Experiment: 0.1X LB plate, Mixed culture; Streptomyces sp. SAI_126 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_01755 and MPMX20_01756 are separated by 20 nucleotides MPMX20_01756 and MPMX20_01757 are separated by 11 nucleotides MPMX20_01757 and MPMX20_01758 are separated by 57 nucleotides
MPMX20_01755: MPMX20_01755 - Flagellar hook protein FlgE, at 1,845,962 to 1,847,170
_01755
MPMX20_01756: MPMX20_01756 - Flagellar basal-body rod protein FlgF, at 1,847,191 to 1,847,946
_01756
MPMX20_01757: MPMX20_01757 - Flagellar basal-body rod protein FlgG, at 1,847,958 to 1,848,740
_01757
MPMX20_01758: MPMX20_01758 - Flagellar L-ring protein, at 1,848,798 to 1,849,496
_01758
Position (kb)
1847
1848 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1846.225 kb on + strand, within MPMX20_01755 at 1846.243 kb on - strand, within MPMX20_01755 at 1846.243 kb on - strand, within MPMX20_01755 at 1846.245 kb on + strand, within MPMX20_01755 at 1846.293 kb on - strand, within MPMX20_01755 at 1846.343 kb on + strand, within MPMX20_01755 at 1846.343 kb on + strand, within MPMX20_01755 at 1846.351 kb on - strand, within MPMX20_01755 at 1846.361 kb on - strand, within MPMX20_01755 at 1846.438 kb on - strand, within MPMX20_01755 at 1846.472 kb on - strand, within MPMX20_01755 at 1846.482 kb on - strand, within MPMX20_01755 at 1846.528 kb on + strand, within MPMX20_01755 at 1846.542 kb on + strand, within MPMX20_01755 at 1846.582 kb on + strand, within MPMX20_01755 at 1846.590 kb on - strand, within MPMX20_01755 at 1846.592 kb on + strand, within MPMX20_01755 at 1846.650 kb on + strand, within MPMX20_01755 at 1846.651 kb on - strand, within MPMX20_01755 at 1846.667 kb on + strand, within MPMX20_01755 at 1846.675 kb on - strand, within MPMX20_01755 at 1846.707 kb on + strand, within MPMX20_01755 at 1846.768 kb on - strand, within MPMX20_01755 at 1846.884 kb on + strand, within MPMX20_01755 at 1846.890 kb on - strand, within MPMX20_01755 at 1846.891 kb on - strand, within MPMX20_01755 at 1846.931 kb on + strand, within MPMX20_01755 at 1846.931 kb on + strand, within MPMX20_01755 at 1846.939 kb on - strand, within MPMX20_01755 at 1846.970 kb on - strand, within MPMX20_01755 at 1846.972 kb on + strand, within MPMX20_01755 at 1846.972 kb on + strand, within MPMX20_01755 at 1846.990 kb on + strand, within MPMX20_01755 at 1847.026 kb on + strand, within MPMX20_01755 at 1847.093 kb on - strand at 1847.103 kb on - strand at 1847.155 kb on + strand at 1847.182 kb on - strand at 1847.189 kb on - strand at 1847.222 kb on + strand at 1847.247 kb on + strand at 1847.301 kb on + strand, within MPMX20_01756 at 1847.301 kb on + strand, within MPMX20_01756 at 1847.309 kb on - strand, within MPMX20_01756 at 1847.309 kb on - strand, within MPMX20_01756 at 1847.348 kb on + strand, within MPMX20_01756 at 1847.366 kb on - strand, within MPMX20_01756 at 1847.366 kb on - strand, within MPMX20_01756 at 1847.482 kb on + strand, within MPMX20_01756 at 1847.482 kb on + strand, within MPMX20_01756 at 1847.490 kb on - strand, within MPMX20_01756 at 1847.503 kb on + strand, within MPMX20_01756 at 1847.541 kb on - strand, within MPMX20_01756 at 1847.554 kb on + strand, within MPMX20_01756 at 1847.585 kb on + strand, within MPMX20_01756 at 1847.585 kb on - strand, within MPMX20_01756 at 1847.593 kb on - strand, within MPMX20_01756 at 1847.593 kb on - strand, within MPMX20_01756 at 1847.598 kb on - strand, within MPMX20_01756 at 1847.687 kb on - strand, within MPMX20_01756 at 1847.706 kb on + strand, within MPMX20_01756 at 1847.743 kb on + strand, within MPMX20_01756 at 1847.751 kb on - strand, within MPMX20_01756 at 1847.751 kb on - strand, within MPMX20_01756 at 1847.751 kb on - strand, within MPMX20_01756 at 1847.820 kb on + strand, within MPMX20_01756 at 1847.828 kb on - strand, within MPMX20_01756 at 1848.110 kb on + strand, within MPMX20_01757 at 1848.171 kb on - strand, within MPMX20_01757 at 1848.370 kb on - strand, within MPMX20_01757 at 1848.438 kb on - strand, within MPMX20_01757 at 1848.438 kb on - strand, within MPMX20_01757 at 1848.438 kb on - strand, within MPMX20_01757 at 1848.449 kb on + strand, within MPMX20_01757 at 1848.449 kb on + strand, within MPMX20_01757 at 1848.507 kb on - strand, within MPMX20_01757 at 1848.522 kb on - strand, within MPMX20_01757 at 1848.527 kb on + strand, within MPMX20_01757 at 1848.527 kb on - strand, within MPMX20_01757 at 1848.571 kb on + strand, within MPMX20_01757 at 1848.586 kb on + strand, within MPMX20_01757 at 1848.605 kb on + strand, within MPMX20_01757 at 1848.632 kb on - strand, within MPMX20_01757 at 1848.704 kb on - strand at 1848.734 kb on + strand at 1848.734 kb on + strand at 1848.734 kb on + strand at 1848.734 kb on + strand at 1848.742 kb on - strand at 1848.742 kb on - strand at 1848.742 kb on - strand at 1848.742 kb on - strand at 1848.742 kb on - strand at 1848.742 kb on - strand at 1848.742 kb on - strand at 1848.756 kb on + strand at 1848.764 kb on - strand at 1848.858 kb on + strand at 1848.867 kb on - strand at 1848.890 kb on - strand, within MPMX20_01758 at 1848.893 kb on + strand, within MPMX20_01758 at 1848.933 kb on + strand, within MPMX20_01758 at 1848.941 kb on - strand, within MPMX20_01758
Per-strain Table
Position Strand Gene LocusTag Fraction 0.1X LB plate, Mixed culture; Streptomyces sp. SAI_126 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct remove 1,846,225 + MPMX20_01755 0.22 -1.9 1,846,243 - MPMX20_01755 0.23 +1.7 1,846,243 - MPMX20_01755 0.23 +1.2 1,846,245 + MPMX20_01755 0.23 -0.8 1,846,293 - MPMX20_01755 0.27 -0.7 1,846,343 + MPMX20_01755 0.32 +0.3 1,846,343 + MPMX20_01755 0.32 -0.9 1,846,351 - MPMX20_01755 0.32 -0.7 1,846,361 - MPMX20_01755 0.33 -0.0 1,846,438 - MPMX20_01755 0.39 -0.5 1,846,472 - MPMX20_01755 0.42 +0.7 1,846,482 - MPMX20_01755 0.43 -0.3 1,846,528 + MPMX20_01755 0.47 +0.9 1,846,542 + MPMX20_01755 0.48 -0.2 1,846,582 + MPMX20_01755 0.51 +3.3 1,846,590 - MPMX20_01755 0.52 +0.1 1,846,592 + MPMX20_01755 0.52 +0.3 1,846,650 + MPMX20_01755 0.57 +0.6 1,846,651 - MPMX20_01755 0.57 +0.4 1,846,667 + MPMX20_01755 0.58 +1.0 1,846,675 - MPMX20_01755 0.59 +0.4 1,846,707 + MPMX20_01755 0.62 +1.5 1,846,768 - MPMX20_01755 0.67 +2.0 1,846,884 + MPMX20_01755 0.76 -1.0 1,846,890 - MPMX20_01755 0.77 +2.4 1,846,891 - MPMX20_01755 0.77 +1.1 1,846,931 + MPMX20_01755 0.80 +0.8 1,846,931 + MPMX20_01755 0.80 +0.4 1,846,939 - MPMX20_01755 0.81 +0.6 1,846,970 - MPMX20_01755 0.83 +0.3 1,846,972 + MPMX20_01755 0.84 +0.6 1,846,972 + MPMX20_01755 0.84 +1.8 1,846,990 + MPMX20_01755 0.85 +0.8 1,847,026 + MPMX20_01755 0.88 +0.3 1,847,093 - +2.2 1,847,103 - +0.1 1,847,155 + -3.2 1,847,182 - -0.3 1,847,189 - -0.0 1,847,222 + +0.9 1,847,247 + +0.0 1,847,301 + MPMX20_01756 0.15 -0.1 1,847,301 + MPMX20_01756 0.15 +2.8 1,847,309 - MPMX20_01756 0.16 +0.1 1,847,309 - MPMX20_01756 0.16 +1.6 1,847,348 + MPMX20_01756 0.21 +0.9 1,847,366 - MPMX20_01756 0.23 +0.4 1,847,366 - MPMX20_01756 0.23 +0.4 1,847,482 + MPMX20_01756 0.38 +0.0 1,847,482 + MPMX20_01756 0.38 +1.3 1,847,490 - MPMX20_01756 0.40 -0.3 1,847,503 + MPMX20_01756 0.41 -0.7 1,847,541 - MPMX20_01756 0.46 +0.5 1,847,554 + MPMX20_01756 0.48 +0.3 1,847,585 + MPMX20_01756 0.52 +0.3 1,847,585 - MPMX20_01756 0.52 +1.5 1,847,593 - MPMX20_01756 0.53 +2.6 1,847,593 - MPMX20_01756 0.53 +0.3 1,847,598 - MPMX20_01756 0.54 +2.3 1,847,687 - MPMX20_01756 0.66 -2.1 1,847,706 + MPMX20_01756 0.68 +0.1 1,847,743 + MPMX20_01756 0.73 +2.9 1,847,751 - MPMX20_01756 0.74 -1.3 1,847,751 - MPMX20_01756 0.74 +1.3 1,847,751 - MPMX20_01756 0.74 -1.1 1,847,820 + MPMX20_01756 0.83 +0.3 1,847,828 - MPMX20_01756 0.84 -2.0 1,848,110 + MPMX20_01757 0.19 +0.0 1,848,171 - MPMX20_01757 0.27 +0.9 1,848,370 - MPMX20_01757 0.53 -0.5 1,848,438 - MPMX20_01757 0.61 -1.5 1,848,438 - MPMX20_01757 0.61 -0.5 1,848,438 - MPMX20_01757 0.61 -0.7 1,848,449 + MPMX20_01757 0.63 +1.1 1,848,449 + MPMX20_01757 0.63 +0.2 1,848,507 - MPMX20_01757 0.70 +0.2 1,848,522 - MPMX20_01757 0.72 +1.0 1,848,527 + MPMX20_01757 0.73 -1.6 1,848,527 - MPMX20_01757 0.73 +0.5 1,848,571 + MPMX20_01757 0.78 -0.6 1,848,586 + MPMX20_01757 0.80 +0.3 1,848,605 + MPMX20_01757 0.83 +0.6 1,848,632 - MPMX20_01757 0.86 +0.0 1,848,704 - +2.3 1,848,734 + +1.1 1,848,734 + +1.3 1,848,734 + +0.5 1,848,734 + +0.4 1,848,742 - +0.8 1,848,742 - -1.1 1,848,742 - -0.7 1,848,742 - +0.8 1,848,742 - +0.6 1,848,742 - -0.0 1,848,742 - -0.8 1,848,756 + +2.9 1,848,764 - +0.5 1,848,858 + +0.9 1,848,867 - -0.5 1,848,890 - MPMX20_01758 0.13 -0.1 1,848,893 + MPMX20_01758 0.14 +0.3 1,848,933 + MPMX20_01758 0.19 +0.3 1,848,941 - MPMX20_01758 0.20 +1.3
Or see this region's nucleotide sequence