psest_1529 at 1632.014 kb on + strand, within Psest_1529 at 1632.014 kb on + strand, within Psest_1529 at 1632.014 kb on + strand, within Psest_1529 at 1632.014 kb on + strand, within Psest_1529 at 1632.014 kb on + strand, within Psest_1529 at 1632.014 kb on + strand, within Psest_1529 at 1632.014 kb on + strand, within Psest_1529 at 1632.014 kb on + strand, within Psest_1529 at 1632.014 kb on + strand, within Psest_1529 at 1632.014 kb on + strand, within Psest_1529 at 1632.014 kb on + strand, within Psest_1529 at 1632.015 kb on - strand, within Psest_1529 at 1632.015 kb on - strand, within Psest_1529 at 1632.015 kb on - strand, within Psest_1529 at 1632.015 kb on - strand, within Psest_1529 at 1632.015 kb on - strand, within Psest_1529 at 1632.015 kb on - strand, within Psest_1529 at 1632.015 kb on - strand, within Psest_1529 at 1632.015 kb on - strand, within Psest_1529 at 1632.015 kb on - strand, within Psest_1529 at 1632.015 kb on - strand, within Psest_1529 at 1632.015 kb on - strand, within Psest_1529 at 1632.015 kb on - strand, within Psest_1529 at 1632.015 kb on - strand, within Psest_1529 at 1632.015 kb on - strand, within Psest_1529 at 1632.015 kb on - strand, within Psest_1529 at 1632.015 kb on - strand, within Psest_1529 at 1632.015 kb on - strand, within Psest_1529 at 1632.015 kb on - strand, within Psest_1529 at 1632.210 kb on - strand, within Psest_1529 at 1632.210 kb on - strand, within Psest_1529 at 1632.306 kb on + strand at 1632.307 kb on - strand at 1632.312 kb on + strand at 1632.325 kb on - strand at 1632.325 kb on - strand at 1632.361 kb on + strand, within Psest_1530 at 1632.421 kb on + strand, within Psest_1530 at 1632.421 kb on + strand, within Psest_1530 at 1632.421 kb on + strand, within Psest_1530 at 1632.421 kb on + strand, within Psest_1530 at 1632.422 kb on - strand, within Psest_1530 at 1632.422 kb on - strand, within Psest_1530 at 1632.422 kb on - strand, within Psest_1530 at 1632.422 kb on - strand, within Psest_1530 at 1632.422 kb on - strand, within Psest_1530 at 1632.422 kb on - strand, within Psest_1530 at 1632.422 kb on - strand, within Psest_1530 at 1632.422 kb on - strand, within Psest_1530 at 1632.508 kb on + strand, within Psest_1530 at 1632.508 kb on + strand, within Psest_1530 at 1632.970 kb on + strand, within Psest_1531 at 1632.970 kb on + strand, within Psest_1531 at 1633.074 kb on + strand, within Psest_1531 at 1633.075 kb on - strand, within Psest_1531 at 1633.300 kb on + strand, within Psest_1531 at 1633.300 kb on + strand, within Psest_1531 at 1633.300 kb on + strand, within Psest_1531 at 1633.300 kb on + strand, within Psest_1531 at 1633.301 kb on - strand, within Psest_1531 at 1633.301 kb on - strand, within Psest_1531 at 1633.301 kb on - strand, within Psest_1531 at 1633.301 kb on - strand, within Psest_1531 at 1633.301 kb on - strand, within Psest_1531 at 1633.301 kb on - strand, within Psest_1531 at 1633.305 kb on - strand, within Psest_1531 at 1633.305 kb on - strand, within Psest_1531 at 1633.305 kb on - strand, within Psest_1531 at 1633.305 kb on - strand, within Psest_1531 at 1633.305 kb on - strand, within Psest_1531 at 1633.422 kb on + strand, within Psest_1531 at 1633.423 kb on - strand at 1633.423 kb on - strand, within Psest_1531 at 1633.493 kb on + strand, within Psest_1531 at 1633.493 kb on + strand, within Psest_1531 at 1633.494 kb on - strand, within Psest_1531 at 1633.494 kb on - strand, within Psest_1531 at 1633.637 kb on + strand, within Psest_1531 at 1633.637 kb on + strand, within Psest_1531 at 1633.637 kb on + strand, within Psest_1531 at 1633.638 kb on - strand, within Psest_1531 at 1633.638 kb on - strand, within Psest_1531 at 1633.638 kb on - strand, within Psest_1531 at 1633.638 kb on - strand, within Psest_1531 at 1633.740 kb on + strand, within Psest_1531 at 1633.740 kb on + strand, within Psest_1531 at 1633.740 kb on + strand, within Psest_1531 at 1633.740 kb on + strand, within Psest_1531 at 1633.740 kb on + strand, within Psest_1531 at 1633.740 kb on + strand, within Psest_1531 at 1633.741 kb on - strand, within Psest_1531 at 1633.741 kb on - strand, within Psest_1531 at 1633.756 kb on - strand, within Psest_1531 at 1633.756 kb on - strand, within Psest_1531 at 1633.933 kb on + strand at 1633.933 kb on + strand at 1633.933 kb on + strand at 1634.278 kb on + strand, within Psest_1532 at 1634.340 kb on + strand, within Psest_1532 at 1634.341 kb on - strand, within Psest_1532 at 1634.708 kb on + strand, within Psest_1532 at 1634.708 kb on + strand, within Psest_1532 at 1634.708 kb on + strand, within Psest_1532 at 1634.708 kb on + strand, within Psest_1532 at 1634.709 kb on - strand, within Psest_1532 at 1634.755 kb on + strand, within Psest_1532 at 1634.836 kb on + strand, within Psest_1532 at 1634.837 kb on - strand, within Psest_1532 at 1634.882 kb on + strand, within Psest_1532 at 1634.882 kb on + strand, within Psest_1532 at 1634.882 kb on + strand, within Psest_1532 at 1635.015 kb on - strand at 1635.015 kb on - strand at 1635.042 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Def Benzethonium chloride 0.008 mM remove 1,631,846 + Psest_1529 0.35 -0.0 1,631,846 + Psest_1529 0.35 -0.9 1,631,846 + Psest_1529 0.35 +1.3 1,631,846 + Psest_1529 0.35 -0.2 1,631,846 + Psest_1529 0.35 -0.2 1,631,846 + Psest_1529 0.35 -0.4 1,631,847 - Psest_1529 0.35 +0.3 1,631,847 - Psest_1529 0.35 +0.3 1,631,847 - Psest_1529 0.35 -0.2 1,631,847 - Psest_1529 0.35 -1.1 1,631,847 - Psest_1529 0.35 +0.5 1,631,848 + Psest_1529 0.35 -0.2 1,631,975 + Psest_1529 0.53 -1.1 1,632,014 + Psest_1529 0.59 -1.1 1,632,014 + Psest_1529 0.59 +0.4 1,632,014 + Psest_1529 0.59 +0.0 1,632,014 + Psest_1529 0.59 +0.9 1,632,014 + Psest_1529 0.59 -0.4 1,632,014 + Psest_1529 0.59 +1.1 1,632,014 + Psest_1529 0.59 +0.6 1,632,014 + Psest_1529 0.59 +0.5 1,632,014 + Psest_1529 0.59 +0.5 1,632,014 + Psest_1529 0.59 -0.3 1,632,014 + Psest_1529 0.59 +0.1 1,632,014 + Psest_1529 0.59 -0.9 1,632,014 + Psest_1529 0.59 -0.4 1,632,014 + Psest_1529 0.59 +1.3 1,632,014 + Psest_1529 0.59 -0.3 1,632,014 + Psest_1529 0.59 -0.5 1,632,014 + Psest_1529 0.59 -1.9 1,632,015 - Psest_1529 0.59 -0.1 1,632,015 - Psest_1529 0.59 -0.5 1,632,015 - Psest_1529 0.59 +1.1 1,632,015 - Psest_1529 0.59 +0.0 1,632,015 - Psest_1529 0.59 -0.7 1,632,015 - Psest_1529 0.59 +0.4 1,632,015 - Psest_1529 0.59 -0.2 1,632,015 - Psest_1529 0.59 +1.0 1,632,015 - Psest_1529 0.59 -0.5 1,632,015 - Psest_1529 0.59 -1.0 1,632,015 - Psest_1529 0.59 -0.3 1,632,015 - Psest_1529 0.59 -1.1 1,632,015 - Psest_1529 0.59 +0.1 1,632,015 - Psest_1529 0.59 -0.1 1,632,015 - Psest_1529 0.59 +0.1 1,632,015 - Psest_1529 0.59 +0.0 1,632,015 - Psest_1529 0.59 -1.6 1,632,015 - Psest_1529 0.59 -0.5 1,632,210 - Psest_1529 0.86 -0.5 1,632,210 - Psest_1529 0.86 -0.4 1,632,306 + +0.8 1,632,307 - +0.4 1,632,312 + -0.5 1,632,325 - -0.4 1,632,325 - +0.0 1,632,361 + Psest_1530 0.17 +1.0 1,632,421 + Psest_1530 0.35 +0.1 1,632,421 + Psest_1530 0.35 +0.9 1,632,421 + Psest_1530 0.35 -0.1 1,632,421 + Psest_1530 0.35 +0.5 1,632,422 - Psest_1530 0.35 -0.7 1,632,422 - Psest_1530 0.35 +0.3 1,632,422 - Psest_1530 0.35 -0.9 1,632,422 - Psest_1530 0.35 -0.7 1,632,422 - Psest_1530 0.35 -1.1 1,632,422 - Psest_1530 0.35 -1.2 1,632,422 - Psest_1530 0.35 -0.3 1,632,422 - Psest_1530 0.35 -1.5 1,632,508 + Psest_1530 0.61 +0.2 1,632,508 + Psest_1530 0.61 +0.4 1,632,970 + Psest_1531 0.24 +0.7 1,632,970 + Psest_1531 0.24 +0.2 1,633,074 + Psest_1531 0.31 -1.8 1,633,075 - Psest_1531 0.31 -1.1 1,633,300 + Psest_1531 0.47 +2.2 1,633,300 + Psest_1531 0.47 -0.2 1,633,300 + Psest_1531 0.47 -0.4 1,633,300 + Psest_1531 0.47 +0.3 1,633,301 - Psest_1531 0.47 -1.1 1,633,301 - Psest_1531 0.47 -1.5 1,633,301 - Psest_1531 0.47 -0.8 1,633,301 - Psest_1531 0.47 -0.6 1,633,301 - Psest_1531 0.47 -2.6 1,633,301 - Psest_1531 0.47 -0.8 1,633,305 - Psest_1531 0.48 -0.3 1,633,305 - Psest_1531 0.48 +0.3 1,633,305 - Psest_1531 0.48 +0.2 1,633,305 - Psest_1531 0.48 -1.1 1,633,305 - Psest_1531 0.48 +2.0 1,633,422 + Psest_1531 0.56 +0.4 1,633,423 - +0.2 1,633,423 - Psest_1531 0.56 -2.6 1,633,493 + Psest_1531 0.61 +0.2 1,633,493 + Psest_1531 0.61 +1.2 1,633,494 - Psest_1531 0.61 -0.4 1,633,494 - Psest_1531 0.61 -1.1 1,633,637 + Psest_1531 0.71 +0.2 1,633,637 + Psest_1531 0.71 -0.1 1,633,637 + Psest_1531 0.71 +0.9 1,633,638 - Psest_1531 0.71 +0.5 1,633,638 - Psest_1531 0.71 -1.0 1,633,638 - Psest_1531 0.71 +0.9 1,633,638 - Psest_1531 0.71 -2.5 1,633,740 + Psest_1531 0.79 +0.2 1,633,740 + Psest_1531 0.79 -0.9 1,633,740 + Psest_1531 0.79 +0.5 1,633,740 + Psest_1531 0.79 -0.6 1,633,740 + Psest_1531 0.79 +0.6 1,633,740 + Psest_1531 0.79 -1.8 1,633,741 - Psest_1531 0.79 -1.0 1,633,741 - Psest_1531 0.79 -0.8 1,633,756 - Psest_1531 0.80 -0.4 1,633,756 - Psest_1531 0.80 -2.6 1,633,933 + +1.0 1,633,933 + +0.9 1,633,933 + +1.7 1,634,278 + Psest_1532 0.21 -0.5 1,634,340 + Psest_1532 0.28 -0.3 1,634,341 - Psest_1532 0.28 -0.7 1,634,708 + Psest_1532 0.68 -3.4 1,634,708 + Psest_1532 0.68 -1.3 1,634,708 + Psest_1532 0.68 -1.5 1,634,708 + Psest_1532 0.68 -1.9 1,634,709 - Psest_1532 0.68 -0.9 1,634,755 + Psest_1532 0.73 +0.9 1,634,836 + Psest_1532 0.81 +1.1 1,634,837 - Psest_1532 0.82 -1.0 1,634,882 + Psest_1532 0.86 +0.7 1,634,882 + Psest_1532 0.86 -0.8 1,634,882 + Psest_1532 0.86 -1.6 1,635,015 - +0.1 1,635,015 - -1.2 1,635,042 + -0.2
Or see this region's nucleotide sequence