Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02418

Experiment: 0.1X LB plate, Mixed culture; Streptomyces sp. SAI_126 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02417 and MPMX20_02418 overlap by 4 nucleotidesMPMX20_02418 and MPMX20_02419 are separated by 33 nucleotides MPMX20_02417: MPMX20_02417 - hypothetical protein, at 2,550,990 to 2,553,971 _02417 MPMX20_02418: MPMX20_02418 - hypothetical protein, at 2,553,968 to 2,556,142 _02418 MPMX20_02419: MPMX20_02419 - 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase, at 2,556,176 to 2,556,934 _02419 Position (kb) 2553 2554 2555 2556 2557Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 2553.125 kb on - strand, within MPMX20_02417at 2553.136 kb on + strand, within MPMX20_02417at 2553.136 kb on + strand, within MPMX20_02417at 2553.144 kb on - strand, within MPMX20_02417at 2553.213 kb on - strand, within MPMX20_02417at 2553.234 kb on - strand, within MPMX20_02417at 2553.308 kb on + strand, within MPMX20_02417at 2553.313 kb on + strand, within MPMX20_02417at 2553.441 kb on + strand, within MPMX20_02417at 2553.458 kb on + strand, within MPMX20_02417at 2553.532 kb on - strand, within MPMX20_02417at 2553.549 kb on - strand, within MPMX20_02417at 2553.562 kb on - strand, within MPMX20_02417at 2553.647 kb on - strand, within MPMX20_02417at 2553.738 kb on - strandat 2553.812 kb on + strandat 2553.820 kb on - strandat 2553.882 kb on + strandat 2553.989 kb on + strandat 2553.989 kb on + strandat 2553.997 kb on - strandat 2554.040 kb on - strandat 2554.040 kb on - strandat 2554.040 kb on - strandat 2554.040 kb on - strandat 2554.072 kb on + strandat 2554.080 kb on - strandat 2554.080 kb on - strandat 2554.080 kb on - strandat 2554.089 kb on + strandat 2554.131 kb on + strandat 2554.131 kb on + strandat 2554.131 kb on + strandat 2554.139 kb on - strandat 2554.139 kb on - strandat 2554.139 kb on - strandat 2554.139 kb on - strandat 2554.174 kb on + strandat 2554.226 kb on - strand, within MPMX20_02418at 2554.226 kb on - strand, within MPMX20_02418at 2554.226 kb on - strand, within MPMX20_02418at 2554.263 kb on + strand, within MPMX20_02418at 2554.276 kb on - strand, within MPMX20_02418at 2554.288 kb on + strand, within MPMX20_02418at 2554.291 kb on - strand, within MPMX20_02418at 2554.482 kb on - strand, within MPMX20_02418at 2554.482 kb on - strand, within MPMX20_02418at 2554.530 kb on + strand, within MPMX20_02418at 2554.530 kb on + strand, within MPMX20_02418at 2554.530 kb on + strand, within MPMX20_02418at 2554.538 kb on - strand, within MPMX20_02418at 2554.538 kb on - strand, within MPMX20_02418at 2554.538 kb on - strand, within MPMX20_02418at 2554.538 kb on - strand, within MPMX20_02418at 2554.538 kb on - strand, within MPMX20_02418at 2554.538 kb on - strand, within MPMX20_02418at 2554.596 kb on - strand, within MPMX20_02418at 2554.599 kb on - strand, within MPMX20_02418at 2554.636 kb on + strand, within MPMX20_02418at 2554.644 kb on - strand, within MPMX20_02418at 2554.644 kb on - strand, within MPMX20_02418at 2554.644 kb on - strand, within MPMX20_02418at 2554.644 kb on - strand, within MPMX20_02418at 2554.654 kb on + strand, within MPMX20_02418at 2554.671 kb on + strand, within MPMX20_02418at 2554.683 kb on + strand, within MPMX20_02418at 2554.683 kb on + strand, within MPMX20_02418at 2554.763 kb on + strand, within MPMX20_02418at 2554.771 kb on - strand, within MPMX20_02418at 2554.788 kb on + strand, within MPMX20_02418at 2554.794 kb on + strand, within MPMX20_02418at 2554.796 kb on - strand, within MPMX20_02418at 2554.796 kb on - strand, within MPMX20_02418at 2554.813 kb on - strand, within MPMX20_02418at 2554.813 kb on - strand, within MPMX20_02418at 2554.866 kb on + strand, within MPMX20_02418at 2554.866 kb on - strand, within MPMX20_02418at 2554.898 kb on - strand, within MPMX20_02418at 2554.987 kb on - strand, within MPMX20_02418at 2554.998 kb on - strand, within MPMX20_02418at 2555.027 kb on - strand, within MPMX20_02418at 2555.034 kb on + strand, within MPMX20_02418at 2555.042 kb on - strand, within MPMX20_02418at 2555.112 kb on + strand, within MPMX20_02418at 2555.149 kb on + strand, within MPMX20_02418at 2555.157 kb on - strand, within MPMX20_02418at 2555.161 kb on - strand, within MPMX20_02418at 2555.227 kb on - strand, within MPMX20_02418at 2555.246 kb on - strand, within MPMX20_02418at 2555.280 kb on - strand, within MPMX20_02418at 2555.366 kb on - strand, within MPMX20_02418at 2555.592 kb on + strand, within MPMX20_02418at 2555.592 kb on + strand, within MPMX20_02418at 2555.592 kb on + strand, within MPMX20_02418at 2555.592 kb on + strand, within MPMX20_02418at 2555.600 kb on - strand, within MPMX20_02418at 2555.600 kb on - strand, within MPMX20_02418at 2555.772 kb on - strand, within MPMX20_02418at 2555.827 kb on - strand, within MPMX20_02418at 2555.833 kb on + strand, within MPMX20_02418at 2555.833 kb on + strand, within MPMX20_02418at 2555.841 kb on - strand, within MPMX20_02418at 2555.851 kb on - strand, within MPMX20_02418at 2555.851 kb on - strand, within MPMX20_02418at 2555.888 kb on - strand, within MPMX20_02418at 2556.023 kb on + strandat 2556.029 kb on + strandat 2556.029 kb on + strandat 2556.037 kb on - strandat 2556.058 kb on - strandat 2556.081 kb on - strandat 2556.096 kb on + strandat 2556.096 kb on + strandat 2556.096 kb on + strandat 2556.104 kb on - strandat 2556.104 kb on - strandat 2556.173 kb on - strandat 2556.186 kb on + strandat 2556.186 kb on + strandat 2556.186 kb on + strandat 2556.194 kb on - strandat 2556.196 kb on + strandat 2556.203 kb on + strandat 2556.206 kb on - strandat 2556.242 kb on - strandat 2556.337 kb on + strand, within MPMX20_02419at 2556.342 kb on + strand, within MPMX20_02419at 2556.379 kb on + strand, within MPMX20_02419at 2556.379 kb on + strand, within MPMX20_02419at 2556.379 kb on + strand, within MPMX20_02419at 2556.379 kb on + strand, within MPMX20_02419at 2556.427 kb on + strand, within MPMX20_02419at 2556.463 kb on - strand, within MPMX20_02419at 2556.481 kb on + strand, within MPMX20_02419at 2556.483 kb on + strand, within MPMX20_02419at 2556.491 kb on - strand, within MPMX20_02419at 2556.496 kb on - strand, within MPMX20_02419at 2556.503 kb on + strand, within MPMX20_02419at 2556.620 kb on - strand, within MPMX20_02419at 2556.674 kb on - strand, within MPMX20_02419at 2556.677 kb on + strand, within MPMX20_02419at 2556.677 kb on + strand, within MPMX20_02419at 2556.685 kb on - strand, within MPMX20_02419at 2556.772 kb on + strand, within MPMX20_02419at 2556.772 kb on + strand, within MPMX20_02419at 2556.780 kb on - strand, within MPMX20_02419at 2556.841 kb on - strand, within MPMX20_02419at 2556.890 kb on + strandat 2556.916 kb on - strandat 2557.073 kb on - strandat 2557.074 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction 0.1X LB plate, Mixed culture; Streptomyces sp. SAI_126 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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2,553,125 - MPMX20_02417 0.72 -0.4
2,553,136 + MPMX20_02417 0.72 -0.8
2,553,136 + MPMX20_02417 0.72 +1.2
2,553,144 - MPMX20_02417 0.72 -1.6
2,553,213 - MPMX20_02417 0.75 +1.4
2,553,234 - MPMX20_02417 0.75 +1.7
2,553,308 + MPMX20_02417 0.78 +0.0
2,553,313 + MPMX20_02417 0.78 -0.5
2,553,441 + MPMX20_02417 0.82 -0.6
2,553,458 + MPMX20_02417 0.83 +0.1
2,553,532 - MPMX20_02417 0.85 +0.4
2,553,549 - MPMX20_02417 0.86 +0.5
2,553,562 - MPMX20_02417 0.86 -0.4
2,553,647 - MPMX20_02417 0.89 +0.1
2,553,738 - -1.1
2,553,812 + +0.3
2,553,820 - +0.9
2,553,882 + -0.1
2,553,989 + +1.2
2,553,989 + -0.1
2,553,997 - +0.4
2,554,040 - -0.2
2,554,040 - -0.4
2,554,040 - +0.4
2,554,040 - +0.1
2,554,072 + -1.1
2,554,080 - -0.3
2,554,080 - -0.6
2,554,080 - -0.7
2,554,089 + -2.5
2,554,131 + -0.9
2,554,131 + +0.2
2,554,131 + +0.1
2,554,139 - -0.8
2,554,139 - +0.5
2,554,139 - -0.4
2,554,139 - +1.7
2,554,174 + +1.0
2,554,226 - MPMX20_02418 0.12 -0.3
2,554,226 - MPMX20_02418 0.12 +0.3
2,554,226 - MPMX20_02418 0.12 -0.6
2,554,263 + MPMX20_02418 0.14 +0.1
2,554,276 - MPMX20_02418 0.14 +0.4
2,554,288 + MPMX20_02418 0.15 +0.2
2,554,291 - MPMX20_02418 0.15 +0.6
2,554,482 - MPMX20_02418 0.24 +1.9
2,554,482 - MPMX20_02418 0.24 -0.6
2,554,530 + MPMX20_02418 0.26 +1.3
2,554,530 + MPMX20_02418 0.26 +0.8
2,554,530 + MPMX20_02418 0.26 +0.4
2,554,538 - MPMX20_02418 0.26 +1.6
2,554,538 - MPMX20_02418 0.26 -0.5
2,554,538 - MPMX20_02418 0.26 +0.2
2,554,538 - MPMX20_02418 0.26 -0.6
2,554,538 - MPMX20_02418 0.26 +1.0
2,554,538 - MPMX20_02418 0.26 +0.4
2,554,596 - MPMX20_02418 0.29 +0.0
2,554,599 - MPMX20_02418 0.29 -1.4
2,554,636 + MPMX20_02418 0.31 +1.2
2,554,644 - MPMX20_02418 0.31 -0.6
2,554,644 - MPMX20_02418 0.31 -0.1
2,554,644 - MPMX20_02418 0.31 +0.5
2,554,644 - MPMX20_02418 0.31 +0.8
2,554,654 + MPMX20_02418 0.32 +0.3
2,554,671 + MPMX20_02418 0.32 +0.3
2,554,683 + MPMX20_02418 0.33 -0.1
2,554,683 + MPMX20_02418 0.33 -0.2
2,554,763 + MPMX20_02418 0.37 -0.2
2,554,771 - MPMX20_02418 0.37 -0.0
2,554,788 + MPMX20_02418 0.38 -1.4
2,554,794 + MPMX20_02418 0.38 -1.5
2,554,796 - MPMX20_02418 0.38 -0.4
2,554,796 - MPMX20_02418 0.38 -0.7
2,554,813 - MPMX20_02418 0.39 -0.1
2,554,813 - MPMX20_02418 0.39 -1.2
2,554,866 + MPMX20_02418 0.41 +0.7
2,554,866 - MPMX20_02418 0.41 +0.4
2,554,898 - MPMX20_02418 0.43 +0.2
2,554,987 - MPMX20_02418 0.47 +2.9
2,554,998 - MPMX20_02418 0.47 +0.1
2,555,027 - MPMX20_02418 0.49 -0.5
2,555,034 + MPMX20_02418 0.49 -0.5
2,555,042 - MPMX20_02418 0.49 -0.6
2,555,112 + MPMX20_02418 0.53 +2.1
2,555,149 + MPMX20_02418 0.54 +0.7
2,555,157 - MPMX20_02418 0.55 +0.4
2,555,161 - MPMX20_02418 0.55 -0.1
2,555,227 - MPMX20_02418 0.58 -0.9
2,555,246 - MPMX20_02418 0.59 +1.3
2,555,280 - MPMX20_02418 0.60 -0.6
2,555,366 - MPMX20_02418 0.64 +0.8
2,555,592 + MPMX20_02418 0.75 -0.0
2,555,592 + MPMX20_02418 0.75 -0.6
2,555,592 + MPMX20_02418 0.75 -0.4
2,555,592 + MPMX20_02418 0.75 +0.1
2,555,600 - MPMX20_02418 0.75 +0.6
2,555,600 - MPMX20_02418 0.75 +1.7
2,555,772 - MPMX20_02418 0.83 +0.8
2,555,827 - MPMX20_02418 0.85 -0.1
2,555,833 + MPMX20_02418 0.86 +0.1
2,555,833 + MPMX20_02418 0.86 +0.2
2,555,841 - MPMX20_02418 0.86 +0.7
2,555,851 - MPMX20_02418 0.87 -0.1
2,555,851 - MPMX20_02418 0.87 +0.4
2,555,888 - MPMX20_02418 0.88 +0.9
2,556,023 + -2.8
2,556,029 + +0.6
2,556,029 + -0.2
2,556,037 - +0.2
2,556,058 - -1.2
2,556,081 - -1.4
2,556,096 + +0.3
2,556,096 + +0.2
2,556,096 + +0.9
2,556,104 - -0.6
2,556,104 - -0.4
2,556,173 - -2.1
2,556,186 + -0.6
2,556,186 + -0.7
2,556,186 + -1.1
2,556,194 - +0.8
2,556,196 + +0.9
2,556,203 + -0.5
2,556,206 - -0.5
2,556,242 - +0.7
2,556,337 + MPMX20_02419 0.21 -0.3
2,556,342 + MPMX20_02419 0.22 -2.5
2,556,379 + MPMX20_02419 0.27 +1.9
2,556,379 + MPMX20_02419 0.27 +0.9
2,556,379 + MPMX20_02419 0.27 -2.0
2,556,379 + MPMX20_02419 0.27 -2.4
2,556,427 + MPMX20_02419 0.33 -1.1
2,556,463 - MPMX20_02419 0.38 +0.3
2,556,481 + MPMX20_02419 0.40 +0.1
2,556,483 + MPMX20_02419 0.40 -1.0
2,556,491 - MPMX20_02419 0.42 -0.2
2,556,496 - MPMX20_02419 0.42 +0.3
2,556,503 + MPMX20_02419 0.43 -1.2
2,556,620 - MPMX20_02419 0.58 +1.9
2,556,674 - MPMX20_02419 0.66 -0.4
2,556,677 + MPMX20_02419 0.66 -0.5
2,556,677 + MPMX20_02419 0.66 +0.1
2,556,685 - MPMX20_02419 0.67 -0.1
2,556,772 + MPMX20_02419 0.79 -0.6
2,556,772 + MPMX20_02419 0.79 -0.3
2,556,780 - MPMX20_02419 0.80 -0.5
2,556,841 - MPMX20_02419 0.88 -0.0
2,556,890 + -0.3
2,556,916 - -0.3
2,557,073 - -0.5
2,557,074 - -0.6

Or see this region's nucleotide sequence