Strain Fitness in Methanococcus maripaludis JJ around MMJJ_RS00765

Experiment: McCas_formate_complete Ticarcillin 12.5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	McCas_formate_complete Ticarcillin 12.5 mM
144,831	+		MMJJ_RS00750	0.84	-1.6
144,831	+		MMJJ_RS00750	0.84	-1.8
144,845	-		MMJJ_RS00750	0.86	+0.1
144,910	-				+2.4
144,911	+				+1.3
144,916	-				+1.6
144,916	-				+0.2
144,938	+				+0.9
144,938	+				-1.4
144,949	-				+1.2
144,953	-				+0.3
144,954	+				+1.1
144,995	+				-0.6
144,996	-				+1.3
144,996	-				-5.3
145,066	+		MMJJ_RS00755	0.24	+2.4
145,074	+		MMJJ_RS00755	0.28	-1.3
145,106	-		MMJJ_RS00755	0.42	+3.2
145,137	-		MMJJ_RS00755	0.55	-2.7
145,137	-		MMJJ_RS00755	0.55	+1.5
145,138	+		MMJJ_RS00755	0.56	-0.9
145,146	+		MMJJ_RS00755	0.59	+3.0
145,164	-		MMJJ_RS00755	0.67	+0.0
145,164	-		MMJJ_RS00755	0.67	+2.2
145,164	-		MMJJ_RS00755	0.67	-0.6
145,165	+		MMJJ_RS00755	0.68	+1.3
145,182	+		MMJJ_RS00755	0.75	+1.8
145,184	+		MMJJ_RS00755	0.76	-1.5
145,187	-		MMJJ_RS00755	0.77	+1.5
145,190	-		MMJJ_RS00755	0.79	+0.1
145,190	-		MMJJ_RS00755	0.79	-0.3
145,191	+		MMJJ_RS00755	0.79	+0.8
145,191	+		MMJJ_RS00755	0.79	+0.0
145,193	+		MMJJ_RS00755	0.80	-3.0
145,193	+		MMJJ_RS00755	0.80	+0.3
145,193	+		MMJJ_RS00755	0.80	+0.4
145,230	+				-0.9
145,240	-				+2.2
145,240	-				-3.0
145,240	-				+1.1
145,240	-				+2.2
145,240	-				-2.6
145,240	-				-2.4
145,240	-				+1.1
145,241	+				+0.4
145,241	+				-1.8
145,241	+				+0.3
145,241	+				+1.5
145,241	+				-1.2
145,241	+				+2.6
145,241	+				-0.6
145,242	-				-1.9
145,243	+				+3.6
145,264	-				-0.6
145,265	+				+3.0
145,268	-				+0.8
145,268	-				+3.1
145,269	+				+1.9
145,269	+				+1.3
145,271	+				+3.9
145,271	+				+0.4
145,271	+				-1.4
145,277	-				-3.2
145,286	-				+3.8
145,330	+				-1.3
145,332	-				-1.6
145,333	+				+2.0
145,402	-		MMJJ_RS00760	0.16	-2.1
145,402	-		MMJJ_RS00760	0.16	-0.3
145,403	+		MMJJ_RS00760	0.17	+1.9
145,407	+		MMJJ_RS00760	0.18	+1.0
145,407	+		MMJJ_RS00760	0.18	+1.9
145,407	+		MMJJ_RS00760	0.18	+0.0
145,407	+		MMJJ_RS00760	0.18	+1.7
145,407	+		MMJJ_RS00760	0.18	-1.1
145,408	-		MMJJ_RS00760	0.18	+1.6
145,409	+		MMJJ_RS00760	0.18	+3.8
145,417	-		MMJJ_RS00760	0.20	-2.6
145,417	-		MMJJ_RS00760	0.20	+1.2
145,431	-		MMJJ_RS00760	0.24	+2.4
145,432	+		MMJJ_RS00760	0.24	-0.3
145,432	+		MMJJ_RS00760	0.24	-1.7
145,432	+		MMJJ_RS00760	0.24	+1.4
145,433	-		MMJJ_RS00760	0.24	+0.8
145,433	-		MMJJ_RS00760	0.24	+1.6
145,484	-		MMJJ_RS00760	0.37	-4.3
145,523	-		MMJJ_RS00760	0.47	+2.2
145,524	+		MMJJ_RS00760	0.47	+3.6
145,561	-		MMJJ_RS00760	0.56	-3.4
145,602	+		MMJJ_RS00760	0.66	+0.7
145,618	-		MMJJ_RS00760	0.70	+1.7
145,637	-		MMJJ_RS00760	0.75	-2.9
145,637	-		MMJJ_RS00760	0.75	+0.7
145,637	-		MMJJ_RS00760	0.75	+1.3
145,637	-		MMJJ_RS00760	0.75	+2.0
145,638	+		MMJJ_RS00760	0.75	+1.5
145,647	+		MMJJ_RS00760	0.78	-3.4
145,684	-		MMJJ_RS00760	0.87	+2.3
145,685	+		MMJJ_RS00760	0.87	-2.5
145,688	-		MMJJ_RS00760	0.88	-0.6
145,688	-		MMJJ_RS00760	0.88	-3.0
145,688	-		MMJJ_RS00760	0.88	-3.4
145,689	+		MMJJ_RS00760	0.88	-1.3
145,689	+		MMJJ_RS00760	0.88	-1.6
145,689	+		MMJJ_RS00760	0.88	-4.2
145,690	-		MMJJ_RS00760	0.88	-1.4
145,690	-		MMJJ_RS00760	0.88	+0.5
145,690	-		MMJJ_RS00760	0.88	-4.0
145,690	-		MMJJ_RS00760	0.88	+1.8
145,691	+		MMJJ_RS00760	0.89	-0.4
145,691	+		MMJJ_RS00760	0.89	+4.3
145,691	+		MMJJ_RS00760	0.89	-2.0
145,691	+		MMJJ_RS00760	0.89	+4.2
145,729	+				+1.0
145,729	+				-0.1
145,754	-				-0.5
145,755	+				-2.6
145,757	+				+4.0
145,760	-				+1.4
145,766	-				-0.3
145,769	+				-1.1
145,769	+				+3.2
145,772	+				-3.9
145,798	-				-0.3
145,856	-				+3.2
145,872	+				-1.9
145,909	+		MMJJ_RS00765	0.13	+2.7
145,930	-		MMJJ_RS00765	0.16	-0.0
145,931	+		MMJJ_RS00765	0.16	+1.1
145,973	-		MMJJ_RS00765	0.21	-4.0
145,974	+		MMJJ_RS00765	0.21	-0.4
146,059	-		MMJJ_RS00765	0.31	+3.2
146,059	-		MMJJ_RS00765	0.31	+0.7
146,059	-		MMJJ_RS00765	0.31	+2.6
146,059	-		MMJJ_RS00765	0.31	-0.5
146,064	-		MMJJ_RS00765	0.32	+1.7
146,064	-		MMJJ_RS00765	0.32	+1.7
146,065	+		MMJJ_RS00765	0.32	+1.0
146,070	-		MMJJ_RS00765	0.33	+3.5
146,070	-		MMJJ_RS00765	0.33	+0.6
146,079	+		MMJJ_RS00765	0.34	-3.3
146,153	+		MMJJ_RS00765	0.42	-2.8
146,169	-		MMJJ_RS00765	0.44	-2.9
146,170	+		MMJJ_RS00765	0.44	+1.2
146,171	-		MMJJ_RS00765	0.44	+2.8
146,171	-		MMJJ_RS00765	0.44	+0.3
146,171	-		MMJJ_RS00765	0.44	-3.5
146,171	-		MMJJ_RS00765	0.44	-2.1
146,171	-		MMJJ_RS00765	0.44	+1.9
146,171	-		MMJJ_RS00765	0.44	+2.3
146,171	-		MMJJ_RS00765	0.44	+0.3
146,172	+		MMJJ_RS00765	0.45	+3.7
146,172	+		MMJJ_RS00765	0.45	-1.7
146,172	+		MMJJ_RS00765	0.45	-4.1
146,172	+		MMJJ_RS00765	0.45	+1.2
146,172	+		MMJJ_RS00765	0.45	+0.5
146,172	+		MMJJ_RS00765	0.45	+0.7
146,172	+		MMJJ_RS00765	0.45	+2.2
146,172	+		MMJJ_RS00765	0.45	-3.5
146,172	+		MMJJ_RS00765	0.45	+2.0
146,173	-		MMJJ_RS00765	0.45	+0.7
146,174	+		MMJJ_RS00765	0.45	+2.1
146,182	+		MMJJ_RS00765	0.46	+3.2
146,206	-		MMJJ_RS00765	0.49	+0.2
146,206	-		MMJJ_RS00765	0.49	+1.6
146,207	+		MMJJ_RS00765	0.49	+1.6
146,237	-		MMJJ_RS00765	0.52	+0.4
146,248	+		MMJJ_RS00765	0.54	+3.7
146,299	-		MMJJ_RS00765	0.60	-2.8
146,384	+		MMJJ_RS00765	0.70	-1.9
146,391	+		MMJJ_RS00765	0.70	-0.8
146,391	+		MMJJ_RS00765	0.70	+4.1
146,416	-		MMJJ_RS00765	0.73	-2.4
146,447	+		MMJJ_RS00765	0.77	-3.0
146,482	-		MMJJ_RS00765	0.81	+1.9
146,482	-		MMJJ_RS00765	0.81	+1.7
146,483	+		MMJJ_RS00765	0.81	+1.1
146,483	+				+1.3
146,483	+		MMJJ_RS00765	0.81	-2.1
146,483	+		MMJJ_RS00765	0.81	+2.8
146,489	+		MMJJ_RS00765	0.82	+4.5
146,535	-		MMJJ_RS00765	0.87	-4.4
146,535	-		MMJJ_RS00765	0.87	+0.9
146,536	+		MMJJ_RS00765	0.88	-2.7
146,536	+		MMJJ_RS00765	0.88	-2.7
146,551	-		MMJJ_RS00765	0.89	+1.4
146,552	+		MMJJ_RS00765	0.89	-0.1
146,552	+		MMJJ_RS00765	0.89	-0.6
146,558	-				+0.4
146,559	+				+1.4
146,563	-				-3.9
146,601	-				+0.3
146,601	-				-1.1
146,603	-				-4.4
146,604	+				+1.6
146,609	+				-1.4
146,609	+				-2.6
146,625	+				-0.7
146,661	-				-0.2
146,661	-				-0.1
146,661	-				+0.2
146,661	-				-1.3
146,661	-				+0.1
146,661	-				+1.5
146,662	+				+2.6
146,662	+				+0.0
146,662	+				-4.0
146,662	+				-2.7
146,662	+				+1.3
146,662	+				+1.9
146,663	-				-0.7
146,663	-				+2.0
146,663	-				+0.8
146,664	+				+3.0
146,664	+				-2.0
146,664	+				-0.4
146,667	-				+1.2
146,668	+				-0.7
146,668	+				-0.7
146,672	+				-3.6
146,700	-				+2.2
146,712	-				+1.1
146,713	+				+0.5
146,717	-				+1.7
146,718	+				-1.5
146,807	+				+0.1
146,810	-				+0.0
146,811	+				+1.1
146,813	-				-0.1
146,816	-				-2.3
146,838	-				+3.0
146,844	+				-1.3
146,844	+				-3.7
146,916	-				+2.4
146,962	+				-3.3
146,991	-				-3.5
146,991	-				+1.1
146,991	-				-2.3
146,991	-				+1.6
146,991	-				+2.7
146,991	-				+0.2
146,992	+				-0.4
146,992	+				-2.5
146,992	+				-1.5
146,992	+				-2.9
146,992	+				+0.0
146,992	+				+0.5
146,993	-				-2.2
146,993	-				+0.1
146,993	-				-1.6
146,993	-				-0.0
146,994	+				+1.0
146,994	+				-4.5
146,994	+				-0.7
146,995	-				+0.8
146,995	-				+1.5
146,995	-				-0.1
146,995	-				-3.0
146,996	+				-2.1
146,996	+				+0.1
146,996	+				-2.0
146,996	+				-2.2
146,996	+				+0.0
146,996	+				-2.7
146,996	+				+2.5
146,996	+				-0.1
147,023	-				-2.6
147,034	-				-1.3
147,035	+				-2.4
147,039	-				+2.8
147,039	-				-3.4
147,040	+				+1.2
147,040	+				-0.4
147,041	-				+0.4
147,041	-				+2.2
147,042	+				-0.3
147,042	+				-0.2
147,042	+				-2.9
147,042	+				+1.3
147,043	-				-0.6
147,043	-				-2.9
147,044	+				+3.6
147,044	+				+1.0
147,044	+				+1.8
147,044	+				+0.3
147,046	-				-0.0
147,047	+				+2.3
147,047	+				-1.2
147,047	+				-3.1
147,047	+				+2.0
147,047	+				+2.9
147,048	-				-0.2
147,048	-				+0.6
147,048	-				+2.1
147,048	-				+0.5
147,049	+				-3.3
147,049	+				-2.2
147,060	+				+1.0
147,076	-				+1.1
147,099	-				-2.2
147,099	-				+0.7
147,099	-				+2.9
147,099	-				+0.9
147,099	-				+1.5
147,100	+				-0.2
147,100	+				+0.5
147,100	+				+1.1
147,105	-				-2.1
147,105	-				+1.9
147,105	-				+0.5
147,105	-				-2.5
147,106	+				-2.5
147,109	+				-0.5
147,118	-				-0.8
147,118	-				+0.7
147,118	-				-0.2
147,118	-				+1.4
147,125	+				+0.1
147,130	+				-3.3
147,138	-				-0.3
147,138	-				-1.1
147,138	-				-2.6
147,139	+				+2.4
147,183	-				+1.7
147,184	+				-3.0
147,184	+				-0.6
147,187	-				+2.2
147,187	-				+1.4
147,187	-				+2.8
147,187	-				+0.0
147,187	-				-1.6
147,187	-				-0.6
147,188	+				+2.0
147,188	+				-2.6
147,188	+				-0.8
147,188	+				-1.2
147,202	-				-0.3
147,203	+				+1.1
147,203	+				-1.2
147,203	+				-0.8
147,203	+				+0.3
147,204	-				-0.1
147,204	-				+0.9
147,204	-				-0.2
147,204	-				+0.2
147,204	-				+1.7
147,204	-				-0.6
147,205	+				-2.7
147,205	+				+0.1
147,205	+				+0.7
147,205	+				-1.6
147,205	+				+5.2
147,206	-				+0.6
147,206	-				-2.5
147,206	-				-4.0
147,206	-				+0.5
147,207	+				+2.9
147,207	+				-1.5
147,207	+				-0.1
147,207	+				+1.9
147,227	+				-2.6
147,242	-				-2.1
147,248	-				-3.3
147,248	-				-2.2
147,248	-				+1.3
147,248	-				-1.3
147,248	-				-1.8
147,248	-				+2.3
147,249	+				+1.1
147,249	+				+1.3
147,249	+				-2.1
147,249	+				+1.6
147,249	+				+0.6
147,249	+				-2.8
147,252	-				+3.2
147,253	+				+0.1
147,262	-				+0.2
147,263	+				-2.6
147,267	-				+1.2
147,267	-				+1.7
147,267	-				-0.6
147,268	+				+1.0
147,268	+				-2.3
147,268	+				+2.5
147,268	+				-1.2
147,270	-				-2.9
147,270	-				-3.6
147,271	+				-4.4
147,273	-				+0.5
147,275	-				-0.3
147,294	-				-0.8
147,325	-				-0.4
147,325	-				+2.4
147,340	-				-0.6
147,341	+				-0.3
147,341	+				-0.8
147,342	-				-2.3
147,343	+				-2.2
147,361	-		MMJJ_RS00770	0.10	+1.8
147,362	+		MMJJ_RS00770	0.10	-1.6
147,447	-		MMJJ_RS00770	0.25	-0.4
147,448	+		MMJJ_RS00770	0.25	+0.9
147,494	+		MMJJ_RS00770	0.32	-1.2
147,496	+		MMJJ_RS00770	0.33	-1.2
147,498	-		MMJJ_RS00770	0.33	-0.6
147,498	-		MMJJ_RS00770	0.33	+0.6
147,499	+		MMJJ_RS00770	0.33	+1.1
147,499	+		MMJJ_RS00770	0.33	-0.9
147,520	+		MMJJ_RS00770	0.37	-2.1
147,548	+		MMJJ_RS00770	0.42	-2.5
147,550	+		MMJJ_RS00770	0.42	+1.0
147,554	+		MMJJ_RS00770	0.43	-3.2
147,554	+		MMJJ_RS00770	0.43	-0.8
147,567	-		MMJJ_RS00770	0.45	-2.8
147,567	-		MMJJ_RS00770	0.45	-2.8
147,568	+		MMJJ_RS00770	0.45	+1.5
147,574	-		MMJJ_RS00770	0.46	-0.5
147,575	+		MMJJ_RS00770	0.46	-2.5
147,578	-		MMJJ_RS00770	0.47	+1.6
147,578	-		MMJJ_RS00770	0.47	+3.6
147,579	+		MMJJ_RS00770	0.47	+1.0
147,579	+		MMJJ_RS00770	0.47	-2.0
147,579	+		MMJJ_RS00770	0.47	+0.5
147,579	+		MMJJ_RS00770	0.47	-2.6
147,590	-		MMJJ_RS00770	0.49	+0.3
147,590	-		MMJJ_RS00770	0.49	+1.5
147,590	-		MMJJ_RS00770	0.49	+2.6
147,608	+		MMJJ_RS00770	0.52	-1.8
147,608	+				+1.2
147,618	+		MMJJ_RS00770	0.53	-4.7
147,618	+		MMJJ_RS00770	0.53	-3.1
147,618	+		MMJJ_RS00770	0.53	+0.7