Experiment: 0.1X LB plate, Mixed culture; Streptomyces sp. SAI_126 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_03152 and MPMX20_03153 are separated by 134 nucleotides MPMX20_03153 and MPMX20_03154 are separated by 19 nucleotides
MPMX20_03152: MPMX20_03152 - Nucleoid-associated protein YejK, at 3,314,293 to 3,315,300
_03152
MPMX20_03153: MPMX20_03153 - hypothetical protein, at 3,315,435 to 3,315,662
_03153
MPMX20_03154: MPMX20_03154 - Inner membrane protein YejM, at 3,315,682 to 3,317,442
_03154
Position (kb)
3315
3316 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 3314.506 kb on + strand, within MPMX20_03152 at 3314.549 kb on - strand, within MPMX20_03152 at 3314.618 kb on + strand, within MPMX20_03152 at 3314.618 kb on + strand, within MPMX20_03152 at 3314.618 kb on + strand, within MPMX20_03152 at 3314.618 kb on + strand, within MPMX20_03152 at 3314.626 kb on - strand, within MPMX20_03152 at 3314.626 kb on - strand, within MPMX20_03152 at 3314.626 kb on - strand, within MPMX20_03152 at 3314.702 kb on + strand, within MPMX20_03152 at 3314.707 kb on + strand, within MPMX20_03152 at 3314.769 kb on + strand, within MPMX20_03152 at 3314.797 kb on + strand, within MPMX20_03152 at 3314.798 kb on + strand, within MPMX20_03152 at 3314.901 kb on - strand, within MPMX20_03152 at 3314.950 kb on - strand, within MPMX20_03152 at 3314.956 kb on + strand, within MPMX20_03152 at 3314.999 kb on - strand, within MPMX20_03152 at 3315.104 kb on + strand, within MPMX20_03152 at 3315.127 kb on + strand, within MPMX20_03152 at 3315.133 kb on - strand, within MPMX20_03152 at 3315.138 kb on - strand, within MPMX20_03152 at 3315.166 kb on - strand, within MPMX20_03152 at 3315.166 kb on - strand, within MPMX20_03152 at 3315.168 kb on - strand, within MPMX20_03152 at 3315.234 kb on + strand at 3315.242 kb on - strand at 3315.242 kb on - strand at 3315.242 kb on - strand at 3315.242 kb on - strand at 3315.249 kb on - strand at 3315.457 kb on + strand at 3315.491 kb on + strand, within MPMX20_03153 at 3315.624 kb on + strand, within MPMX20_03153 at 3315.624 kb on + strand, within MPMX20_03153 at 3315.677 kb on + strand at 3316.389 kb on + strand, within MPMX20_03154 at 3316.389 kb on + strand, within MPMX20_03154 at 3316.389 kb on + strand, within MPMX20_03154 at 3316.389 kb on + strand, within MPMX20_03154 at 3316.404 kb on + strand, within MPMX20_03154 at 3316.501 kb on + strand, within MPMX20_03154 at 3316.563 kb on + strand, within MPMX20_03154 at 3316.563 kb on + strand, within MPMX20_03154 at 3316.563 kb on + strand, within MPMX20_03154 at 3316.563 kb on + strand, within MPMX20_03154 at 3316.571 kb on - strand, within MPMX20_03154 at 3316.632 kb on + strand, within MPMX20_03154 at 3316.640 kb on - strand, within MPMX20_03154
Per-strain Table
Position Strand Gene LocusTag Fraction 0.1X LB plate, Mixed culture; Streptomyces sp. SAI_126 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct remove 3,314,506 + MPMX20_03152 0.21 -1.5 3,314,549 - MPMX20_03152 0.25 -3.1 3,314,618 + MPMX20_03152 0.32 -1.9 3,314,618 + MPMX20_03152 0.32 +0.6 3,314,618 + MPMX20_03152 0.32 -0.2 3,314,618 + MPMX20_03152 0.32 +0.5 3,314,626 - MPMX20_03152 0.33 +0.2 3,314,626 - MPMX20_03152 0.33 -0.6 3,314,626 - MPMX20_03152 0.33 +0.0 3,314,702 + MPMX20_03152 0.41 -2.2 3,314,707 + MPMX20_03152 0.41 +0.2 3,314,769 + MPMX20_03152 0.47 +1.3 3,314,797 + MPMX20_03152 0.50 -0.3 3,314,798 + MPMX20_03152 0.50 -0.5 3,314,901 - MPMX20_03152 0.60 -0.6 3,314,950 - MPMX20_03152 0.65 -1.5 3,314,956 + MPMX20_03152 0.66 +0.2 3,314,999 - MPMX20_03152 0.70 -1.0 3,315,104 + MPMX20_03152 0.80 +0.5 3,315,127 + MPMX20_03152 0.83 -1.2 3,315,133 - MPMX20_03152 0.83 -1.7 3,315,138 - MPMX20_03152 0.84 -1.0 3,315,166 - MPMX20_03152 0.87 +0.4 3,315,166 - MPMX20_03152 0.87 -0.5 3,315,168 - MPMX20_03152 0.87 +0.2 3,315,234 + -0.2 3,315,242 - -1.8 3,315,242 - +0.3 3,315,242 - +1.7 3,315,242 - -0.3 3,315,249 - -0.4 3,315,457 + +1.8 3,315,491 + MPMX20_03153 0.25 -1.4 3,315,624 + MPMX20_03153 0.83 -3.0 3,315,624 + MPMX20_03153 0.83 +0.2 3,315,677 + -0.8 3,316,389 + MPMX20_03154 0.40 -4.4 3,316,389 + MPMX20_03154 0.40 -4.5 3,316,389 + MPMX20_03154 0.40 -2.7 3,316,389 + MPMX20_03154 0.40 -0.3 3,316,404 + MPMX20_03154 0.41 -1.6 3,316,501 + MPMX20_03154 0.47 -1.5 3,316,563 + MPMX20_03154 0.50 -4.0 3,316,563 + MPMX20_03154 0.50 -2.2 3,316,563 + MPMX20_03154 0.50 -3.3 3,316,563 + MPMX20_03154 0.50 -2.1 3,316,571 - MPMX20_03154 0.50 -0.3 3,316,632 + MPMX20_03154 0.54 -3.1 3,316,640 - MPMX20_03154 0.54 -1.5
Or see this region's nucleotide sequence