Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02886

Experiment: 0.1X LB plate, Mixed culture; Streptomyces sp. SAI_126 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02884 and MPMX20_02885 are separated by 11 nucleotidesMPMX20_02885 and MPMX20_02886 are separated by 3 nucleotidesMPMX20_02886 and MPMX20_02887 are separated by 12 nucleotidesMPMX20_02887 and MPMX20_02888 are separated by 50 nucleotidesMPMX20_02888 and MPMX20_02889 are separated by 25 nucleotides MPMX20_02884: MPMX20_02884 - hypothetical protein, at 3,035,013 to 3,036,098 _02884 MPMX20_02885: MPMX20_02885 - hypothetical protein, at 3,036,110 to 3,036,541 _02885 MPMX20_02886: MPMX20_02886 - hypothetical protein, at 3,036,545 to 3,037,942 _02886 MPMX20_02887: MPMX20_02887 - hypothetical protein, at 3,037,955 to 3,038,128 _02887 MPMX20_02888: MPMX20_02888 - hypothetical protein, at 3,038,179 to 3,038,451 _02888 MPMX20_02889: MPMX20_02889 - hypothetical protein, at 3,038,477 to 3,039,379 _02889 Position (kb) 3036 3037 3038Strain fitness (log2 ratio) -5 -4 -3 -2 -1 0 1 2at 3035.551 kb on + strand, within MPMX20_02884at 3035.585 kb on + strand, within MPMX20_02884at 3035.599 kb on - strand, within MPMX20_02884at 3035.630 kb on - strand, within MPMX20_02884at 3035.635 kb on - strand, within MPMX20_02884at 3035.687 kb on - strand, within MPMX20_02884at 3035.702 kb on + strand, within MPMX20_02884at 3035.734 kb on + strand, within MPMX20_02884at 3035.793 kb on + strand, within MPMX20_02884at 3035.852 kb on + strand, within MPMX20_02884at 3035.879 kb on + strand, within MPMX20_02884at 3035.989 kb on + strand, within MPMX20_02884at 3035.989 kb on + strand, within MPMX20_02884at 3035.997 kb on - strandat 3036.046 kb on - strandat 3036.049 kb on + strandat 3036.081 kb on - strandat 3036.103 kb on - strandat 3036.149 kb on + strandat 3036.149 kb on + strandat 3036.157 kb on - strand, within MPMX20_02885at 3036.190 kb on + strand, within MPMX20_02885at 3036.204 kb on + strand, within MPMX20_02885at 3036.227 kb on + strand, within MPMX20_02885at 3036.227 kb on + strand, within MPMX20_02885at 3036.227 kb on + strand, within MPMX20_02885at 3036.227 kb on + strand, within MPMX20_02885at 3036.227 kb on + strand, within MPMX20_02885at 3036.235 kb on - strand, within MPMX20_02885at 3036.235 kb on - strand, within MPMX20_02885at 3036.287 kb on - strand, within MPMX20_02885at 3036.315 kb on - strand, within MPMX20_02885at 3036.315 kb on - strand, within MPMX20_02885at 3036.480 kb on - strand, within MPMX20_02885at 3036.607 kb on + strandat 3036.610 kb on - strandat 3036.615 kb on - strandat 3036.615 kb on - strandat 3036.615 kb on - strandat 3036.626 kb on - strandat 3036.626 kb on - strandat 3036.677 kb on + strandat 3036.684 kb on + strandat 3036.760 kb on - strand, within MPMX20_02886at 3036.767 kb on + strand, within MPMX20_02886at 3036.825 kb on + strand, within MPMX20_02886at 3036.826 kb on - strand, within MPMX20_02886at 3036.964 kb on - strand, within MPMX20_02886at 3037.083 kb on + strand, within MPMX20_02886at 3037.091 kb on - strand, within MPMX20_02886at 3037.141 kb on + strand, within MPMX20_02886at 3037.149 kb on - strand, within MPMX20_02886at 3037.149 kb on - strand, within MPMX20_02886at 3037.304 kb on + strand, within MPMX20_02886at 3037.337 kb on - strand, within MPMX20_02886at 3037.350 kb on - strand, within MPMX20_02886at 3037.368 kb on + strand, within MPMX20_02886at 3037.435 kb on - strand, within MPMX20_02886at 3037.517 kb on + strand, within MPMX20_02886at 3037.536 kb on - strand, within MPMX20_02886at 3037.555 kb on + strand, within MPMX20_02886at 3037.747 kb on - strand, within MPMX20_02886at 3037.761 kb on - strand, within MPMX20_02886at 3037.770 kb on + strand, within MPMX20_02886at 3037.770 kb on + strand, within MPMX20_02886at 3037.778 kb on - strand, within MPMX20_02886at 3037.805 kb on - strandat 3037.857 kb on + strandat 3037.921 kb on + strandat 3037.921 kb on - strandat 3037.929 kb on - strandat 3038.035 kb on + strand, within MPMX20_02887at 3038.049 kb on - strand, within MPMX20_02887at 3038.071 kb on + strand, within MPMX20_02887at 3038.071 kb on + strand, within MPMX20_02887at 3038.076 kb on + strand, within MPMX20_02887at 3038.087 kb on + strand, within MPMX20_02887at 3038.156 kb on + strandat 3038.235 kb on - strand, within MPMX20_02888at 3038.242 kb on + strand, within MPMX20_02888at 3038.314 kb on + strand, within MPMX20_02888at 3038.327 kb on + strand, within MPMX20_02888at 3038.362 kb on + strand, within MPMX20_02888at 3038.362 kb on + strand, within MPMX20_02888at 3038.369 kb on + strand, within MPMX20_02888at 3038.369 kb on + strand, within MPMX20_02888at 3038.370 kb on - strand, within MPMX20_02888at 3038.370 kb on - strand, within MPMX20_02888at 3038.397 kb on - strand, within MPMX20_02888at 3038.399 kb on + strand, within MPMX20_02888at 3038.407 kb on + strand, within MPMX20_02888at 3038.567 kb on - strandat 3038.594 kb on + strand, within MPMX20_02889at 3038.595 kb on + strand, within MPMX20_02889at 3038.624 kb on - strand, within MPMX20_02889at 3038.624 kb on - strand, within MPMX20_02889at 3038.632 kb on + strand, within MPMX20_02889at 3038.640 kb on - strand, within MPMX20_02889at 3038.643 kb on + strand, within MPMX20_02889at 3038.643 kb on + strand, within MPMX20_02889at 3038.643 kb on + strand, within MPMX20_02889at 3038.643 kb on + strand, within MPMX20_02889at 3038.643 kb on + strand, within MPMX20_02889at 3038.650 kb on - strand, within MPMX20_02889at 3038.650 kb on - strand, within MPMX20_02889at 3038.650 kb on - strand, within MPMX20_02889at 3038.651 kb on - strand, within MPMX20_02889at 3038.651 kb on - strand, within MPMX20_02889at 3038.651 kb on - strand, within MPMX20_02889at 3038.651 kb on - strand, within MPMX20_02889at 3038.651 kb on - strand, within MPMX20_02889at 3038.651 kb on - strand, within MPMX20_02889at 3038.651 kb on - strand, within MPMX20_02889at 3038.702 kb on + strand, within MPMX20_02889at 3038.725 kb on + strand, within MPMX20_02889at 3038.732 kb on + strand, within MPMX20_02889at 3038.733 kb on - strand, within MPMX20_02889at 3038.740 kb on - strand, within MPMX20_02889at 3038.778 kb on + strand, within MPMX20_02889at 3038.778 kb on + strand, within MPMX20_02889at 3038.783 kb on + strand, within MPMX20_02889at 3038.786 kb on - strand, within MPMX20_02889at 3038.786 kb on - strand, within MPMX20_02889at 3038.802 kb on + strand, within MPMX20_02889at 3038.805 kb on + strand, within MPMX20_02889at 3038.805 kb on - strand, within MPMX20_02889at 3038.866 kb on + strand, within MPMX20_02889

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Per-strain Table

Position Strand Gene LocusTag Fraction 0.1X LB plate, Mixed culture; Streptomyces sp. SAI_126 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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3,035,551 + MPMX20_02884 0.50 -1.6
3,035,585 + MPMX20_02884 0.53 +1.8
3,035,599 - MPMX20_02884 0.54 -2.3
3,035,630 - MPMX20_02884 0.57 -0.8
3,035,635 - MPMX20_02884 0.57 -1.5
3,035,687 - MPMX20_02884 0.62 -1.5
3,035,702 + MPMX20_02884 0.63 -1.6
3,035,734 + MPMX20_02884 0.66 -2.0
3,035,793 + MPMX20_02884 0.72 -2.9
3,035,852 + MPMX20_02884 0.77 -2.9
3,035,879 + MPMX20_02884 0.80 -2.1
3,035,989 + MPMX20_02884 0.90 -2.1
3,035,989 + MPMX20_02884 0.90 -1.6
3,035,997 - -1.5
3,036,046 - -3.1
3,036,049 + -1.2
3,036,081 - -1.6
3,036,103 - -1.2
3,036,149 + -1.7
3,036,149 + -1.8
3,036,157 - MPMX20_02885 0.11 -1.2
3,036,190 + MPMX20_02885 0.19 -2.6
3,036,204 + MPMX20_02885 0.22 -2.2
3,036,227 + MPMX20_02885 0.27 -3.1
3,036,227 + MPMX20_02885 0.27 -0.8
3,036,227 + MPMX20_02885 0.27 -1.7
3,036,227 + MPMX20_02885 0.27 -2.2
3,036,227 + MPMX20_02885 0.27 -1.7
3,036,235 - MPMX20_02885 0.29 -2.2
3,036,235 - MPMX20_02885 0.29 -2.5
3,036,287 - MPMX20_02885 0.41 -2.2
3,036,315 - MPMX20_02885 0.47 -3.2
3,036,315 - MPMX20_02885 0.47 -1.7
3,036,480 - MPMX20_02885 0.86 -1.2
3,036,607 + -2.1
3,036,610 - -1.1
3,036,615 - -1.0
3,036,615 - -1.4
3,036,615 - -1.4
3,036,626 - -1.8
3,036,626 - -1.3
3,036,677 + -1.6
3,036,684 + -0.6
3,036,760 - MPMX20_02886 0.15 -2.9
3,036,767 + MPMX20_02886 0.16 -0.4
3,036,825 + MPMX20_02886 0.20 -2.0
3,036,826 - MPMX20_02886 0.20 -1.3
3,036,964 - MPMX20_02886 0.30 -1.6
3,037,083 + MPMX20_02886 0.38 -1.1
3,037,091 - MPMX20_02886 0.39 -1.7
3,037,141 + MPMX20_02886 0.43 -1.5
3,037,149 - MPMX20_02886 0.43 -2.1
3,037,149 - MPMX20_02886 0.43 -2.5
3,037,304 + MPMX20_02886 0.54 -1.4
3,037,337 - MPMX20_02886 0.57 -1.3
3,037,350 - MPMX20_02886 0.58 -0.1
3,037,368 + MPMX20_02886 0.59 -1.6
3,037,435 - MPMX20_02886 0.64 -1.4
3,037,517 + MPMX20_02886 0.70 -1.2
3,037,536 - MPMX20_02886 0.71 -1.3
3,037,555 + MPMX20_02886 0.72 -0.8
3,037,747 - MPMX20_02886 0.86 +1.5
3,037,761 - MPMX20_02886 0.87 +2.0
3,037,770 + MPMX20_02886 0.88 -1.5
3,037,770 + MPMX20_02886 0.88 -0.9
3,037,778 - MPMX20_02886 0.88 -2.8
3,037,805 - -1.4
3,037,857 + -1.2
3,037,921 + -2.7
3,037,921 - -1.0
3,037,929 - -2.3
3,038,035 + MPMX20_02887 0.46 +0.9
3,038,049 - MPMX20_02887 0.54 +0.4
3,038,071 + MPMX20_02887 0.67 -1.0
3,038,071 + MPMX20_02887 0.67 -0.5
3,038,076 + MPMX20_02887 0.70 -2.5
3,038,087 + MPMX20_02887 0.76 -1.0
3,038,156 + -0.2
3,038,235 - MPMX20_02888 0.21 -0.7
3,038,242 + MPMX20_02888 0.23 -0.5
3,038,314 + MPMX20_02888 0.49 -1.3
3,038,327 + MPMX20_02888 0.54 +0.5
3,038,362 + MPMX20_02888 0.67 -0.9
3,038,362 + MPMX20_02888 0.67 -0.8
3,038,369 + MPMX20_02888 0.70 -0.3
3,038,369 + MPMX20_02888 0.70 -0.6
3,038,370 - MPMX20_02888 0.70 -1.7
3,038,370 - MPMX20_02888 0.70 -0.2
3,038,397 - MPMX20_02888 0.80 -1.9
3,038,399 + MPMX20_02888 0.81 -1.5
3,038,407 + MPMX20_02888 0.84 -2.1
3,038,567 - +1.4
3,038,594 + MPMX20_02889 0.13 -0.1
3,038,595 + MPMX20_02889 0.13 +0.4
3,038,624 - MPMX20_02889 0.16 +0.4
3,038,624 - MPMX20_02889 0.16 +0.6
3,038,632 + MPMX20_02889 0.17 -0.5
3,038,640 - MPMX20_02889 0.18 -0.8
3,038,643 + MPMX20_02889 0.18 -0.7
3,038,643 + MPMX20_02889 0.18 -0.9
3,038,643 + MPMX20_02889 0.18 -0.2
3,038,643 + MPMX20_02889 0.18 -0.3
3,038,643 + MPMX20_02889 0.18 -2.2
3,038,650 - MPMX20_02889 0.19 -1.7
3,038,650 - MPMX20_02889 0.19 -0.1
3,038,650 - MPMX20_02889 0.19 -1.2
3,038,651 - MPMX20_02889 0.19 -2.7
3,038,651 - MPMX20_02889 0.19 -0.4
3,038,651 - MPMX20_02889 0.19 -0.4
3,038,651 - MPMX20_02889 0.19 -0.3
3,038,651 - MPMX20_02889 0.19 +0.5
3,038,651 - MPMX20_02889 0.19 -0.1
3,038,651 - MPMX20_02889 0.19 +1.1
3,038,702 + MPMX20_02889 0.25 -5.3
3,038,725 + MPMX20_02889 0.27 -1.0
3,038,732 + MPMX20_02889 0.28 +0.3
3,038,733 - MPMX20_02889 0.28 -0.1
3,038,740 - MPMX20_02889 0.29 -1.0
3,038,778 + MPMX20_02889 0.33 +0.1
3,038,778 + MPMX20_02889 0.33 -1.4
3,038,783 + MPMX20_02889 0.34 -1.2
3,038,786 - MPMX20_02889 0.34 -2.4
3,038,786 - MPMX20_02889 0.34 -1.6
3,038,802 + MPMX20_02889 0.36 -0.0
3,038,805 + MPMX20_02889 0.36 +0.2
3,038,805 - MPMX20_02889 0.36 -1.2
3,038,866 + MPMX20_02889 0.43 -1.2

Or see this region's nucleotide sequence