Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_0292
Experiment: Def Polymyxin B sulfate 0.0001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Def Polymyxin B sulfate 0.0001 mg/ml |
---|---|---|---|---|---|
remove | |||||
306,595 | - | -0.7 | |||
306,595 | - | -0.9 | |||
306,595 | - | +1.4 | |||
306,732 | + | Psest_0291 | 0.23 | -0.5 | |
306,732 | + | Psest_0291 | 0.23 | +0.1 | |
306,741 | + | Psest_0291 | 0.24 | -0.2 | |
307,482 | - | -1.8 | |||
307,545 | + | -2.3 | |||
307,545 | + | -0.5 | |||
307,557 | + | -2.1 | |||
307,667 | + | Psest_0292 | 0.19 | -1.4 | |
307,667 | + | Psest_0292 | 0.19 | -3.4 | |
307,667 | + | Psest_0292 | 0.19 | -1.4 | |
307,668 | - | Psest_0292 | 0.19 | -0.2 | |
307,668 | - | Psest_0292 | 0.19 | -1.5 | |
307,668 | - | Psest_0292 | 0.19 | -0.1 | |
308,022 | + | Psest_0292 | 0.88 | -1.4 | |
308,607 | + | Psest_0294 | 0.14 | +0.7 | |
309,006 | + | Psest_0294 | 0.84 | -1.6 | |
309,006 | + | Psest_0294 | 0.84 | -0.5 | |
309,007 | - | Psest_0294 | 0.84 | -1.9 | |
309,007 | - | Psest_0294 | 0.84 | -0.8 | |
309,007 | - | Psest_0294 | 0.84 | -1.0 | |
309,007 | - | Psest_0294 | 0.84 | -0.8 | |
309,007 | - | Psest_0294 | 0.84 | -0.3 | |
309,007 | - | Psest_0294 | 0.84 | +0.1 | |
309,007 | - | Psest_0294 | 0.84 | -0.1 | |
309,007 | - | Psest_0294 | 0.84 | -1.4 |
Or see this region's nucleotide sequence