Experiment: Def Polymyxin B sulfate 0.00008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_3840 and Psest_3841 overlap by 1 nucleotides Psest_3841 and Psest_3842 are separated by 237 nucleotides
Psest_3840: Psest_3840 - D-lactate/glycolate dehydrogenase, FAD binding subunit GlcE (EC 1.1.99.6; EC 1.1.99.14) (from data) , at 4,011,203 to 4,012,264
_3840
Psest_3841: Psest_3841 - D-lactate/glycolate dehydrogenase, FAD-linked subunit GlcD (EC 1.1.99.6; EC 1.1.99.14) (from data) , at 4,012,264 to 4,013,763
_3841
Psest_3842: Psest_3842 - Transcriptional regulators, at 4,014,001 to 4,014,774
_3842
Position (kb)
4012
4013
4014 Strain fitness (log2 ratio)
-1
0
1
2 at 4011.722 kb on + strand, within Psest_3840 at 4011.723 kb on - strand, within Psest_3840 at 4012.095 kb on + strand, within Psest_3840 at 4012.095 kb on + strand, within Psest_3840 at 4012.096 kb on - strand, within Psest_3840 at 4012.096 kb on - strand, within Psest_3840 at 4012.096 kb on - strand, within Psest_3840 at 4012.133 kb on + strand, within Psest_3840 at 4012.133 kb on + strand, within Psest_3840 at 4012.134 kb on - strand, within Psest_3840 at 4012.709 kb on + strand, within Psest_3841 at 4012.709 kb on + strand, within Psest_3841 at 4012.710 kb on - strand, within Psest_3841 at 4012.710 kb on - strand, within Psest_3841 at 4012.710 kb on - strand, within Psest_3841 at 4012.710 kb on - strand, within Psest_3841 at 4012.712 kb on + strand, within Psest_3841 at 4012.713 kb on - strand, within Psest_3841 at 4012.713 kb on - strand, within Psest_3841 at 4013.250 kb on - strand, within Psest_3841 at 4013.333 kb on + strand, within Psest_3841 at 4013.334 kb on - strand, within Psest_3841 at 4013.334 kb on - strand, within Psest_3841 at 4013.337 kb on - strand, within Psest_3841 at 4013.337 kb on - strand, within Psest_3841 at 4013.337 kb on - strand, within Psest_3841 at 4013.337 kb on - strand, within Psest_3841 at 4013.337 kb on - strand, within Psest_3841 at 4013.337 kb on - strand, within Psest_3841 at 4013.346 kb on - strand, within Psest_3841 at 4013.346 kb on - strand, within Psest_3841 at 4013.346 kb on - strand, within Psest_3841 at 4013.346 kb on - strand, within Psest_3841 at 4013.633 kb on + strand at 4013.751 kb on - strand at 4013.751 kb on - strand at 4013.751 kb on - strand at 4013.942 kb on - strand at 4014.173 kb on + strand, within Psest_3842 at 4014.296 kb on - strand, within Psest_3842 at 4014.383 kb on + strand, within Psest_3842 at 4014.577 kb on + strand, within Psest_3842 at 4014.684 kb on + strand, within Psest_3842
Per-strain Table
Position Strand Gene LocusTag Fraction Def Polymyxin B sulfate 0.00008 mg/ml remove 4,011,722 + Psest_3840 0.49 -1.7 4,011,723 - Psest_3840 0.49 +1.2 4,012,095 + Psest_3840 0.84 -0.9 4,012,095 + Psest_3840 0.84 -0.1 4,012,096 - Psest_3840 0.84 +0.6 4,012,096 - Psest_3840 0.84 +0.2 4,012,096 - Psest_3840 0.84 +0.7 4,012,133 + Psest_3840 0.88 +0.7 4,012,133 + Psest_3840 0.88 +0.7 4,012,134 - Psest_3840 0.88 +0.9 4,012,709 + Psest_3841 0.30 +0.9 4,012,709 + Psest_3841 0.30 -0.8 4,012,710 - Psest_3841 0.30 +1.6 4,012,710 - Psest_3841 0.30 +0.9 4,012,710 - Psest_3841 0.30 +1.5 4,012,710 - Psest_3841 0.30 +0.7 4,012,712 + Psest_3841 0.30 -0.4 4,012,713 - Psest_3841 0.30 +1.4 4,012,713 - Psest_3841 0.30 +2.3 4,013,250 - Psest_3841 0.66 +1.5 4,013,333 + Psest_3841 0.71 -0.8 4,013,334 - Psest_3841 0.71 +0.7 4,013,334 - Psest_3841 0.71 +1.6 4,013,337 - Psest_3841 0.72 +0.7 4,013,337 - Psest_3841 0.72 +0.4 4,013,337 - Psest_3841 0.72 +1.7 4,013,337 - Psest_3841 0.72 +1.7 4,013,337 - Psest_3841 0.72 +1.9 4,013,337 - Psest_3841 0.72 +1.8 4,013,346 - Psest_3841 0.72 +2.1 4,013,346 - Psest_3841 0.72 +1.7 4,013,346 - Psest_3841 0.72 +2.7 4,013,346 - Psest_3841 0.72 +1.3 4,013,633 + -0.8 4,013,751 - +1.0 4,013,751 - +1.5 4,013,751 - +1.1 4,013,942 - +1.3 4,014,173 + Psest_3842 0.22 -0.4 4,014,296 - Psest_3842 0.38 -0.1 4,014,383 + Psest_3842 0.49 -0.6 4,014,577 + Psest_3842 0.74 +0.1 4,014,684 + Psest_3842 0.88 +0.3
Or see this region's nucleotide sequence