Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3838
Experiment: Def Polymyxin B sulfate 0.00008 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Def Polymyxin B sulfate 0.00008 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 4,008,519 | + | Psest_3837 | 0.56 | -0.9 | |
| 4,008,520 | - | Psest_3837 | 0.56 | +1.7 | |
| 4,009,065 | + | Psest_3837 | 0.81 | +1.1 | |
| 4,009,065 | + | Psest_3837 | 0.81 | +0.5 | |
| 4,009,105 | - | Psest_3837 | 0.83 | +0.2 | |
| 4,009,739 | + | Psest_3838 | 0.59 | -0.2 | |
| 4,009,740 | - | Psest_3838 | 0.59 | +0.6 | |
| 4,009,831 | - | Psest_3838 | 0.81 | +0.2 | |
| 4,009,925 | + | -2.5 | |||
| 4,009,926 | - | +1.1 | |||
| 4,009,926 | - | +1.0 | |||
| 4,009,926 | - | +0.8 | |||
| 4,009,926 | - | +0.9 | |||
| 4,010,157 | + | Psest_3839 | 0.15 | +0.2 | |
| 4,010,158 | - | Psest_3839 | 0.15 | +0.6 | |
| 4,010,556 | + | Psest_3839 | 0.47 | -0.3 | |
| 4,010,557 | - | Psest_3839 | 0.47 | +0.7 |
Or see this region's nucleotide sequence