Experiment: 0.1X LB plate, Mixed culture; Streptomyces sp. SAI_126 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_04118 and MPMX20_04119 are separated by 111 nucleotides MPMX20_04119 and MPMX20_04120 overlap by 1 nucleotides
MPMX20_04118: MPMX20_04118 - Cytosol aminopeptidase, at 4,310,902 to 4,312,413
_04118
MPMX20_04119: MPMX20_04119 - DNA polymerase III subunit chi, at 4,312,525 to 4,312,968
_04119
MPMX20_04120: MPMX20_04120 - Valine--tRNA ligase, at 4,312,968 to 4,315,823
_04120
Position (kb)
4312
4313 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4311.545 kb on - strand, within MPMX20_04118 at 4311.660 kb on + strand, within MPMX20_04118 at 4311.665 kb on + strand, within MPMX20_04118 at 4311.680 kb on - strand, within MPMX20_04118 at 4311.705 kb on + strand, within MPMX20_04118 at 4311.711 kb on + strand, within MPMX20_04118 at 4311.758 kb on + strand, within MPMX20_04118 at 4311.796 kb on + strand, within MPMX20_04118 at 4311.835 kb on - strand, within MPMX20_04118 at 4311.869 kb on - strand, within MPMX20_04118 at 4311.876 kb on + strand, within MPMX20_04118 at 4311.935 kb on + strand, within MPMX20_04118 at 4311.945 kb on + strand, within MPMX20_04118 at 4311.951 kb on - strand, within MPMX20_04118 at 4311.966 kb on - strand, within MPMX20_04118 at 4311.976 kb on - strand, within MPMX20_04118 at 4311.985 kb on + strand, within MPMX20_04118 at 4311.990 kb on + strand, within MPMX20_04118 at 4311.998 kb on - strand, within MPMX20_04118 at 4312.010 kb on + strand, within MPMX20_04118 at 4312.021 kb on + strand, within MPMX20_04118 at 4312.095 kb on + strand, within MPMX20_04118 at 4312.095 kb on + strand, within MPMX20_04118 at 4312.155 kb on + strand, within MPMX20_04118 at 4312.161 kb on + strand, within MPMX20_04118 at 4312.169 kb on - strand, within MPMX20_04118 at 4312.169 kb on - strand, within MPMX20_04118 at 4312.210 kb on + strand, within MPMX20_04118 at 4312.226 kb on - strand, within MPMX20_04118 at 4312.281 kb on + strand at 4312.302 kb on - strand at 4312.332 kb on + strand at 4312.332 kb on + strand at 4312.332 kb on + strand at 4312.340 kb on - strand at 4312.401 kb on - strand at 4312.442 kb on - strand at 4312.444 kb on + strand at 4312.546 kb on + strand at 4312.547 kb on - strand at 4312.547 kb on - strand at 4312.593 kb on - strand, within MPMX20_04119 at 4312.630 kb on + strand, within MPMX20_04119 at 4312.638 kb on - strand, within MPMX20_04119 at 4312.712 kb on + strand, within MPMX20_04119 at 4312.735 kb on + strand, within MPMX20_04119 at 4312.769 kb on - strand, within MPMX20_04119 at 4312.807 kb on + strand, within MPMX20_04119
Per-strain Table
Position Strand Gene LocusTag Fraction 0.1X LB plate, Mixed culture; Streptomyces sp. SAI_126 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct remove 4,311,545 - MPMX20_04118 0.43 -0.3 4,311,660 + MPMX20_04118 0.50 -0.1 4,311,665 + MPMX20_04118 0.50 -1.8 4,311,680 - MPMX20_04118 0.51 -0.1 4,311,705 + MPMX20_04118 0.53 -1.4 4,311,711 + MPMX20_04118 0.54 -0.1 4,311,758 + MPMX20_04118 0.57 -0.7 4,311,796 + MPMX20_04118 0.59 -1.2 4,311,835 - MPMX20_04118 0.62 -1.9 4,311,869 - MPMX20_04118 0.64 +0.6 4,311,876 + MPMX20_04118 0.64 -1.6 4,311,935 + MPMX20_04118 0.68 -0.2 4,311,945 + MPMX20_04118 0.69 -0.2 4,311,951 - MPMX20_04118 0.69 -0.5 4,311,966 - MPMX20_04118 0.70 -0.6 4,311,976 - MPMX20_04118 0.71 -0.7 4,311,985 + MPMX20_04118 0.72 -0.3 4,311,990 + MPMX20_04118 0.72 -1.5 4,311,998 - MPMX20_04118 0.72 -1.8 4,312,010 + MPMX20_04118 0.73 -0.6 4,312,021 + MPMX20_04118 0.74 -1.1 4,312,095 + MPMX20_04118 0.79 -0.8 4,312,095 + MPMX20_04118 0.79 +0.8 4,312,155 + MPMX20_04118 0.83 -0.9 4,312,161 + MPMX20_04118 0.83 +2.1 4,312,169 - MPMX20_04118 0.84 +0.0 4,312,169 - MPMX20_04118 0.84 -0.5 4,312,210 + MPMX20_04118 0.87 +0.5 4,312,226 - MPMX20_04118 0.88 -1.2 4,312,281 + -1.1 4,312,302 - -0.3 4,312,332 + -0.2 4,312,332 + -0.5 4,312,332 + +0.1 4,312,340 - -3.1 4,312,401 - +2.0 4,312,442 - -0.3 4,312,444 + -0.1 4,312,546 + -0.5 4,312,547 - +1.5 4,312,547 - -0.5 4,312,593 - MPMX20_04119 0.15 +0.5 4,312,630 + MPMX20_04119 0.24 -0.5 4,312,638 - MPMX20_04119 0.25 -0.1 4,312,712 + MPMX20_04119 0.42 -1.9 4,312,735 + MPMX20_04119 0.47 -2.7 4,312,769 - MPMX20_04119 0.55 +0.5 4,312,807 + MPMX20_04119 0.64 +1.5
Or see this region's nucleotide sequence