Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2831

Experiment: Def Polymyxin B sulfate 0.00008 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntPsest_2829 and Psest_2830 are separated by 1 nucleotidesPsest_2830 and Psest_2831 overlap by 4 nucleotidesPsest_2831 and Psest_2832 are separated by 103 nucleotides Psest_2829: Psest_2829 - lipid-A-disaccharide synthase, at 3,019,931 to 3,021,064 _2829 Psest_2830: Psest_2830 - acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase, at 3,021,066 to 3,021,842 _2830 Psest_2831: Psest_2831 - beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ, at 3,021,839 to 3,022,279 _2831 Psest_2832: Psest_2832 - UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, at 3,022,383 to 3,023,441 _2832 Position (kb) 3021 3022 3023Strain fitness (log2 ratio) -1 0 1at 3021.843 kb on - strandat 3022.305 kb on - strandat 3022.305 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Def Polymyxin B sulfate 0.00008 mg/ml
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3,021,843 - +0.6
3,022,305 - +1.5
3,022,305 - +0.2

Or see this region's nucleotide sequence