Experiment: 0.1X LB plate, Mixed culture; Streptomyces sp. SAI_126 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_02505 and MPMX20_02506 overlap by 4 nucleotides MPMX20_02506 and MPMX20_02507 are separated by 35 nucleotides
MPMX20_02505: MPMX20_02505 - putative oxidoreductase YciK, at 2,647,178 to 2,647,939
_02505
MPMX20_02506: MPMX20_02506 - Corrinoid adenosyltransferase, at 2,647,936 to 2,648,526
_02506
MPMX20_02507: MPMX20_02507 - Ribosomal large subunit pseudouridine synthase B, at 2,648,562 to 2,649,437
_02507
Position (kb)
2647
2648
2649 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2646.937 kb on - strand at 2646.937 kb on - strand at 2646.965 kb on + strand at 2646.965 kb on + strand at 2646.965 kb on + strand at 2646.965 kb on + strand at 2646.965 kb on + strand at 2646.965 kb on + strand at 2646.965 kb on + strand at 2646.973 kb on - strand at 2646.973 kb on - strand at 2646.973 kb on - strand at 2646.973 kb on - strand at 2646.973 kb on - strand at 2646.973 kb on - strand at 2646.982 kb on - strand at 2646.983 kb on - strand at 2646.983 kb on - strand at 2646.996 kb on + strand at 2646.999 kb on + strand at 2647.009 kb on + strand at 2647.009 kb on - strand at 2647.032 kb on + strand at 2647.042 kb on + strand at 2647.082 kb on + strand at 2647.082 kb on + strand at 2647.082 kb on + strand at 2647.086 kb on - strand at 2647.090 kb on - strand at 2647.151 kb on + strand at 2647.162 kb on + strand at 2647.162 kb on + strand at 2647.170 kb on - strand at 2647.170 kb on - strand at 2647.170 kb on - strand at 2647.262 kb on + strand, within MPMX20_02505 at 2647.262 kb on + strand, within MPMX20_02505 at 2647.262 kb on + strand, within MPMX20_02505 at 2647.262 kb on + strand, within MPMX20_02505 at 2647.262 kb on + strand, within MPMX20_02505 at 2647.270 kb on - strand, within MPMX20_02505 at 2647.270 kb on - strand, within MPMX20_02505 at 2647.270 kb on - strand, within MPMX20_02505 at 2647.270 kb on - strand, within MPMX20_02505 at 2647.270 kb on - strand, within MPMX20_02505 at 2647.270 kb on - strand, within MPMX20_02505 at 2647.270 kb on - strand, within MPMX20_02505 at 2647.272 kb on + strand, within MPMX20_02505 at 2647.275 kb on - strand, within MPMX20_02505 at 2647.280 kb on - strand, within MPMX20_02505 at 2647.285 kb on - strand, within MPMX20_02505 at 2647.290 kb on + strand, within MPMX20_02505 at 2647.372 kb on + strand, within MPMX20_02505 at 2647.403 kb on + strand, within MPMX20_02505 at 2647.463 kb on + strand, within MPMX20_02505 at 2647.463 kb on + strand, within MPMX20_02505 at 2647.463 kb on + strand, within MPMX20_02505 at 2647.463 kb on + strand, within MPMX20_02505 at 2647.471 kb on - strand, within MPMX20_02505 at 2647.471 kb on - strand, within MPMX20_02505 at 2647.471 kb on - strand, within MPMX20_02505 at 2647.543 kb on + strand, within MPMX20_02505 at 2647.618 kb on + strand, within MPMX20_02505 at 2647.627 kb on - strand, within MPMX20_02505 at 2647.629 kb on + strand, within MPMX20_02505 at 2647.657 kb on - strand, within MPMX20_02505 at 2647.657 kb on - strand, within MPMX20_02505 at 2647.667 kb on - strand, within MPMX20_02505 at 2647.903 kb on + strand at 2647.940 kb on + strand at 2647.992 kb on - strand at 2648.076 kb on - strand, within MPMX20_02506 at 2648.135 kb on - strand, within MPMX20_02506 at 2648.170 kb on + strand, within MPMX20_02506 at 2648.203 kb on + strand, within MPMX20_02506 at 2648.222 kb on - strand, within MPMX20_02506 at 2648.257 kb on + strand, within MPMX20_02506 at 2648.298 kb on + strand, within MPMX20_02506 at 2648.332 kb on - strand, within MPMX20_02506 at 2648.332 kb on - strand, within MPMX20_02506 at 2648.402 kb on - strand, within MPMX20_02506 at 2648.413 kb on + strand, within MPMX20_02506 at 2648.413 kb on + strand, within MPMX20_02506 at 2648.423 kb on - strand, within MPMX20_02506 at 2648.617 kb on - strand at 2648.709 kb on - strand, within MPMX20_02507 at 2648.766 kb on - strand, within MPMX20_02507 at 2648.770 kb on + strand, within MPMX20_02507 at 2648.770 kb on + strand, within MPMX20_02507 at 2648.770 kb on + strand, within MPMX20_02507 at 2648.833 kb on - strand, within MPMX20_02507 at 2648.876 kb on + strand, within MPMX20_02507 at 2648.881 kb on + strand, within MPMX20_02507 at 2648.884 kb on - strand, within MPMX20_02507 at 2648.902 kb on - strand, within MPMX20_02507 at 2648.902 kb on - strand, within MPMX20_02507 at 2648.955 kb on - strand, within MPMX20_02507 at 2648.962 kb on + strand, within MPMX20_02507 at 2648.962 kb on - strand, within MPMX20_02507 at 2649.057 kb on + strand, within MPMX20_02507 at 2649.167 kb on - strand, within MPMX20_02507 at 2649.187 kb on - strand, within MPMX20_02507 at 2649.201 kb on + strand, within MPMX20_02507 at 2649.201 kb on - strand, within MPMX20_02507 at 2649.316 kb on + strand, within MPMX20_02507 at 2649.359 kb on - strand at 2649.416 kb on - strand at 2649.477 kb on + strand at 2649.485 kb on - strand at 2649.489 kb on + strand at 2649.502 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 0.1X LB plate, Mixed culture; Streptomyces sp. SAI_126 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct remove 2,646,937 - -0.1 2,646,937 - +0.5 2,646,965 + +0.4 2,646,965 + -0.2 2,646,965 + +1.9 2,646,965 + -0.5 2,646,965 + -0.1 2,646,965 + +0.3 2,646,965 + -0.1 2,646,973 - +1.5 2,646,973 - +3.5 2,646,973 - -1.1 2,646,973 - -0.3 2,646,973 - +0.9 2,646,973 - -0.7 2,646,982 - +1.0 2,646,983 - -0.2 2,646,983 - -0.4 2,646,996 + -0.9 2,646,999 + +0.5 2,647,009 + -0.2 2,647,009 - -0.4 2,647,032 + +0.9 2,647,042 + +0.2 2,647,082 + -0.6 2,647,082 + -0.1 2,647,082 + -1.5 2,647,086 - +0.9 2,647,090 - +0.9 2,647,151 + +1.0 2,647,162 + -0.5 2,647,162 + +0.6 2,647,170 - -1.5 2,647,170 - +0.5 2,647,170 - -1.5 2,647,262 + MPMX20_02505 0.11 +0.0 2,647,262 + MPMX20_02505 0.11 -1.6 2,647,262 + MPMX20_02505 0.11 +0.3 2,647,262 + MPMX20_02505 0.11 +0.1 2,647,262 + MPMX20_02505 0.11 +0.4 2,647,270 - MPMX20_02505 0.12 -0.5 2,647,270 - MPMX20_02505 0.12 +1.4 2,647,270 - MPMX20_02505 0.12 -0.1 2,647,270 - MPMX20_02505 0.12 -0.1 2,647,270 - MPMX20_02505 0.12 +0.7 2,647,270 - MPMX20_02505 0.12 +1.8 2,647,270 - MPMX20_02505 0.12 +0.9 2,647,272 + MPMX20_02505 0.12 +2.9 2,647,275 - MPMX20_02505 0.13 -0.7 2,647,280 - MPMX20_02505 0.13 -1.6 2,647,285 - MPMX20_02505 0.14 -0.7 2,647,290 + MPMX20_02505 0.15 -0.3 2,647,372 + MPMX20_02505 0.25 +0.9 2,647,403 + MPMX20_02505 0.30 -0.9 2,647,463 + MPMX20_02505 0.37 +0.7 2,647,463 + MPMX20_02505 0.37 +1.4 2,647,463 + MPMX20_02505 0.37 +0.8 2,647,463 + MPMX20_02505 0.37 +0.9 2,647,471 - MPMX20_02505 0.38 -0.7 2,647,471 - MPMX20_02505 0.38 -0.4 2,647,471 - MPMX20_02505 0.38 -0.6 2,647,543 + MPMX20_02505 0.48 -1.2 2,647,618 + MPMX20_02505 0.58 +0.8 2,647,627 - MPMX20_02505 0.59 +0.8 2,647,629 + MPMX20_02505 0.59 +0.2 2,647,657 - MPMX20_02505 0.63 +1.9 2,647,657 - MPMX20_02505 0.63 -0.5 2,647,667 - MPMX20_02505 0.64 +0.3 2,647,903 + +0.5 2,647,940 + +1.4 2,647,992 - -0.9 2,648,076 - MPMX20_02506 0.24 +3.0 2,648,135 - MPMX20_02506 0.34 -1.2 2,648,170 + MPMX20_02506 0.40 +1.2 2,648,203 + MPMX20_02506 0.45 -0.6 2,648,222 - MPMX20_02506 0.48 +1.4 2,648,257 + MPMX20_02506 0.54 -3.3 2,648,298 + MPMX20_02506 0.61 -0.7 2,648,332 - MPMX20_02506 0.67 -0.6 2,648,332 - MPMX20_02506 0.67 -2.5 2,648,402 - MPMX20_02506 0.79 -0.4 2,648,413 + MPMX20_02506 0.81 +0.4 2,648,413 + MPMX20_02506 0.81 -0.9 2,648,423 - MPMX20_02506 0.82 -1.6 2,648,617 - -1.3 2,648,709 - MPMX20_02507 0.17 -0.4 2,648,766 - MPMX20_02507 0.23 -0.9 2,648,770 + MPMX20_02507 0.24 +0.1 2,648,770 + MPMX20_02507 0.24 -0.4 2,648,770 + MPMX20_02507 0.24 -0.2 2,648,833 - MPMX20_02507 0.31 -1.7 2,648,876 + MPMX20_02507 0.36 -1.0 2,648,881 + MPMX20_02507 0.36 +0.0 2,648,884 - MPMX20_02507 0.37 -0.6 2,648,902 - MPMX20_02507 0.39 -1.6 2,648,902 - MPMX20_02507 0.39 -0.4 2,648,955 - MPMX20_02507 0.45 +1.5 2,648,962 + MPMX20_02507 0.46 -0.5 2,648,962 - MPMX20_02507 0.46 -0.5 2,649,057 + MPMX20_02507 0.57 -2.1 2,649,167 - MPMX20_02507 0.69 +0.0 2,649,187 - MPMX20_02507 0.71 +0.9 2,649,201 + MPMX20_02507 0.73 -1.1 2,649,201 - MPMX20_02507 0.73 +2.5 2,649,316 + MPMX20_02507 0.86 +1.9 2,649,359 - -0.4 2,649,416 - -0.9 2,649,477 + +1.9 2,649,485 - +1.9 2,649,489 + +0.5 2,649,502 - -0.6
Or see this region's nucleotide sequence