Experiment: Def Benzethonium chloride 0.008 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_1343 and Psest_1344 are separated by 230 nucleotides Psest_1344 and Psest_1345 are separated by 11 nucleotides Psest_1345 and Psest_1346 are separated by 246 nucleotides
Psest_1343: Psest_1343 - Serine/threonine protein phosphatase, at 1,454,143 to 1,454,919
_1343
Psest_1344: Psest_1344 - rRNA methylases, at 1,455,150 to 1,455,881
_1344
Psest_1345: Psest_1345 - Uncharacterized FAD-dependent dehydrogenases, at 1,455,893 to 1,457,530
_1345
Psest_1346: Psest_1346 - 23S rRNA methylase, at 1,457,777 to 1,458,397
_1346
Position (kb)
1455
1456
1457
1458 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1455.034 kb on + strand at 1455.034 kb on + strand at 1455.049 kb on - strand at 1455.151 kb on + strand at 1455.166 kb on + strand at 1455.166 kb on + strand at 1455.166 kb on + strand at 1455.402 kb on + strand, within Psest_1344 at 1455.402 kb on + strand, within Psest_1344 at 1455.402 kb on + strand, within Psest_1344 at 1455.402 kb on + strand, within Psest_1344 at 1455.402 kb on + strand, within Psest_1344 at 1455.402 kb on + strand, within Psest_1344 at 1455.403 kb on - strand, within Psest_1344 at 1455.403 kb on - strand, within Psest_1344 at 1455.403 kb on - strand, within Psest_1344 at 1455.552 kb on + strand, within Psest_1344 at 1455.552 kb on + strand, within Psest_1344 at 1455.553 kb on - strand, within Psest_1344 at 1455.553 kb on - strand, within Psest_1344 at 1455.553 kb on - strand, within Psest_1344 at 1455.565 kb on + strand, within Psest_1344 at 1455.565 kb on + strand, within Psest_1344 at 1455.565 kb on + strand, within Psest_1344 at 1455.565 kb on + strand, within Psest_1344 at 1455.565 kb on + strand, within Psest_1344 at 1455.565 kb on + strand, within Psest_1344 at 1455.566 kb on - strand, within Psest_1344 at 1455.566 kb on - strand, within Psest_1344 at 1455.566 kb on - strand, within Psest_1344 at 1455.566 kb on - strand, within Psest_1344 at 1455.566 kb on - strand, within Psest_1344 at 1455.624 kb on + strand, within Psest_1344 at 1455.739 kb on + strand, within Psest_1344 at 1455.739 kb on + strand, within Psest_1344 at 1455.739 kb on + strand, within Psest_1344 at 1455.739 kb on + strand, within Psest_1344 at 1455.739 kb on + strand, within Psest_1344 at 1455.739 kb on + strand, within Psest_1344 at 1455.739 kb on + strand, within Psest_1344 at 1455.739 kb on + strand, within Psest_1344 at 1455.740 kb on - strand, within Psest_1344 at 1455.740 kb on - strand, within Psest_1344 at 1455.740 kb on - strand, within Psest_1344 at 1455.740 kb on - strand, within Psest_1344 at 1455.740 kb on - strand, within Psest_1344 at 1455.740 kb on - strand, within Psest_1344 at 1455.740 kb on - strand, within Psest_1344 at 1456.023 kb on + strand at 1456.189 kb on - strand, within Psest_1345 at 1456.223 kb on + strand, within Psest_1345 at 1456.236 kb on + strand, within Psest_1345 at 1456.236 kb on + strand, within Psest_1345 at 1456.237 kb on - strand, within Psest_1345 at 1456.335 kb on + strand, within Psest_1345 at 1456.540 kb on - strand, within Psest_1345 at 1456.540 kb on - strand, within Psest_1345 at 1456.567 kb on - strand, within Psest_1345 at 1456.567 kb on - strand, within Psest_1345 at 1456.567 kb on - strand, within Psest_1345 at 1456.578 kb on + strand, within Psest_1345 at 1456.578 kb on + strand, within Psest_1345 at 1456.579 kb on - strand, within Psest_1345 at 1456.612 kb on - strand, within Psest_1345 at 1456.612 kb on - strand, within Psest_1345 at 1456.612 kb on - strand, within Psest_1345 at 1456.692 kb on + strand, within Psest_1345 at 1456.692 kb on + strand, within Psest_1345 at 1456.692 kb on + strand, within Psest_1345 at 1456.692 kb on + strand, within Psest_1345 at 1456.693 kb on - strand, within Psest_1345 at 1456.693 kb on - strand, within Psest_1345 at 1456.693 kb on - strand, within Psest_1345 at 1456.693 kb on - strand, within Psest_1345 at 1456.693 kb on - strand, within Psest_1345 at 1456.693 kb on - strand, within Psest_1345 at 1456.693 kb on - strand, within Psest_1345 at 1456.754 kb on + strand, within Psest_1345 at 1456.755 kb on - strand, within Psest_1345 at 1456.755 kb on - strand, within Psest_1345 at 1456.755 kb on - strand, within Psest_1345 at 1456.938 kb on + strand, within Psest_1345 at 1456.938 kb on + strand, within Psest_1345 at 1456.938 kb on + strand, within Psest_1345 at 1456.938 kb on + strand, within Psest_1345 at 1456.938 kb on + strand, within Psest_1345 at 1456.938 kb on + strand, within Psest_1345 at 1456.938 kb on + strand, within Psest_1345 at 1456.938 kb on + strand, within Psest_1345 at 1456.938 kb on + strand, within Psest_1345 at 1456.938 kb on + strand, within Psest_1345 at 1456.938 kb on + strand, within Psest_1345 at 1456.938 kb on + strand, within Psest_1345 at 1456.938 kb on + strand, within Psest_1345 at 1456.938 kb on + strand, within Psest_1345 at 1456.938 kb on + strand, within Psest_1345 at 1456.938 kb on + strand, within Psest_1345 at 1456.938 kb on + strand, within Psest_1345 at 1456.938 kb on + strand, within Psest_1345 at 1456.938 kb on + strand, within Psest_1345 at 1456.938 kb on + strand, within Psest_1345 at 1456.939 kb on - strand, within Psest_1345 at 1456.939 kb on - strand, within Psest_1345 at 1456.939 kb on - strand, within Psest_1345 at 1456.939 kb on - strand, within Psest_1345 at 1456.939 kb on - strand, within Psest_1345 at 1456.939 kb on - strand, within Psest_1345 at 1456.939 kb on - strand, within Psest_1345 at 1456.939 kb on - strand, within Psest_1345 at 1456.939 kb on - strand, within Psest_1345 at 1456.939 kb on - strand, within Psest_1345 at 1456.939 kb on - strand, within Psest_1345 at 1456.939 kb on - strand, within Psest_1345 at 1456.939 kb on - strand, within Psest_1345 at 1456.939 kb on - strand, within Psest_1345 at 1456.939 kb on - strand, within Psest_1345 at 1456.939 kb on - strand, within Psest_1345 at 1456.939 kb on - strand, within Psest_1345 at 1456.996 kb on - strand, within Psest_1345 at 1457.275 kb on - strand, within Psest_1345 at 1457.364 kb on + strand, within Psest_1345 at 1457.364 kb on + strand, within Psest_1345 at 1457.364 kb on + strand, within Psest_1345 at 1457.364 kb on + strand, within Psest_1345 at 1457.364 kb on + strand, within Psest_1345 at 1457.364 kb on + strand, within Psest_1345 at 1457.364 kb on + strand, within Psest_1345 at 1457.364 kb on + strand, within Psest_1345 at 1457.365 kb on - strand, within Psest_1345 at 1457.365 kb on - strand, within Psest_1345 at 1457.365 kb on - strand, within Psest_1345 at 1457.365 kb on - strand, within Psest_1345 at 1457.365 kb on - strand, within Psest_1345 at 1457.365 kb on - strand, within Psest_1345 at 1457.403 kb on + strand at 1457.403 kb on + strand at 1457.403 kb on + strand at 1457.404 kb on - strand at 1457.404 kb on - strand at 1457.404 kb on - strand at 1457.404 kb on - strand at 1457.404 kb on - strand at 1457.404 kb on - strand at 1457.689 kb on + strand at 1457.689 kb on + strand at 1457.689 kb on + strand at 1457.691 kb on + strand at 1458.440 kb on - strand at 1458.455 kb on + strand at 1458.513 kb on + strand at 1458.513 kb on + strand at 1458.514 kb on - strand at 1458.514 kb on - strand at 1458.514 kb on - strand at 1458.514 kb on - strand at 1458.514 kb on - strand at 1458.514 kb on - strand at 1458.514 kb on - strand at 1458.514 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Def Benzethonium chloride 0.008 mM remove 1,455,034 + -0.1 1,455,034 + -0.1 1,455,049 - -2.0 1,455,151 + -2.9 1,455,166 + -2.0 1,455,166 + +0.7 1,455,166 + -0.7 1,455,402 + Psest_1344 0.34 -0.5 1,455,402 + Psest_1344 0.34 -0.1 1,455,402 + Psest_1344 0.34 -1.4 1,455,402 + Psest_1344 0.34 +0.0 1,455,402 + Psest_1344 0.34 -0.9 1,455,402 + Psest_1344 0.34 +1.1 1,455,403 - Psest_1344 0.35 -0.6 1,455,403 - Psest_1344 0.35 -1.5 1,455,403 - Psest_1344 0.35 -2.6 1,455,552 + Psest_1344 0.55 -1.6 1,455,552 + Psest_1344 0.55 +0.1 1,455,553 - Psest_1344 0.55 -1.4 1,455,553 - Psest_1344 0.55 -1.1 1,455,553 - Psest_1344 0.55 -2.6 1,455,565 + Psest_1344 0.57 -0.2 1,455,565 + Psest_1344 0.57 +0.1 1,455,565 + Psest_1344 0.57 -0.4 1,455,565 + Psest_1344 0.57 +0.7 1,455,565 + Psest_1344 0.57 +1.2 1,455,565 + Psest_1344 0.57 +0.2 1,455,566 - Psest_1344 0.57 -0.7 1,455,566 - Psest_1344 0.57 -0.4 1,455,566 - Psest_1344 0.57 -1.4 1,455,566 - Psest_1344 0.57 -0.1 1,455,566 - Psest_1344 0.57 -1.5 1,455,624 + Psest_1344 0.65 +0.2 1,455,739 + Psest_1344 0.80 +0.2 1,455,739 + Psest_1344 0.80 -0.5 1,455,739 + Psest_1344 0.80 -0.7 1,455,739 + Psest_1344 0.80 -0.5 1,455,739 + Psest_1344 0.80 -1.0 1,455,739 + Psest_1344 0.80 -0.2 1,455,739 + Psest_1344 0.80 -0.1 1,455,739 + Psest_1344 0.80 -0.9 1,455,740 - Psest_1344 0.81 -2.9 1,455,740 - Psest_1344 0.81 -2.9 1,455,740 - Psest_1344 0.81 -2.3 1,455,740 - Psest_1344 0.81 -0.5 1,455,740 - Psest_1344 0.81 -1.3 1,455,740 - Psest_1344 0.81 -0.9 1,455,740 - Psest_1344 0.81 -0.8 1,456,023 + -0.9 1,456,189 - Psest_1345 0.18 +0.0 1,456,223 + Psest_1345 0.20 -2.0 1,456,236 + Psest_1345 0.21 -1.1 1,456,236 + Psest_1345 0.21 -0.6 1,456,237 - Psest_1345 0.21 -1.4 1,456,335 + Psest_1345 0.27 -1.2 1,456,540 - Psest_1345 0.39 +1.8 1,456,540 - Psest_1345 0.39 +0.1 1,456,567 - Psest_1345 0.41 +0.2 1,456,567 - Psest_1345 0.41 -0.3 1,456,567 - Psest_1345 0.41 -0.5 1,456,578 + Psest_1345 0.42 -0.6 1,456,578 + Psest_1345 0.42 -0.4 1,456,579 - Psest_1345 0.42 -0.1 1,456,612 - Psest_1345 0.44 +0.0 1,456,612 - Psest_1345 0.44 -0.8 1,456,612 - Psest_1345 0.44 +0.4 1,456,692 + Psest_1345 0.49 -0.7 1,456,692 + Psest_1345 0.49 -0.9 1,456,692 + Psest_1345 0.49 -0.2 1,456,692 + Psest_1345 0.49 -0.1 1,456,693 - Psest_1345 0.49 -0.9 1,456,693 - Psest_1345 0.49 -0.5 1,456,693 - Psest_1345 0.49 -1.3 1,456,693 - Psest_1345 0.49 -0.9 1,456,693 - Psest_1345 0.49 +0.2 1,456,693 - Psest_1345 0.49 -0.1 1,456,693 - Psest_1345 0.49 +0.3 1,456,754 + Psest_1345 0.53 -0.8 1,456,755 - Psest_1345 0.53 +0.8 1,456,755 - Psest_1345 0.53 +0.0 1,456,755 - Psest_1345 0.53 -0.0 1,456,938 + Psest_1345 0.64 +0.7 1,456,938 + Psest_1345 0.64 -0.8 1,456,938 + Psest_1345 0.64 -0.1 1,456,938 + Psest_1345 0.64 -0.1 1,456,938 + Psest_1345 0.64 -0.5 1,456,938 + Psest_1345 0.64 +0.0 1,456,938 + Psest_1345 0.64 -2.5 1,456,938 + Psest_1345 0.64 +0.6 1,456,938 + Psest_1345 0.64 -1.9 1,456,938 + Psest_1345 0.64 -0.1 1,456,938 + Psest_1345 0.64 +0.6 1,456,938 + Psest_1345 0.64 -0.4 1,456,938 + Psest_1345 0.64 -0.1 1,456,938 + Psest_1345 0.64 -0.1 1,456,938 + Psest_1345 0.64 -1.6 1,456,938 + Psest_1345 0.64 -0.1 1,456,938 + Psest_1345 0.64 -1.7 1,456,938 + Psest_1345 0.64 +0.4 1,456,938 + Psest_1345 0.64 -0.1 1,456,938 + Psest_1345 0.64 +0.0 1,456,939 - Psest_1345 0.64 -1.5 1,456,939 - Psest_1345 0.64 -0.3 1,456,939 - Psest_1345 0.64 -0.5 1,456,939 - Psest_1345 0.64 -0.8 1,456,939 - Psest_1345 0.64 -0.1 1,456,939 - Psest_1345 0.64 +0.9 1,456,939 - Psest_1345 0.64 +2.0 1,456,939 - Psest_1345 0.64 +0.8 1,456,939 - Psest_1345 0.64 -1.2 1,456,939 - Psest_1345 0.64 -0.1 1,456,939 - Psest_1345 0.64 +0.0 1,456,939 - Psest_1345 0.64 -1.0 1,456,939 - Psest_1345 0.64 -0.4 1,456,939 - Psest_1345 0.64 -0.4 1,456,939 - Psest_1345 0.64 -0.6 1,456,939 - Psest_1345 0.64 +0.1 1,456,939 - Psest_1345 0.64 -1.5 1,456,996 - Psest_1345 0.67 +0.1 1,457,275 - Psest_1345 0.84 +0.9 1,457,364 + Psest_1345 0.90 -1.0 1,457,364 + Psest_1345 0.90 +0.1 1,457,364 + Psest_1345 0.90 -1.2 1,457,364 + Psest_1345 0.90 -2.0 1,457,364 + Psest_1345 0.90 -0.6 1,457,364 + Psest_1345 0.90 -0.5 1,457,364 + Psest_1345 0.90 +0.6 1,457,364 + Psest_1345 0.90 -0.3 1,457,365 - Psest_1345 0.90 -1.0 1,457,365 - Psest_1345 0.90 +0.1 1,457,365 - Psest_1345 0.90 +0.8 1,457,365 - Psest_1345 0.90 +1.2 1,457,365 - Psest_1345 0.90 +0.7 1,457,365 - Psest_1345 0.90 -0.3 1,457,403 + -0.6 1,457,403 + -1.7 1,457,403 + +0.0 1,457,404 - -0.9 1,457,404 - +0.7 1,457,404 - +0.5 1,457,404 - +0.1 1,457,404 - +0.8 1,457,404 - -1.9 1,457,689 + -0.9 1,457,689 + -0.1 1,457,689 + -1.3 1,457,691 + +0.1 1,458,440 - +1.4 1,458,455 + -1.4 1,458,513 + -2.1 1,458,513 + -1.8 1,458,514 - +2.0 1,458,514 - +2.1 1,458,514 - +1.1 1,458,514 - -0.2 1,458,514 - +0.7 1,458,514 - +1.2 1,458,514 - -0.9 1,458,514 - +0.8
Or see this region's nucleotide sequence