Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03174

Experiment: 0.1X LB plate, Mixed culture; Streptomyces sp. SAI_126 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03173 and MPMX20_03174 are separated by 72 nucleotidesMPMX20_03174 and MPMX20_03175 are separated by 113 nucleotides MPMX20_03173: MPMX20_03173 - Bifunctional transcriptional activator/DNA repair enzyme Ada, at 3,332,953 to 3,334,011 _03173 MPMX20_03174: MPMX20_03174 - FAD:protein FMN transferase, at 3,334,084 to 3,335,139 _03174 MPMX20_03175: MPMX20_03175 - Outer membrane porin C, at 3,335,253 to 3,336,368 _03175 Position (kb) 3334 3335 3336Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4 5 6at 3333.140 kb on + strand, within MPMX20_03173at 3333.201 kb on + strand, within MPMX20_03173at 3333.246 kb on + strand, within MPMX20_03173at 3333.396 kb on - strand, within MPMX20_03173at 3333.485 kb on + strand, within MPMX20_03173at 3333.500 kb on + strand, within MPMX20_03173at 3333.576 kb on + strand, within MPMX20_03173at 3333.616 kb on + strand, within MPMX20_03173at 3333.745 kb on - strand, within MPMX20_03173at 3333.819 kb on - strand, within MPMX20_03173at 3333.819 kb on - strand, within MPMX20_03173at 3333.842 kb on - strand, within MPMX20_03173at 3333.845 kb on + strand, within MPMX20_03173at 3334.030 kb on + strandat 3334.101 kb on + strandat 3334.109 kb on - strandat 3334.125 kb on + strandat 3334.206 kb on + strand, within MPMX20_03174at 3334.312 kb on + strand, within MPMX20_03174at 3334.583 kb on + strand, within MPMX20_03174at 3334.583 kb on + strand, within MPMX20_03174at 3334.583 kb on + strand, within MPMX20_03174at 3334.663 kb on + strand, within MPMX20_03174at 3334.671 kb on - strand, within MPMX20_03174at 3334.671 kb on - strand, within MPMX20_03174at 3334.739 kb on + strand, within MPMX20_03174at 3334.851 kb on + strand, within MPMX20_03174at 3334.864 kb on + strand, within MPMX20_03174at 3334.872 kb on + strand, within MPMX20_03174at 3334.872 kb on + strand, within MPMX20_03174at 3334.880 kb on - strand, within MPMX20_03174at 3334.881 kb on - strand, within MPMX20_03174at 3334.882 kb on + strand, within MPMX20_03174at 3334.882 kb on + strand, within MPMX20_03174at 3334.928 kb on + strand, within MPMX20_03174at 3335.074 kb on - strandat 3335.150 kb on + strandat 3335.150 kb on + strandat 3335.195 kb on + strandat 3335.251 kb on + strandat 3335.274 kb on - strandat 3335.274 kb on - strandat 3335.283 kb on + strandat 3335.295 kb on + strandat 3335.348 kb on + strandat 3335.353 kb on + strandat 3335.404 kb on + strand, within MPMX20_03175at 3335.424 kb on + strand, within MPMX20_03175at 3335.447 kb on - strand, within MPMX20_03175at 3335.447 kb on - strand, within MPMX20_03175at 3335.447 kb on - strand, within MPMX20_03175at 3335.447 kb on - strand, within MPMX20_03175at 3335.447 kb on - strand, within MPMX20_03175at 3335.447 kb on - strand, within MPMX20_03175at 3335.447 kb on - strand, within MPMX20_03175at 3335.459 kb on - strand, within MPMX20_03175at 3335.499 kb on - strand, within MPMX20_03175at 3335.504 kb on - strand, within MPMX20_03175at 3335.504 kb on - strand, within MPMX20_03175at 3335.538 kb on + strand, within MPMX20_03175at 3335.546 kb on - strand, within MPMX20_03175at 3335.557 kb on + strand, within MPMX20_03175at 3335.581 kb on + strand, within MPMX20_03175at 3335.598 kb on + strand, within MPMX20_03175at 3335.619 kb on - strand, within MPMX20_03175at 3335.619 kb on - strand, within MPMX20_03175at 3335.619 kb on - strand, within MPMX20_03175at 3335.647 kb on + strand, within MPMX20_03175at 3335.695 kb on - strand, within MPMX20_03175at 3335.705 kb on + strand, within MPMX20_03175at 3335.705 kb on + strand, within MPMX20_03175at 3335.708 kb on - strand, within MPMX20_03175at 3335.770 kb on - strand, within MPMX20_03175at 3335.786 kb on + strand, within MPMX20_03175at 3335.788 kb on + strand, within MPMX20_03175at 3335.794 kb on - strand, within MPMX20_03175at 3335.801 kb on + strand, within MPMX20_03175at 3335.801 kb on + strand, within MPMX20_03175at 3335.809 kb on - strand, within MPMX20_03175at 3335.809 kb on - strand, within MPMX20_03175at 3335.809 kb on - strand, within MPMX20_03175at 3335.809 kb on - strand, within MPMX20_03175at 3335.809 kb on - strand, within MPMX20_03175at 3335.856 kb on - strand, within MPMX20_03175at 3335.899 kb on - strand, within MPMX20_03175at 3335.899 kb on - strand, within MPMX20_03175at 3336.003 kb on - strand, within MPMX20_03175at 3336.005 kb on - strand, within MPMX20_03175at 3336.030 kb on - strand, within MPMX20_03175at 3336.078 kb on + strand, within MPMX20_03175at 3336.078 kb on + strand, within MPMX20_03175at 3336.086 kb on - strand, within MPMX20_03175at 3336.086 kb on - strand, within MPMX20_03175at 3336.086 kb on - strand, within MPMX20_03175at 3336.086 kb on - strand, within MPMX20_03175at 3336.088 kb on + strand, within MPMX20_03175at 3336.095 kb on - strand, within MPMX20_03175at 3336.096 kb on - strand, within MPMX20_03175at 3336.096 kb on - strand, within MPMX20_03175at 3336.096 kb on - strand, within MPMX20_03175at 3336.098 kb on + strand, within MPMX20_03175at 3336.107 kb on + strand, within MPMX20_03175at 3336.115 kb on + strand, within MPMX20_03175at 3336.115 kb on + strand, within MPMX20_03175at 3336.115 kb on - strand, within MPMX20_03175at 3336.138 kb on + strand, within MPMX20_03175at 3336.138 kb on - strand, within MPMX20_03175

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Per-strain Table

Position Strand Gene LocusTag Fraction 0.1X LB plate, Mixed culture; Streptomyces sp. SAI_126 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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3,333,140 + MPMX20_03173 0.18 +0.1
3,333,201 + MPMX20_03173 0.23 -1.5
3,333,246 + MPMX20_03173 0.28 -0.0
3,333,396 - MPMX20_03173 0.42 -2.9
3,333,485 + MPMX20_03173 0.50 +1.0
3,333,500 + MPMX20_03173 0.52 +0.5
3,333,576 + MPMX20_03173 0.59 +0.4
3,333,616 + MPMX20_03173 0.63 +0.1
3,333,745 - MPMX20_03173 0.75 -1.5
3,333,819 - MPMX20_03173 0.82 +1.1
3,333,819 - MPMX20_03173 0.82 -1.9
3,333,842 - MPMX20_03173 0.84 +0.4
3,333,845 + MPMX20_03173 0.84 +0.3
3,334,030 + -1.3
3,334,101 + -0.5
3,334,109 - -0.9
3,334,125 + -1.2
3,334,206 + MPMX20_03174 0.12 -2.7
3,334,312 + MPMX20_03174 0.22 -2.7
3,334,583 + MPMX20_03174 0.47 -2.5
3,334,583 + MPMX20_03174 0.47 +0.4
3,334,583 + MPMX20_03174 0.47 -0.5
3,334,663 + MPMX20_03174 0.55 +0.8
3,334,671 - MPMX20_03174 0.56 -1.5
3,334,671 - MPMX20_03174 0.56 -1.6
3,334,739 + MPMX20_03174 0.62 -1.9
3,334,851 + MPMX20_03174 0.73 +1.8
3,334,864 + MPMX20_03174 0.74 +0.2
3,334,872 + MPMX20_03174 0.75 -3.4
3,334,872 + MPMX20_03174 0.75 -1.3
3,334,880 - MPMX20_03174 0.75 -2.1
3,334,881 - MPMX20_03174 0.75 -1.0
3,334,882 + MPMX20_03174 0.76 -0.2
3,334,882 + MPMX20_03174 0.76 -0.8
3,334,928 + MPMX20_03174 0.80 -2.0
3,335,074 - +1.2
3,335,150 + +2.5
3,335,150 + +1.2
3,335,195 + +0.2
3,335,251 + -0.1
3,335,274 - +0.0
3,335,274 - -1.2
3,335,283 + +1.4
3,335,295 + -0.2
3,335,348 + -1.0
3,335,353 + +0.4
3,335,404 + MPMX20_03175 0.14 -0.2
3,335,424 + MPMX20_03175 0.15 +0.6
3,335,447 - MPMX20_03175 0.17 -0.8
3,335,447 - MPMX20_03175 0.17 +1.4
3,335,447 - MPMX20_03175 0.17 +0.2
3,335,447 - MPMX20_03175 0.17 -0.8
3,335,447 - MPMX20_03175 0.17 -0.5
3,335,447 - MPMX20_03175 0.17 -1.2
3,335,447 - MPMX20_03175 0.17 +0.6
3,335,459 - MPMX20_03175 0.18 -1.7
3,335,499 - MPMX20_03175 0.22 -1.8
3,335,504 - MPMX20_03175 0.22 -1.3
3,335,504 - MPMX20_03175 0.22 +0.4
3,335,538 + MPMX20_03175 0.26 +0.5
3,335,546 - MPMX20_03175 0.26 -0.1
3,335,557 + MPMX20_03175 0.27 -1.1
3,335,581 + MPMX20_03175 0.29 -0.2
3,335,598 + MPMX20_03175 0.31 -2.0
3,335,619 - MPMX20_03175 0.33 -1.7
3,335,619 - MPMX20_03175 0.33 -1.6
3,335,619 - MPMX20_03175 0.33 -0.8
3,335,647 + MPMX20_03175 0.35 -1.5
3,335,695 - MPMX20_03175 0.40 -0.1
3,335,705 + MPMX20_03175 0.41 -0.4
3,335,705 + MPMX20_03175 0.41 +0.2
3,335,708 - MPMX20_03175 0.41 -1.4
3,335,770 - MPMX20_03175 0.46 -0.3
3,335,786 + MPMX20_03175 0.48 -0.2
3,335,788 + MPMX20_03175 0.48 -0.0
3,335,794 - MPMX20_03175 0.48 +0.4
3,335,801 + MPMX20_03175 0.49 +1.8
3,335,801 + MPMX20_03175 0.49 -1.5
3,335,809 - MPMX20_03175 0.50 +1.5
3,335,809 - MPMX20_03175 0.50 +0.2
3,335,809 - MPMX20_03175 0.50 -1.9
3,335,809 - MPMX20_03175 0.50 +0.9
3,335,809 - MPMX20_03175 0.50 -0.5
3,335,856 - MPMX20_03175 0.54 +0.9
3,335,899 - MPMX20_03175 0.58 -0.8
3,335,899 - MPMX20_03175 0.58 -1.2
3,336,003 - MPMX20_03175 0.67 -0.5
3,336,005 - MPMX20_03175 0.67 -0.2
3,336,030 - MPMX20_03175 0.70 -1.1
3,336,078 + MPMX20_03175 0.74 -0.8
3,336,078 + MPMX20_03175 0.74 -1.1
3,336,086 - MPMX20_03175 0.75 -1.3
3,336,086 - MPMX20_03175 0.75 +0.1
3,336,086 - MPMX20_03175 0.75 -0.0
3,336,086 - MPMX20_03175 0.75 -0.2
3,336,088 + MPMX20_03175 0.75 -0.1
3,336,095 - MPMX20_03175 0.75 +1.2
3,336,096 - MPMX20_03175 0.76 -0.4
3,336,096 - MPMX20_03175 0.76 +2.0
3,336,096 - MPMX20_03175 0.76 -1.4
3,336,098 + MPMX20_03175 0.76 -1.5
3,336,107 + MPMX20_03175 0.77 +0.8
3,336,115 + MPMX20_03175 0.77 -0.8
3,336,115 + MPMX20_03175 0.77 -0.3
3,336,115 - MPMX20_03175 0.77 +1.8
3,336,138 + MPMX20_03175 0.79 +5.9
3,336,138 - MPMX20_03175 0.79 -0.2

Or see this region's nucleotide sequence