Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02506

Experiment: 0.1X LB plate, Mixed culture; Streptomyces sp. SAI_126 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02505 and MPMX20_02506 overlap by 4 nucleotidesMPMX20_02506 and MPMX20_02507 are separated by 35 nucleotides MPMX20_02505: MPMX20_02505 - putative oxidoreductase YciK, at 2,647,178 to 2,647,939 _02505 MPMX20_02506: MPMX20_02506 - Corrinoid adenosyltransferase, at 2,647,936 to 2,648,526 _02506 MPMX20_02507: MPMX20_02507 - Ribosomal large subunit pseudouridine synthase B, at 2,648,562 to 2,649,437 _02507 Position (kb) 2647 2648 2649Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 2646.937 kb on - strandat 2646.937 kb on - strandat 2646.965 kb on + strandat 2646.965 kb on + strandat 2646.965 kb on + strandat 2646.965 kb on + strandat 2646.965 kb on + strandat 2646.965 kb on + strandat 2646.965 kb on + strandat 2646.973 kb on - strandat 2646.973 kb on - strandat 2646.973 kb on - strandat 2646.973 kb on - strandat 2646.973 kb on - strandat 2646.973 kb on - strandat 2646.982 kb on - strandat 2646.983 kb on - strandat 2646.983 kb on - strandat 2646.996 kb on + strandat 2646.999 kb on + strandat 2647.009 kb on + strandat 2647.009 kb on - strandat 2647.032 kb on + strandat 2647.042 kb on + strandat 2647.082 kb on + strandat 2647.082 kb on + strandat 2647.082 kb on + strandat 2647.086 kb on - strandat 2647.090 kb on - strandat 2647.151 kb on + strandat 2647.162 kb on + strandat 2647.162 kb on + strandat 2647.170 kb on - strandat 2647.170 kb on - strandat 2647.170 kb on - strandat 2647.262 kb on + strand, within MPMX20_02505at 2647.262 kb on + strand, within MPMX20_02505at 2647.262 kb on + strand, within MPMX20_02505at 2647.262 kb on + strand, within MPMX20_02505at 2647.262 kb on + strand, within MPMX20_02505at 2647.270 kb on - strand, within MPMX20_02505at 2647.270 kb on - strand, within MPMX20_02505at 2647.270 kb on - strand, within MPMX20_02505at 2647.270 kb on - strand, within MPMX20_02505at 2647.270 kb on - strand, within MPMX20_02505at 2647.270 kb on - strand, within MPMX20_02505at 2647.270 kb on - strand, within MPMX20_02505at 2647.272 kb on + strand, within MPMX20_02505at 2647.275 kb on - strand, within MPMX20_02505at 2647.280 kb on - strand, within MPMX20_02505at 2647.285 kb on - strand, within MPMX20_02505at 2647.290 kb on + strand, within MPMX20_02505at 2647.372 kb on + strand, within MPMX20_02505at 2647.403 kb on + strand, within MPMX20_02505at 2647.463 kb on + strand, within MPMX20_02505at 2647.463 kb on + strand, within MPMX20_02505at 2647.463 kb on + strand, within MPMX20_02505at 2647.463 kb on + strand, within MPMX20_02505at 2647.471 kb on - strand, within MPMX20_02505at 2647.471 kb on - strand, within MPMX20_02505at 2647.471 kb on - strand, within MPMX20_02505at 2647.543 kb on + strand, within MPMX20_02505at 2647.618 kb on + strand, within MPMX20_02505at 2647.627 kb on - strand, within MPMX20_02505at 2647.629 kb on + strand, within MPMX20_02505at 2647.657 kb on - strand, within MPMX20_02505at 2647.657 kb on - strand, within MPMX20_02505at 2647.667 kb on - strand, within MPMX20_02505at 2647.903 kb on + strandat 2647.940 kb on + strandat 2647.992 kb on - strandat 2648.076 kb on - strand, within MPMX20_02506at 2648.135 kb on - strand, within MPMX20_02506at 2648.170 kb on + strand, within MPMX20_02506at 2648.203 kb on + strand, within MPMX20_02506at 2648.222 kb on - strand, within MPMX20_02506at 2648.257 kb on + strand, within MPMX20_02506at 2648.298 kb on + strand, within MPMX20_02506at 2648.332 kb on - strand, within MPMX20_02506at 2648.332 kb on - strand, within MPMX20_02506at 2648.402 kb on - strand, within MPMX20_02506at 2648.413 kb on + strand, within MPMX20_02506at 2648.413 kb on + strand, within MPMX20_02506at 2648.423 kb on - strand, within MPMX20_02506at 2648.617 kb on - strandat 2648.709 kb on - strand, within MPMX20_02507at 2648.766 kb on - strand, within MPMX20_02507at 2648.770 kb on + strand, within MPMX20_02507at 2648.770 kb on + strand, within MPMX20_02507at 2648.770 kb on + strand, within MPMX20_02507at 2648.833 kb on - strand, within MPMX20_02507at 2648.876 kb on + strand, within MPMX20_02507at 2648.881 kb on + strand, within MPMX20_02507at 2648.884 kb on - strand, within MPMX20_02507at 2648.902 kb on - strand, within MPMX20_02507at 2648.902 kb on - strand, within MPMX20_02507at 2648.955 kb on - strand, within MPMX20_02507at 2648.962 kb on + strand, within MPMX20_02507at 2648.962 kb on - strand, within MPMX20_02507at 2649.057 kb on + strand, within MPMX20_02507at 2649.167 kb on - strand, within MPMX20_02507at 2649.187 kb on - strand, within MPMX20_02507at 2649.201 kb on + strand, within MPMX20_02507at 2649.201 kb on - strand, within MPMX20_02507at 2649.316 kb on + strand, within MPMX20_02507at 2649.359 kb on - strandat 2649.416 kb on - strandat 2649.477 kb on + strandat 2649.485 kb on - strandat 2649.489 kb on + strandat 2649.502 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction 0.1X LB plate, Mixed culture; Streptomyces sp. SAI_126 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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2,646,937 - -0.1
2,646,937 - +0.5
2,646,965 + +0.4
2,646,965 + -0.2
2,646,965 + +1.9
2,646,965 + -0.5
2,646,965 + -0.1
2,646,965 + +0.3
2,646,965 + -0.1
2,646,973 - +1.5
2,646,973 - +3.5
2,646,973 - -1.1
2,646,973 - -0.3
2,646,973 - +0.9
2,646,973 - -0.7
2,646,982 - +1.0
2,646,983 - -0.2
2,646,983 - -0.4
2,646,996 + -0.9
2,646,999 + +0.5
2,647,009 + -0.2
2,647,009 - -0.4
2,647,032 + +0.9
2,647,042 + +0.2
2,647,082 + -0.6
2,647,082 + -0.1
2,647,082 + -1.5
2,647,086 - +0.9
2,647,090 - +0.9
2,647,151 + +1.0
2,647,162 + -0.5
2,647,162 + +0.6
2,647,170 - -1.5
2,647,170 - +0.5
2,647,170 - -1.5
2,647,262 + MPMX20_02505 0.11 +0.0
2,647,262 + MPMX20_02505 0.11 -1.6
2,647,262 + MPMX20_02505 0.11 +0.3
2,647,262 + MPMX20_02505 0.11 +0.1
2,647,262 + MPMX20_02505 0.11 +0.4
2,647,270 - MPMX20_02505 0.12 -0.5
2,647,270 - MPMX20_02505 0.12 +1.4
2,647,270 - MPMX20_02505 0.12 -0.1
2,647,270 - MPMX20_02505 0.12 -0.1
2,647,270 - MPMX20_02505 0.12 +0.7
2,647,270 - MPMX20_02505 0.12 +1.8
2,647,270 - MPMX20_02505 0.12 +0.9
2,647,272 + MPMX20_02505 0.12 +2.9
2,647,275 - MPMX20_02505 0.13 -0.7
2,647,280 - MPMX20_02505 0.13 -1.6
2,647,285 - MPMX20_02505 0.14 -0.7
2,647,290 + MPMX20_02505 0.15 -0.3
2,647,372 + MPMX20_02505 0.25 +0.9
2,647,403 + MPMX20_02505 0.30 -0.9
2,647,463 + MPMX20_02505 0.37 +0.7
2,647,463 + MPMX20_02505 0.37 +1.4
2,647,463 + MPMX20_02505 0.37 +0.8
2,647,463 + MPMX20_02505 0.37 +0.9
2,647,471 - MPMX20_02505 0.38 -0.7
2,647,471 - MPMX20_02505 0.38 -0.4
2,647,471 - MPMX20_02505 0.38 -0.6
2,647,543 + MPMX20_02505 0.48 -1.2
2,647,618 + MPMX20_02505 0.58 +0.8
2,647,627 - MPMX20_02505 0.59 +0.8
2,647,629 + MPMX20_02505 0.59 +0.2
2,647,657 - MPMX20_02505 0.63 +1.9
2,647,657 - MPMX20_02505 0.63 -0.5
2,647,667 - MPMX20_02505 0.64 +0.3
2,647,903 + +0.5
2,647,940 + +1.4
2,647,992 - -0.9
2,648,076 - MPMX20_02506 0.24 +3.0
2,648,135 - MPMX20_02506 0.34 -1.2
2,648,170 + MPMX20_02506 0.40 +1.2
2,648,203 + MPMX20_02506 0.45 -0.6
2,648,222 - MPMX20_02506 0.48 +1.4
2,648,257 + MPMX20_02506 0.54 -3.3
2,648,298 + MPMX20_02506 0.61 -0.7
2,648,332 - MPMX20_02506 0.67 -0.6
2,648,332 - MPMX20_02506 0.67 -2.5
2,648,402 - MPMX20_02506 0.79 -0.4
2,648,413 + MPMX20_02506 0.81 +0.4
2,648,413 + MPMX20_02506 0.81 -0.9
2,648,423 - MPMX20_02506 0.82 -1.6
2,648,617 - -1.3
2,648,709 - MPMX20_02507 0.17 -0.4
2,648,766 - MPMX20_02507 0.23 -0.9
2,648,770 + MPMX20_02507 0.24 +0.1
2,648,770 + MPMX20_02507 0.24 -0.4
2,648,770 + MPMX20_02507 0.24 -0.2
2,648,833 - MPMX20_02507 0.31 -1.7
2,648,876 + MPMX20_02507 0.36 -1.0
2,648,881 + MPMX20_02507 0.36 +0.0
2,648,884 - MPMX20_02507 0.37 -0.6
2,648,902 - MPMX20_02507 0.39 -1.6
2,648,902 - MPMX20_02507 0.39 -0.4
2,648,955 - MPMX20_02507 0.45 +1.5
2,648,962 + MPMX20_02507 0.46 -0.5
2,648,962 - MPMX20_02507 0.46 -0.5
2,649,057 + MPMX20_02507 0.57 -2.1
2,649,167 - MPMX20_02507 0.69 +0.0
2,649,187 - MPMX20_02507 0.71 +0.9
2,649,201 + MPMX20_02507 0.73 -1.1
2,649,201 - MPMX20_02507 0.73 +2.5
2,649,316 + MPMX20_02507 0.86 +1.9
2,649,359 - -0.4
2,649,416 - -0.9
2,649,477 + +1.9
2,649,485 - +1.9
2,649,489 + +0.5
2,649,502 - -0.6

Or see this region's nucleotide sequence